| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is mas [H]
Identifier: 21244986
GI number: 21244986
Start: 5036843
End: 5037856
Strand: Reverse
Name: mas [H]
Synonym: XAC4269
Alternate gene names: 21244986
Gene position: 5037856-5036843 (Counterclockwise)
Preceding gene: 21244987
Following gene: 21244984
Centisome position: 97.34
GC content: 67.75
Gene sequence:
>1014_bases TTGCACCACGGGCGTCGCCGGCAGGAGACTTGCATGCGCGCAGCCATCCACACCCGGTACGGCGACCCGGCCAAGGTGCT CGAACTTGGCGAACGGCCCACACCGCAACCCGGCAAGGGCCAGGTCCGCATCGCGATGCGGCGTTCGCCCATCCACAACC ATGACCTGTGGACGGTGCGCGGCAACTACGGCTACAAGCCCACATTGCCGGCGATCGGCGGCAGCGAAGGCTCTGGCGTG ATCGATGCGCTGGGCGAAGGCGTCCAGGGCCTGCAGGTCGGCCAGCGCGTCGTCGCTGCCGGCGTACACGAGAGCTGGGC CGACTCCTTTCTGGCCGAGGCGACCGGCGTGGTCCCACTGCCCGATGCACTGGATGACGACCGTGGCTGCCAGCTCACCG CCATGCCGCTGAGCGCATTGATGCTGATCGAGTTCCTGCATGTCGAGAAAGGCGACTGGATCGTGCAGAACACCGCCAAC GGCGCGGTTGGCAAGACCGTCGCCATGCTCGCGGCGGCACGCGGCGTCAACGTGATCAATCTGGTGCGTCGCGATGCCGG CGTGGACGAACTCGAGGCACTGGGCATCGGCAATGCGGTGTCGACCGCGCAAGACGGTTGGCAGGACCGCGTGCGCGCGC TGGCCGGCGATGCGCCGATCGTGCGCGCGATCGACTCGGTCGCCGGCAAGGCAGCAGGCGAGCTGATGAGGTTGCTGGCC GAAGGCGGCGAGTTGATCTCGTTCGGCTCGATGACCGGCGAACCGCTGGAGATTGCCAGTGGCGATGTGATCTTCAAGCA GGCCACAGTGCGCGGCTTCTGGGGCAGCAAGGTCATGGCCGCCACCAAGTCCGAGGACAAGCGCCGCATGATCGGCGAGC TGTTGAAGGCCGCGCTCGACGGCAGCCTGGCACTGCCGGTGGAAGCGGTGTTCGACCTGGAAGACGCGGCCAAGGCGGCA GCGGCCAGTGCCGAGCCAGGGCGAGGCGGCAAGATCCTGTTGCGCGCAGGTTGA
Upstream 100 bases:
>100_bases CGAGACGCCGGCCGCCTTCACGCAGCGGTTCCGTTCGTTTCATCGGGCACTTCCAGCACTCCCGTTAGCATCGCAGCACC TTTCACTGTGATCGGCTGCG
Downstream 100 bases:
>100_bases GCCGCCGCAGCCGACGGGCACAATCACACGCAGCATCGTCGAAAGCCAGGCAGTCAACCTTGTGTAGGAGCGCGCCCGAG CGCGACGAAGCTTTCCCGAG
Product: nuclear receptor-binding factor-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MHHGRRRQETCMRAAIHTRYGDPAKVLELGERPTPQPGKGQVRIAMRRSPIHNHDLWTVRGNYGYKPTLPAIGGSEGSGV IDALGEGVQGLQVGQRVVAAGVHESWADSFLAEATGVVPLPDALDDDRGCQLTAMPLSALMLIEFLHVEKGDWIVQNTAN GAVGKTVAMLAAARGVNVINLVRRDAGVDELEALGIGNAVSTAQDGWQDRVRALAGDAPIVRAIDSVAGKAAGELMRLLA EGGELISFGSMTGEPLEIASGDVIFKQATVRGFWGSKVMAATKSEDKRRMIGELLKAALDGSLALPVEAVFDLEDAAKAA AASAEPGRGGKILLRAG
Sequences:
>Translated_337_residues MHHGRRRQETCMRAAIHTRYGDPAKVLELGERPTPQPGKGQVRIAMRRSPIHNHDLWTVRGNYGYKPTLPAIGGSEGSGV IDALGEGVQGLQVGQRVVAAGVHESWADSFLAEATGVVPLPDALDDDRGCQLTAMPLSALMLIEFLHVEKGDWIVQNTAN GAVGKTVAMLAAARGVNVINLVRRDAGVDELEALGIGNAVSTAQDGWQDRVRALAGDAPIVRAIDSVAGKAAGELMRLLA EGGELISFGSMTGEPLEIASGDVIFKQATVRGFWGSKVMAATKSEDKRRMIGELLKAALDGSLALPVEAVFDLEDAAKAA AASAEPGRGGKILLRAG >Mature_337_residues MHHGRRRQETCMRAAIHTRYGDPAKVLELGERPTPQPGKGQVRIAMRRSPIHNHDLWTVRGNYGYKPTLPAIGGSEGSGV IDALGEGVQGLQVGQRVVAAGVHESWADSFLAEATGVVPLPDALDDDRGCQLTAMPLSALMLIEFLHVEKGDWIVQNTAN GAVGKTVAMLAAARGVNVINLVRRDAGVDELEALGIGNAVSTAQDGWQDRVRALAGDAPIVRAIDSVAGKAAGELMRLLA EGGELISFGSMTGEPLEIASGDVIFKQATVRGFWGSKVMAATKSEDKRRMIGELLKAALDGSLALPVEAVFDLEDAAKAA AASAEPGRGGKILLRAG
Specific function: Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids [H]
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI67078404, Length=330, Percent_Identity=31.5151515151515, Blast_Score=159, Evalue=2e-39, Organism=Homo sapiens, GI67078406, Length=296, Percent_Identity=31.0810810810811, Blast_Score=141, Evalue=7e-34, Organism=Homo sapiens, GI24308257, Length=254, Percent_Identity=29.1338582677165, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI194239674, Length=283, Percent_Identity=25.4416961130742, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI13236495, Length=283, Percent_Identity=25.4416961130742, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17536829, Length=314, Percent_Identity=29.9363057324841, Blast_Score=137, Evalue=6e-33, Organism=Caenorhabditis elegans, GI17556000, Length=333, Percent_Identity=27.9279279279279, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17507255, Length=208, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6319500, Length=317, Percent_Identity=21.7665615141956, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI45550423, Length=309, Percent_Identity=30.0970873786408, Blast_Score=147, Evalue=9e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR000794 - InterPro: IPR011032 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR020843 - InterPro: IPR013968 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF08240 ADH_N; PF00107 ADH_zinc_N; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: =2.3.1.111 [H]
Molecular weight: Translated: 35432; Mature: 35432
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHGRRRQETCMRAAIHTRYGDPAKVLELGERPTPQPGKGQVRIAMRRSPIHNHDLWTVR CCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEE GNYGYKPTLPAIGGSEGSGVIDALGEGVQGLQVGQRVVAAGVHESWADSFLAEATGVVPL CCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC PDALDDDRGCQLTAMPLSALMLIEFLHVEKGDWIVQNTANGAVGKTVAMLAAARGVNVIN CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHH LVRRDAGVDELEALGIGNAVSTAQDGWQDRVRALAGDAPIVRAIDSVAGKAAGELMRLLA HHHHCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH EGGELISFGSMTGEPLEIASGDVIFKQATVRGFWGSKVMAATKSEDKRRMIGELLKAALD CCCCEEEECCCCCCCEEECCCCEEEEEHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHC GSLALPVEAVFDLEDAAKAAAASAEPGRGGKILLRAG CCCCCCHHHHHCHHHHHHHHHCCCCCCCCCEEEEECC >Mature Secondary Structure MHHGRRRQETCMRAAIHTRYGDPAKVLELGERPTPQPGKGQVRIAMRRSPIHNHDLWTVR CCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEE GNYGYKPTLPAIGGSEGSGVIDALGEGVQGLQVGQRVVAAGVHESWADSFLAEATGVVPL CCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC PDALDDDRGCQLTAMPLSALMLIEFLHVEKGDWIVQNTANGAVGKTVAMLAAARGVNVIN CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHH LVRRDAGVDELEALGIGNAVSTAQDGWQDRVRALAGDAPIVRAIDSVAGKAAGELMRLLA HHHHCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH EGGELISFGSMTGEPLEIASGDVIFKQATVRGFWGSKVMAATKSEDKRRMIGELLKAALD CCCCEEEECCCCCCCEEECCCCEEEEEHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHC GSLALPVEAVFDLEDAAKAAAASAEPGRGGKILLRAG CCCCCCHHHHHCHHHHHHHHHCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1527058; 12788972 [H]