Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 212634402

GI number:

Start: 1600942

End: 1603716

Strand: Direct

Name: Not Available

Synonym: swp_1557

Alternate gene names: NA

Gene position: NA

Preceding gene: 212634401

Following gene: 212634403

Centisome position: NA

GC content: NA

Gene sequence:

>2775_bases
GTGTTACATAAAACCAAAAAGATTGTCATCGCAGGTGCTAGTGCATTGCTCCTATTATGCGGGCAAGTGCAAGCAGTAAC
TCCGTCTCCGCAGATGATTGAGCAGTTTAAAAACTTACCGGCGTCAGAGCAGCAGCGCTTAGCTAAACAATATGGCATTG
ATCCTTCAATGCTAGGTGGTAGTAGTGGCTCACAACAGCAATTAGAAAACCCACAAGTGGTTAACTCTCGTGCTGAGTAT
GATCGTAACGGAAACTTGATTCCAAACTCTAGCCAAAATCCGAACTTCTCAAATAACCCTAATAAAGAGAAAGAGCTTAC
CTTTGAAGAGGACGCGGCAAAAACTGAACTTCAGCGATTTGGTTATGATCTGTTTGCTGGCGAACCGACGACTTTTGCCC
CCGTATCTGACGTGCCAGTGCCGAGCGAATACTTAGTTGGTCCAGGAGATAACATCAAGGTTCAGTTATATGGCAAAGAA
AACAAAGAGTATGACTTAGTCATTAACCGCGAAGGAGTGATTCAGTTTCCAGAGCTTGGGCCCGTTAATGTATCAGGGCT
AAGCTTTAGCGAATTGAGAGCATCTTTATCGCAGCGCATTAAGAAGCAGATGATTGGTATAGAGTCGAATATCACTATGG
GGGAGCTTCGCTCGATCCGTATTTTTGTTGCTGGCGATGCCTATAAGCCTGGCTCATATACCGTTTCTAGTCTTTCGACA
ATCACTCAAGCACTTTTTGTTGCTGGTGGCGTCAATGAAATTGGTTCACTGCGTAATATTCAAGTGAAGCGCAATGGTAA
GCTAGTTGGCGCAATGGATTTGTATGACCTTTTACTACGCGGGGATGCATCTGGTGATATTCGTTTACGTTCTGGTGACG
TAGTGTTTATCCCATCGGTTGGTGGACTTGTAAGTGTTACCGGCGAAGTCAGACGCCCTGCTATTTATGAACTTAAGAAA
CACGAAACAATGGCGCAAGTCATTGAGATGGCGGCTGGCGTTAAACCAGGCGCTTATCCAAAGCGTAGTAGTGTAGAGCG
CTTTAACAAAAACAGTCTTAGAACGATAGTAAACGTAGATTTAACATCAGAAGCTGGTAAGAACACTAAAGCACTTGCTG
GTGATGTCATTCGAGTCAAAAATGCCACTTCGCAATACGAAGATGCGCTCACCGTTGTTGGCGCCGTTGTTCGACCAGGC
AAATACCAATGGTTTGAAGGACAAAAAATTAGCGATCTTGTACCTTCCATATGGGGTGACTTAACTGTTTCTGCAGATTT
GGAATACGCAGTTGTTGTACGTGAAATGAATAAACAGGGAGATATTCAGGTTTATCAGTTCTCACCATCAAAGGCGATAA
ACGGCAAAGTACTTTCTGAAAACCTTACGTTGGCTCCTCGAGATAAAATCATTTTCTTCAATTTTAGCGATATGACCCAA
AATCGATATGAGCTAAATAAATTAGTAAAAGAGCGAGTAGAAAAGGTGCAGTCATTGGCCGGTGACTCACTTATCGGTAA
TGATCTATTTAAGGCGGGTTTCTCTCAATTAAATCAACAGAAATTTGCTGACCGAGCTGAACTTGGTGGCATTGCCATTA
ATAGTAAAGCCGAAGAGGATGAAAGTACGGCGATAAAAGGCGAGGTCAACAAAATGTTGGTAAACCTTTTTGAAGATAGG
GATTTGATAAAGTTAAGCAGCGTGATGAACCGCGGTGAGTTACTTTACCCCGTCATTATGAAGTTAAACAGTCAAGGCCG
AGCGGGGACTGGCGTCCAAGCTGTTGCGATTAACGGCAAAGTAAATAACCCTGGTATTTACCCTCTGGCGGTTAATGCCA
GAGTACAAGACTTAGTGGTTGCAGCAGGTGGACTAGAAGAAGGCGCTTACACAACGCGCGCGGAACTGACTAGTACACAT
ACAACCATCGATGGTTCTTCAATTAGTCACAAAAACATTGCATTAGATGTTGCTCTTCAAGGTGATGTTTCGCAAAACCT
GTTGCTCAAAGGTCGCGACATTCTTACTGTAATGACAACGCCAGATTGGCAAGAAAATAAGTCAGTTGAAATACGCGGAG
AAGTGAAGTTCCCAGGCACTTATAACATTCGCCGTGGAGAAACATTAGGTGATGTGCTTACCCGTGCGGGCGGCTTTACC
GAATATGCATACTTACCTTCAACCGTTTTTGTACGGGAATCTGTGCGTCAACAAGAACAGTTAGAGATTAAAAAGCTTGC
TGACCAACTTCGCCGTGATATCGCCACACGTGGTGTATCAAAAGACGGTAACGTCGTAAATTACAGCGATGCTCAGATGA
TGCTTACTGATCTTGAGACTATCCAAGCAGTAGGTCGATTAGTGGTTGATCTCTCAGCAATTTCAATTGGTATCTCCCAG
GCAGATCTTCAGCTTGAAGACAAAGACGTACTTTACATCCCATCGACCAAGCAAACTATTGCGGTAATGGGGGAAGTGCA
ACATGCCGCTACACATAGATTTAAAGAAGGTCAAACTGTCGACCAATACCTAGCGATGTCTGGTGGTGCTCGAGAGCGTG
CTGATGATGATAGAACTTATATCATTAAAGCGGATGGTTCTGTAATGCTTCCAAACAAATCTATGTGGTTTAGCAGTGAG
TCTAATTTGCAGCCAGGCGATACTATCATCGTGCCACTCGATACTGAGTACAAAGACAACCTAACACTCTGGACACAAGT
CACCAGCATCATATACAACACAGCAGTCGCGTTTGCTACTGTTGCCAACCTTTAA

Upstream 100 bases:

>100_bases
ATATGTCGATCACGTCATATTATAATTAGATATATCGATTAGCTTTAGTTGTTTTAATCAATATTATTGTTTCTTTATTT
TTGTTTGGAGATAAAACTCG

Downstream 100 bases:

>100_bases
AAGGTGACTTGAGAGAATTAGGCTCAATCCTAAAGCTTAAGATTTAGCCTAATAAACAGGGAAGGTGCCTTGGTGTAATT
ATACGCATTTCAAGATTAAG

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>924_residues
MLHKTKKIVIAGASALLLLCGQVQAVTPSPQMIEQFKNLPASEQQRLAKQYGIDPSMLGGSSGSQQQLENPQVVNSRAEY
DRNGNLIPNSSQNPNFSNNPNKEKELTFEEDAAKTELQRFGYDLFAGEPTTFAPVSDVPVPSEYLVGPGDNIKVQLYGKE
NKEYDLVINREGVIQFPELGPVNVSGLSFSELRASLSQRIKKQMIGIESNITMGELRSIRIFVAGDAYKPGSYTVSSLST
ITQALFVAGGVNEIGSLRNIQVKRNGKLVGAMDLYDLLLRGDASGDIRLRSGDVVFIPSVGGLVSVTGEVRRPAIYELKK
HETMAQVIEMAAGVKPGAYPKRSSVERFNKNSLRTIVNVDLTSEAGKNTKALAGDVIRVKNATSQYEDALTVVGAVVRPG
KYQWFEGQKISDLVPSIWGDLTVSADLEYAVVVREMNKQGDIQVYQFSPSKAINGKVLSENLTLAPRDKIIFFNFSDMTQ
NRYELNKLVKERVEKVQSLAGDSLIGNDLFKAGFSQLNQQKFADRAELGGIAINSKAEEDESTAIKGEVNKMLVNLFEDR
DLIKLSSVMNRGELLYPVIMKLNSQGRAGTGVQAVAINGKVNNPGIYPLAVNARVQDLVVAAGGLEEGAYTTRAELTSTH
TTIDGSSISHKNIALDVALQGDVSQNLLLKGRDILTVMTTPDWQENKSVEIRGEVKFPGTYNIRRGETLGDVLTRAGGFT
EYAYLPSTVFVRESVRQQEQLEIKKLADQLRRDIATRGVSKDGNVVNYSDAQMMLTDLETIQAVGRLVVDLSAISIGISQ
ADLQLEDKDVLYIPSTKQTIAVMGEVQHAATHRFKEGQTVDQYLAMSGGARERADDDRTYIIKADGSVMLPNKSMWFSSE
SNLQPGDTIIVPLDTEYKDNLTLWTQVTSIIYNTAVAFATVANL

Sequences:
NA

Specific function: NA

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA