| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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Identifier: 212633910
GI number:
Start: 1056407
End: 1059541
Strand: Direct
Name: Not Available
Synonym: swp_1045
Alternate gene names: NA
Gene position: NA
Preceding gene: 212633909
Following gene: 212633911
Centisome position: NA
GC content: NA
Gene sequence:
>3135_bases ATGGCACATTATTTTGTTAATCGCCCAGTTTTTGCCTGTGTGATCTCTATTGTCATCGTGCTGCTAGGACTGATCTCGAT GTTCCAATTACCCATTGATCAATATCCCTATATCACCCCACCTCAGGTCAAAATATCAGCATCCTATCCCGGAGCGACAT CAACCACAGCTGCGGAATCTGTGGCCACGCCGTTAGAGCAAGAGCTAAATGGGTTGCCAAATATGATCTACATGAGCTCC AAGAGCACTAACTCTGGTAGTTCAAATGTTACGATTACCTTTGATGTTGGCACAAACCCTGACCTTGCTGCGGTTGATGC ACAAAACTCTACCCAGCAAGCAACTGGAAGCTTACCCATCGATGTACAAACCGAAGGTGTATCAGTGTCTAAAGAGGCTT CCGTAGAGTTACTTAAGTTAGCGCTTACCTCCGAAGATGAACGGTATGATGAGATATACCTCAGTAATTATGCCACCATA AATATTCAGTCTGCATTAAAGCGAATTCCTGGTGTTGGCCGTGTTCGAAATACTGGTGCGCGTAGCTACTCAATGAGAAT CTGGTTAAATCCAGATACTATGGCGGGCTACGGGCTGACAACGACTGATGTCATTGACGCAATTAAAGCTCAAAACAAAG AGTCACCCGCTGGCAGCATCGGCTCACAACCTAATGCTGACACCTTAAGTATGACCTTACCTATCACCGCCGCTGGGCGG ATGAGCAGTGTACCGCAGTTTAACGAAATTATTGTGCGGGCAAACTCTGATGGCTCAATAATACGTCTGCGTGATATTGC GAAAGTTGAACTAGGTTCATCAGCTTACACTCTACAATCTCAGCTTAATGGTAATAATGCGACTATTTTACAGGTGTATT TATTGCCAGGTGCTAATGCGCTCGAAGTCACGAAAAAAGTCAAAGCTGAGATGGCTAAATTGTCACAAAAATTCCCTCAA GGGATGAATTGGGAAGTCTTTTTTGATGCCTCAGTATTTATCGAGAACTCTATCGAGGAGGTCGTTAAAACACTGATTGA AGCATTGGTGCTGGTAATCGTTGTAGTATTTCTGTTTCTACAAAATCTTCGGGCCACCTTAATACCAACCATTGCAGTGC CAGTTTCGTTAATTGGTACCTTAGCGGCAATGCTAGCCTTTGGCTTTACCATCAATACTGTCAGTTTATTAGCGCTAGTA CTGGCTATCGGTATCGTTGTTGATGATGCTATTGTCGTCGTTGAAAATGTTGAACGGCTAATGCATGAAAATGGGTTAAG TCCCGCAGAGGCAACTAAGGTCGCGATGAAGGAGCTTTCTGGGGCACTGGTCGCAACCAGTTTAGTGCTTGCCGCTGTAT TTGTGCCCGTCTCTTTCTTATCTGGGATCACCGGTATCATGTACCGTGAGTTTGCCGTTGCCATCACGGTTGCGGTACTG ATTTCTACCGTGGTTGCACTGACGCTATCTCCAGCATTATGTGCGCTATTACTTAAACCCGATGACAAAGCAACGTCAGG CCTTTTCAAATGGATTAATGACCGCTTAGACACGTTAACTAGCAAGTATGTGGGATTAGTTGTATTGACCAATAAGCATG CAAAACGCAGTTACTTAATGTTTGCACTGATGGTGGGCGGCGTGTATCTGATCATGAGCTCTTTACCGTCGAGCTTTATG CCGGATGAAGATCAAGGGCGATTCTTTATTGATGCGTCATTACCTAATGGCGCTACCGTTAATCGTACTCAAGATGTGCT TAAAAAAGCTGAAGCGATAGTGCTTGCTCACCCTGCGGTAGCGTACTCATTTACCTTAGCGGGCGAAAATAGGCGCTCTG GCTCAAATCAAGCTAATGGCCAGTTTGAGATTATCCTTAAGCCTTGGTCTGAACGCGCCGAAAATGATGCCACGGTACAA AAAGTGATGAATGATATTAAGCAGGATTTACATGATGTACTAGAGGCCGAATTTAAAATTTACTTGCCCTCAGCTGTACC GGGTCTAGGAAATGGCTCTGGTGTTGAAATGGAGCTGCAAGATACCTCTGGTAGCAACTTTAAAGGATTAATGGAAACGG CTGACGAGCTGGTGGAAGCCCTTAAATTACAGCCAGAAATCGCCACTGCTGGATTGTCATTACAATCGGCGATCCCAAAA CTGCATTTGAGCGTTGATGAAGCGAAAGCGATGGCAATTGGGGTTAAGGTGGCCGATATTTATGGCACAATTAAAACCTT CACAGACTCATCGACGGTCAATGACTTTAACCTTTTTGGCCGTGTATATCGTGTAAAAGTACAAGCAGAAGATCAGTTTA GGCAATTTCCAGATCAAATTGAGGATTATCATGTCCGCTCTGCGTCTGGAGCTATGGTGCCTATTGGTGTTATGGCCAAA TATGATTACTCTGTCGGACCCGCATCAATCACTCATTACAATATGTTCACCAGTGCCTCGATCAATGCTTCTCCTGCGTC TGGTTATGCTTCGGGCGATGTTATCAAAGCGATCGAACGTGTGGCTAAACCAATGCTGCCTGATGAATTTAGCTATGAGT GGACGGGTATAACCTACCAAGAGGTTCAGTCGGCCAACCAAACTGCCATTGCAGTGACCCTTGCGATGCTGTTTGTCTTT CTTTTTTTGGCGGCACTTTATGAAAGTTGGACTTTACCGATTGCAGTGTTGCTTATCGCACCTATTGCCATGTTAGGTGC CTCACTGGGGACCCTCATTAGCGGAATGGAGAGTAATCTCTTTTTCCAAGTTGCCTTTATCGCACTTATCGGCATGGCTG CTAAGAACTCAATTTTGATTGTTGAGTTTGCCAATCAGTTACATCAAGAGGGTAAGAGTCGCTTAGACTCTGCAATTGAG GCTGCCAATATGCGCTTTAGGCCAATTTTAATGACCTCGCTAGCTTTCATTCTTGGGGTGCTGCCACTGGTACTCTCTGT CGGTCCTGGTGCGGTTAGTAGACAAAGCATCTCTATCCCGATTCTTTGTGGGATGATATTCGCGACGACTGTTGGCATTG TATTGGTTCCTCTCTTTTTTGTGACGACCGCAGGCTGGGTACGATCCAAAATCAGCGACAAAGCGGTTACCGCGGAGGTT GCTACTCATGCCTAA
Upstream 100 bases:
>100_bases AACCGTTAACCGCTGAGCAGTACTATTTGAAAGAGGATATTAAGCAGAAAGAGCAAGCGTTAAAACAGCAAGAGCTAGAG CAGGAACAGGAGGAAAACTA
Downstream 100 bases:
>100_bases TTTAACCAAGCAATGGCAGAGTGCAGTGGCAGGTAACTTACTGTCAGCCTATTTGAAAGCGTTTAAACTCAAGGGAATTG CATTGAGTACCGTCTCTGGC
Product: aminoglycoside efflux pump
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1044_residues MAHYFVNRPVFACVISIVIVLLGLISMFQLPIDQYPYITPPQVKISASYPGATSTTAAESVATPLEQELNGLPNMIYMSS KSTNSGSSNVTITFDVGTNPDLAAVDAQNSTQQATGSLPIDVQTEGVSVSKEASVELLKLALTSEDERYDEIYLSNYATI NIQSALKRIPGVGRVRNTGARSYSMRIWLNPDTMAGYGLTTTDVIDAIKAQNKESPAGSIGSQPNADTLSMTLPITAAGR MSSVPQFNEIIVRANSDGSIIRLRDIAKVELGSSAYTLQSQLNGNNATILQVYLLPGANALEVTKKVKAEMAKLSQKFPQ GMNWEVFFDASVFIENSIEEVVKTLIEALVLVIVVVFLFLQNLRATLIPTIAVPVSLIGTLAAMLAFGFTINTVSLLALV LAIGIVVDDAIVVVENVERLMHENGLSPAEATKVAMKELSGALVATSLVLAAVFVPVSFLSGITGIMYREFAVAITVAVL ISTVVALTLSPALCALLLKPDDKATSGLFKWINDRLDTLTSKYVGLVVLTNKHAKRSYLMFALMVGGVYLIMSSLPSSFM PDEDQGRFFIDASLPNGATVNRTQDVLKKAEAIVLAHPAVAYSFTLAGENRRSGSNQANGQFEIILKPWSERAENDATVQ KVMNDIKQDLHDVLEAEFKIYLPSAVPGLGNGSGVEMELQDTSGSNFKGLMETADELVEALKLQPEIATAGLSLQSAIPK LHLSVDEAKAMAIGVKVADIYGTIKTFTDSSTVNDFNLFGRVYRVKVQAEDQFRQFPDQIEDYHVRSASGAMVPIGVMAK YDYSVGPASITHYNMFTSASINASPASGYASGDVIKAIERVAKPMLPDEFSYEWTGITYQEVQSANQTAIAVTLAMLFVF LFLAALYESWTLPIAVLLIAPIAMLGASLGTLISGMESNLFFQVAFIALIGMAAKNSILIVEFANQLHQEGKSRLDSAIE AANMRFRPILMTSLAFILGVLPLVLSVGPGAVSRQSISIPILCGMIFATTVGIVLVPLFFVTTAGWVRSKISDKAVTAEV ATHA
Sequences:
NA
Specific function: NA
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA