Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212634419

GI number:

Start: 1619587

End: 1621797

Strand: Direct

Name: Not Available

Synonym: swp_1574

Alternate gene names: NA

Gene position: NA

Preceding gene: 212634418

Following gene: 212634420

Centisome position: NA

GC content: NA

Gene sequence:

>2211_bases
TTGGATTATATTAACGCTATGAGCAGTAATACCCCCTTTCAAGCAAACCAGTCACAGCCGTTACCCCAAAGCAATTCTAA
TGGTGATATTGATTTAGGAAAGTTATTTGGCATATTACTCGACGCTCGCTGGTTAATTATTGCAGTAACGTCACTATTCA
CAACAATCGGTGTGATCTACGCGCTATTGGCTACGCCAGTGTATAAAGCTGATGCATTGATCCAAGTTGAACAAAAAAGT
AGCGGTATGTCAGCGCTGGTCGGTGACATGGGTGATATGTTTTCCAGTGAGTCTTCGGCAACCACCGAAGTTGAAATTAT
AAAATCAAGGATGGTGTTAGGCAAAACCGTAGACAAATTAAACCTAACCACTTTAGCACAGCCTCAATACTTAGCCGTTA
TTGGTAAAGGGCTGAGTAGACTCACGGGTGAATCAAATGCCATCAAAATTAGTCGTTTTCAAACGCCTAATAATACTGTA
GCGAATTTTATTCTGAGTGTTGATGATAGCGCCAAAGGTGCATATACACTTTATAATCAAGAAGGCCGAAAAGTATTAGC
CGGCTTAGTTGGCGAGCTAGCGACTAAAGGTGACTATAGCTTGTTTGTTCAGCAGCTAGTGGGCAGCAAGGGTGATGAGT
TTGCAGTTAGTAAACGCTCAAAACTGGATGCTATACAGTGGTTACAAAAAAATCTCAGTGTAAGTGAGCGTGGCAAGCAA
ACGGGCATACTGCAGTTGTCTTTTGCGGGCGAAGAAAAACAGCTGATTGAAGAGATTCTTAATAATGTAAGTGAGAACTA
TTTTCTACAAAATGTGGCTAGAGACTCGGCGGAAGCGCAAAAAAGTTTAAATTTTCTGCAAAGTCATTTGCCAAGTATAA
AAACTGAATTAACCGACTACGAAGACACGCTTAATCGTTACCGTCAAGACAATGACTCAATAGACTTAGGCTTAGAAGCG
CAATCAACCCTAAAAGTCATGGTAGAGCTTGAGGCGCAATTAAACGAGTTAACCTTTAAAGAGAGTGAAATTAGCCAGCG
CTTTACTAAAGACCATCCAGCTTATAAATCTTTGCTAGATAAACGTCAGGTTTTACTTGCTGAAAAAGAGCGCCTAAACA
GGCGAGTACAACAGTTACCGAAAACACAACGTGAAGTGCTCCGCATGACGCGCGATGTTGAAGTCAATCAACAAATATAT
ATTCAATTACTGAATAAAGTACAAGAGCTAAGTATCTTAAAAGCTGGCACGGTAGGCAATGTACGCATACTCGACAAGGC
GCAATCCTATTCACAGGCGATAAAACCTAAAAAGCCACTTATTGTTGTACTCGCAACACTTTTAGGCGCCATGCTGGCAA
TTGCTGTTGTATTAGTTAAAGCTGCACTACATAAAGGCATCGAAAACCCAGACGAAATCGAAGCAATAGGCTTAGCAGTT
TATGCCAGCATTCCTTTATCTGAGTCGCAAAATACTATTGATGAGAAATATAAAAGAAACAGACATAGAAGTAAACGACA
GGTCAGTGAATCATTATTAGCTGAATTTAACCCTGCTGACTTATCTATTGAGGCATTACGCGGTCTTAGAACCAGTATGC
ATTTTGCCATGATGGAAGCGAAAAATAATGTGGTGATGATTTCAGGCGCCTCACCAGAAATCGGTAAGTCATTTATATCA
GCCAATTTTGCAGCTGTTATCGCTAAAAGCGGTCAAAAGGTACTAGTAATAGATGGTGACATGCGCAAAGGATACCTTCA
GCGGCACTTTAATCTTGACTGGGATAATGGGCTTTCAGAGTTCCTATCTGGCAAATTACCAGCGGAAAGCGTTATTAAAA
AATCAGGTATAGAAAACCTAGATGTAATTACCCGTGGCCAAGTGCCACCGAACCCCTCTGAACTGCTCATGAACCCACGC
TTAGCGAGCTTTTTTGAGTGGGCATCAAGTGAATACGATCTAGTGATTATTGATACACCGCCAGTATTAGCGGTGACAGA
CCCAAGTATTGTTGGTGCTATCGCAGGCACAACCTTAATGGTAGGCCGCTTTGGACTAAACACAGTCAAAGAGATTGACG
TTGCACGTAACCGCTTTGACATTGCCGGCGTTGAAGTCAAAGGCTTTATTCTCAATGCGGTAGAGAAAAAAGCGAGCGCA
TCATATGGCTATGGTTACTATAACTACAGTTATGAAAGTGATAAAAAATAG

Upstream 100 bases:

>100_bases
CAAACATTAATTAGGTATATACCCCCAGCTTAAACAAAATAAATGTAGGCCACCTACCAATATAATAATGACCAAGTGCG
CCACTTATTAAAGACATAAT

Downstream 100 bases:

>100_bases
AATAACTAATTATTAGATTAGGCTAGTGCGTAGCCTAATCAACCGATTTAAAGAAAGCTGTGAATACAAGGGACGGCGCT
ATATCCAGGTCTAATCATGG

Product: capsular polysaccharide biosynthesis chain length regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>736_residues
MDYINAMSSNTPFQANQSQPLPQSNSNGDIDLGKLFGILLDARWLIIAVTSLFTTIGVIYALLATPVYKADALIQVEQKS
SGMSALVGDMGDMFSSESSATTEVEIIKSRMVLGKTVDKLNLTTLAQPQYLAVIGKGLSRLTGESNAIKISRFQTPNNTV
ANFILSVDDSAKGAYTLYNQEGRKVLAGLVGELATKGDYSLFVQQLVGSKGDEFAVSKRSKLDAIQWLQKNLSVSERGKQ
TGILQLSFAGEEKQLIEEILNNVSENYFLQNVARDSAEAQKSLNFLQSHLPSIKTELTDYEDTLNRYRQDNDSIDLGLEA
QSTLKVMVELEAQLNELTFKESEISQRFTKDHPAYKSLLDKRQVLLAEKERLNRRVQQLPKTQREVLRMTRDVEVNQQIY
IQLLNKVQELSILKAGTVGNVRILDKAQSYSQAIKPKKPLIVVLATLLGAMLAIAVVLVKAALHKGIENPDEIEAIGLAV
YASIPLSESQNTIDEKYKRNRHRSKRQVSESLLAEFNPADLSIEALRGLRTSMHFAMMEAKNNVVMISGASPEIGKSFIS
ANFAAVIAKSGQKVLVIDGDMRKGYLQRHFNLDWDNGLSEFLSGKLPAESVIKKSGIENLDVITRGQVPPNPSELLMNPR
LASFFEWASSEYDLVIIDTPPVLAVTDPSIVGAIAGTTLMVGRFGLNTVKEIDVARNRFDIAGVEVKGFILNAVEKKASA
SYGYGYYNYSYESDKK

Sequences:
NA

Specific function: NA

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA