| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244983
Identifier: 21244983
GI number: 21244983
Start: 5034781
End: 5035413
Strand: Reverse
Name: 21244983
Synonym: XAC4266
Alternate gene names: NA
Gene position: 5035413-5034781 (Counterclockwise)
Preceding gene: 21244984
Following gene: 21244982
Centisome position: 97.29
GC content: 43.92
Gene sequence:
>633_bases TTGTTCCGTTGGACGATTGAGCAGCGTTCTCGTCTTATCGAATCGATTGTGCTAGGGCTGCCCATTCCTCCGATCTTCTT AATAGAGGGTCAGTCGGGTATTCTTGAGTTGATTGATGGACTGCAGAGAACAAGTTCCGTTCTGCAGTTTTTGGATCACG GCGCTATTAACGAGCCAGAACTTAGGCTTGCAGGTTGCGACATAGTTAATGAACTGAATTCAAAAGTATTTTCGGAACTG CCTTTAACTGTGCGGTTGAAGATAAAAAGGTCTCCAATTAGAGCAACCATCATTAATAAGTCGGGTGATGCTTTCGTAAA ATATGAAATGTTTAAAAGGCTTAATACCGGCGGCTCCCTGCTATCGTCTCAAGAGATTCGGAATTGTAGCTCCCGTATGG TCGAGGGCGGAGATCTATTTTATGATGCTATACAAGAGATGGCCAAGTATCCATCTTTTGTGAAAGCCATACAGCGTCTT CTGATACTTTCAGAGAGAAGCGCGCTGATGAGGAGCTGGTCCTTAGGTTTTTCGCCGTTACGCTATTCCGTGACCATTAC CATGGAAACATTGAGGAGTGGCTCGATTCAATTATGGAATCGATATTGTTCAGAAAGGTCGAATTCGATTTGA
Upstream 100 bases:
>100_bases GGATAGGGAAATCAGAACAACGGCAGTAGACTTTTCTTTTGGAGAGCTGCTCAATTTGCATAATACTAAATAAATAATTA TTCGCCCAGAATATCAGCGG
Downstream 100 bases:
>100_bases CAAGTCAAAAGGCCTCGTTTGAGAAAGTGTTCGACCTTATCGCAGAGAAGCTTGGAGATAGCGCATTTACAAGATTCACA GAAGACGGAGTGTCAACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MFRWTIEQRSRLIESIVLGLPIPPIFLIEGQSGILELIDGLQRTSSVLQFLDHGAINEPELRLAGCDIVNELNSKVFSEL PLTVRLKIKRSPIRATIINKSGDAFVKYEMFKRLNTGGSLLSSQEIRNCSSRMVEGGDLFYDAIQEMAKYPSFVKAIQRL LILSERSALMRSWSLGFSPLRYSVTITMETLRSGSIQLWNRYCSERSNSI
Sequences:
>Translated_210_residues MFRWTIEQRSRLIESIVLGLPIPPIFLIEGQSGILELIDGLQRTSSVLQFLDHGAINEPELRLAGCDIVNELNSKVFSEL PLTVRLKIKRSPIRATIINKSGDAFVKYEMFKRLNTGGSLLSSQEIRNCSSRMVEGGDLFYDAIQEMAKYPSFVKAIQRL LILSERSALMRSWSLGFSPLRYSVTITMETLRSGSIQLWNRYCSERSNSI >Mature_210_residues MFRWTIEQRSRLIESIVLGLPIPPIFLIEGQSGILELIDGLQRTSSVLQFLDHGAINEPELRLAGCDIVNELNSKVFSEL PLTVRLKIKRSPIRATIINKSGDAFVKYEMFKRLNTGGSLLSSQEIRNCSSRMVEGGDLFYDAIQEMAKYPSFVKAIQRL LILSERSALMRSWSLGFSPLRYSVTITMETLRSGSIQLWNRYCSERSNSI
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23837; Mature: 23837
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRWTIEQRSRLIESIVLGLPIPPIFLIEGQSGILELIDGLQRTSSVLQFLDHGAINEPE CCEECHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC LRLAGCDIVNELNSKVFSELPLTVRLKIKRSPIRATIINKSGDAFVKYEMFKRLNTGGSL EEEEHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCH LSSQEIRNCSSRMVEGGDLFYDAIQEMAKYPSFVKAIQRLLILSERSALMRSWSLGFSPL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE RYSVTITMETLRSGSIQLWNRYCSERSNSI EEEEEEEEHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MFRWTIEQRSRLIESIVLGLPIPPIFLIEGQSGILELIDGLQRTSSVLQFLDHGAINEPE CCEECHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC LRLAGCDIVNELNSKVFSELPLTVRLKIKRSPIRATIINKSGDAFVKYEMFKRLNTGGSL EEEEHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCH LSSQEIRNCSSRMVEGGDLFYDAIQEMAKYPSFVKAIQRLLILSERSALMRSWSLGFSPL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE RYSVTITMETLRSGSIQLWNRYCSERSNSI EEEEEEEEHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA