| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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The map label for this gene is carB
Identifier: 212634060
GI number:
Start: 1206721
End: 1209942
Strand: Direct
Name: carB
Synonym: swp_1202
Alternate gene names: NA
Gene position: NA
Preceding gene: 212634059
Following gene: 212634061
Centisome position: NA
GC content: NA
Gene sequence:
>3222_bases ATGCCAAAACGTACCGATATAAAGAGTATTCTTATCCTAGGTGCTGGACCAATTGTTATTGGTCAAGCCTGTGAGTTTGA CTACTCAGGCGCTCAAGCCTGTAAAGCCCTACGCGAAGAAGGTTACCGAGTTATACTTGTTAACTCTAACCCTGCAACCA TTATGACTGATCCAGAGATGGCCGATGCAACCTATATCGAGCCTATTCACTGGGAAGTTGTACGCAACATTATTGCTAAA GAGCGCCCTGACGCGATCTTACCGACAATGGGCGGCCAGACTGCACTTAACTGTGCGTTAGAGCTAGAAAGCCGTGGCGT ACTAAAAGAGTTTAATGTCGATATGATTGGCGCAACTGCCGATGCAATCGATAAAGCCGAAGACCGTAGCCGTTTTGACA AAGCAATGAAGTCAATTGGTCTTGAGTGTCCTCGCGCTGGTATCGCTCATAACATGGATGAAGCACGTGCTGTTTTAGCT GAAGTTGGCTACCCATGTATTATTCGCCCATCATTTACCATGGGCGGTAGTGGTGGCGGTATCGCATATAACAAAGAAGA GTTTGAGGATATCTGTTCTCAAGGTCTTGAACTTTCGCCTACCAGCGAGCTGCTTATCGACGAATCTTTGATTGGTTGGA AAGAGTACGAGATGGAAGTGGTCCGTGACTGTAACGATAACTGTATTATCGTTTGTGCAATCGAAAACTTCGATCCAATG GGCGTGCACACGGGTGATTCTATTACCGTGGCTCCTGCACAAACATTGACGGATAAAGAGTACCAACTGATGCGTAATGC ATCACTTGCAGTACTGCGCGAAATCGGTGTTGAAACCGGTGGTTCAAACGTACAGTTTGGTATCAACCCGAAAGATGGCC GTATGGTTATCATCGAGATGAACCCACGTGTATCTCGCTCATCTGCGTTAGCCTCTAAAGCAACCGGCTTCCCAATCGCT AAGATTGCAGCCAAGCTTGCGGTTGGCTTCACCCTTGATGAGTTAAGCAACGATATTACTGGTGGTGCTACACCTGCATC ATTTGAGCCAGCAATTGATTATGTTGTGACTAAGATCCCTCGTTTTAACTTTGAAAAGTTTGCCGGTTCAAATGACCGTC TCACCACGCAGATGAAATCTGTGGGTGAAGTCATGGCGATTGGTCGTACTTTCCAAGAGTCACTGCAAAAAGCGCTGCGC GGTCTTGAAGTTGGTAAGAAGGGGCTTTGCCCAGAAATCGATATCACCGAAACCGATGCTATGTCACGTATTCGCCATGA GCTTAAAGAGCCTGGCGCTGAGCGAATTTGGTATATCGCAGATGCATTCCGTAGCGGTTTGTCGGTGGATGATATTTTTG CGCTGACCAATATCGACCCTTGGTTCCTTGTGCAGCTTGAAGACTTGCTGAAGAGCGAAGCTCAAGTGGCTGAAGCCGGT CTTGCTGGTTTGAATGCGGACGTATTACGTAAACTTAAGCGTAAAGGTTTTGCTGATTCACGTTTAGCAATATTGGCGGG TGTAAGCGAATCGGAGGTGCGTAAACTACGTACCCGTTTCGAAATACACCCAGTATACAAGCGCGTAGATACTTGTGCGG CTGAGTTCTCAACTGATACTGCTTACATGTACTCTACTTATGAAGAAGAGTGTGAAGCGAACCCATCAGACCGTGACAAA ATCATGGTACTGGGCGGCGGGCCAAACAGGATTGGCCAAGGTATCGAGTTCGATTACTGTTGTGTTCACGCGGCATTAGC GCTACGTGAAGACGGCTTTGAAACCATCATGGTTAACTGTAACCCTGAAACTGTTTCAACCGATTATGATACTTCAGACC GTCTGTACTTTGAGTCAATCACCTTTGAAGACGTGCTTGAAATTGTCCGTATCGAGAAGCCAAAAGGCGTTATCGTGCAG TACGGTGGTCAAACACCACTTAAACTTGCACGTGACTTAGAAGCTGCTGGCGTACCGATTATTGGTACTAGCCCTGATGC GATTGACCGCGCTGAAGATCGCGAGCGTTTCCAGCAAGCGATTGAGCGTTTAGGCATGAAGCAGCCAGAAAACGATACTG TGACAACGGTTGAAGGTGCGGTTATCTCTGCTGAGCGTATTGGTTATCCGCTAGTTGTTCGCCCATCTTATGTATTAGGT GGCCGCGCAATGGAGATCGTCTATGACGAGCAAGACTTACGTCGCTACTTTAATGAAGCGGTAAGTGTATCGAATGCCTC TCCTGTATTGCTTGACCGTTTCCTTGATAATGCCATCGAAATTGATATCGATGCAGTATGTGACGGTGAAACCGTCGTGA TTGGTTCTATCATGGAGCATATCGAGCAAGCGGGCGTTCACTCTGGTGACTCTGGTTGTTCACTACCGCCATATAGCTTA AGCCAAGATATTCAAGATCGCATGCGTGAGCAAGTGGGCAAGCTTGCAATGGAGCTCGGTGTTATTGGTCTAATGAACGT ACAGTTTGCGGTGAAGGATAACGAGATCTACATGATTGAAGTTAACCCTCGAGCAGCCCGTACAGTGCCATTTGTATCGA AAGCAACAGGTGTACCGTTAGCTAAGATTGCAGCTCGAGTGATGGCTGGTCAAAGCCTTAAATCACAGAACTTCACACAG GAAGTTATTCCGCCATTCTACTCTGTAAAAGAAGTCGTATTGCCGTTTAACAAGTTCCCAGGTGTTGATCCACTGCTTGG CCCAGAAATGCGCTCAACCGGTGAAGTGATGGGCGTTGGTGATACGTTTGCTGAGGCTTATGCTAAAGCGCAGTTAGGTG CAACATCTGAAGTGCCTAAGTCTGGACGCGCACTTTTATCTGTGCGTAACAGTGATAAAGCGCGAGTTGCAGATTTGGCG GCTAAGTTGATTGAACTTGGTTACGAAATCGATGCGACACATGGCACCGCTGTTATTTTAGGTGAAGCGGGGATTAATCC TCGTCTAGTCAATAAGGTACACGAAGGTCGTCCTCATATTCTTGACCGCATTAAGAATGATGAGTACACCTACATAGTGA ACACCACTGAAGGTCGTAAGGCGATTGAAGATTCACGTCAACTTCGCCGCGGTGCACTGCGTTATAAGGTGAACTACACC ACGACATTGAACGCTGCTTTTGCAACATGCATGGCGCATGCTGCAGATGACCGTTCAAATGTAAGCTCAGTACAAGAGCT TCATAAACGCATTACTAAGTAA
Upstream 100 bases:
>100_bases CCACACGATGCTGCGCCGCTGTTTAATCACTTCATCGATTTGATTGAACTGTATCGTCAGAATGCCAAGTAGTAAATTCA TCCGGGAGAAGATTTAAGCA
Downstream 100 bases:
>100_bases CGCTTAGTGCTGTTTTGCTAAAAAGGCCGCATTGCGCGGCCTTTTTTTATGCGTGCGTAATGTCCGTGGCAACGAGTTGA AACAAAGAGATGGGCTTTAT
Product: carbamoyl phosphate synthase large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1073_residues MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRNIIAK ERPDAILPTMGGQTALNCALELESRGVLKEFNVDMIGATADAIDKAEDRSRFDKAMKSIGLECPRAGIAHNMDEARAVLA EVGYPCIIRPSFTMGGSGGGIAYNKEEFEDICSQGLELSPTSELLIDESLIGWKEYEMEVVRDCNDNCIIVCAIENFDPM GVHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMNPRVSRSSALASKATGFPIA KIAAKLAVGFTLDELSNDITGGATPASFEPAIDYVVTKIPRFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGKKGLCPEIDITETDAMSRIRHELKEPGAERIWYIADAFRSGLSVDDIFALTNIDPWFLVQLEDLLKSEAQVAEAG LAGLNADVLRKLKRKGFADSRLAILAGVSESEVRKLRTRFEIHPVYKRVDTCAAEFSTDTAYMYSTYEEECEANPSDRDK IMVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNCNPETVSTDYDTSDRLYFESITFEDVLEIVRIEKPKGVIVQ YGGQTPLKLARDLEAAGVPIIGTSPDAIDRAEDRERFQQAIERLGMKQPENDTVTTVEGAVISAERIGYPLVVRPSYVLG GRAMEIVYDEQDLRRYFNEAVSVSNASPVLLDRFLDNAIEIDIDAVCDGETVVIGSIMEHIEQAGVHSGDSGCSLPPYSL SQDIQDRMREQVGKLAMELGVIGLMNVQFAVKDNEIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKSQNFTQ EVIPPFYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALLSVRNSDKARVADLA AKLIELGYEIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNDEYTYIVNTTEGRKAIEDSRQLRRGALRYKVNYT TTLNAAFATCMAHAADDRSNVSSVQELHKRITK
Sequences:
NA
Specific function: NA
COG id: COG0458
COG function: function code EF; Carbamoylphosphate synthase large subunit (split gene in MJ)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA