| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244863
Identifier: 21244863
GI number: 21244863
Start: 4873345
End: 4874838
Strand: Reverse
Name: 21244863
Synonym: XAC4146
Alternate gene names: NA
Gene position: 4874838-4873345 (Counterclockwise)
Preceding gene: 21244864
Following gene: 21244862
Centisome position: 94.19
GC content: 61.65
Gene sequence:
>1494_bases ATGTCCGCGACCGAAGCCGCACTGGCCACCCGTAGCATCGAAACAACCGAGCGGGGCGACTTTGCCGCGCTGCTCAATCG CGAGTTCCGTCCCAAGAGCGAGCGCGCCAAGGAAGAAGTGGAATCGGCGGTGCGCACGCTCGCCGAGCAGGTGCTCAACC GCAGCGATGTGGTTGGCGAAGACGTATCGCAGACCATCAAGGCCTACATCGCCGAGATCGACCGCACGCTCACCGAACAG CTCAACCAGATCCTGCATCACGCCGATCTGCAACAGCTCGAAGGCGCCTGGCGCGGCCTGCATTATCTGGTCAACAACAC CGAGACCGACCAGCAGCTCAAGATCCGCGTGCTGAATATCAGCAAGAAAGAGTTGGGCAAGGTACTCAAACGCTACAAGG GTACCGCGTGGGATCAGAGCCCCATCTTCAAGAAAGTCTACGAACAGGAATATGGCCAGCTTGGCGGCGAGCCGTATGGG TGCCTGGTCGGCGATTATTACTTCGACCAGAGTCCGCCGGATGTGGAACTGCTCAACGGTATTGCGCAGGTGGCCGCTGC CGCGCACGCACCGTTCATTGCCGCCGCCGCGCCCAAATTGATGGGCATGGACAACTGGAGCGAGCTCTCCAATCCGCGCG ATCTGGCCAAGATTTTTTCCACGCCCGATTACGCTGCATGGCGCTCGCTGCGCGAATCCGAAGACTCCAAGTACATCGGT CTGGCCATGCCGCGCACGCTCTCGCGTCTACCTTACGGCGCGGCCACCAGCCCGGTGGAAGACTTCGATTTCGAGGAAGA CACCGCCGGCGCGGATTCCAACAAGTACACCTGGCAGAATGCCGCCTATGCGATGGCGGTGAACATCAACCGCTCGTTCA AGCAGTACGGCTGGTGCTCGCGCATTCGCGGTATCGAGTCCGGCGGCGCAGTGGAAGGGTTGCCCACGCATACCTTTCCC ACCGACGACGGTGGCGTGGACATGAAGTGCCCGACCGAAGTGGCGATCACCGACCGTCGCTCCGCCGAACTGGACAAGAT GGGCCTCATGCCGCTGGTACATCGCAAGAACTCGGACATGGCCGCCTTCATCAGCGCGCAGTCGCTCAACAAGCCCGACG AATACGACGACCCGGATGCCACCGCCAACGCAGCATTAGGCGCGCGCCTGCCCTACATGTTTGCGTGCTGCCGCTTTGCG CACTACCTCAAGTGCATCGTGCGCGACAAGATCGGTTCGTTCTCCGATCGCGAGCAGATGCAGAGCTGGCTGACACGCTG GGTGACGCAATACATCGACGGCGACCCGTCCAACTCCAGCGAAGAAACCAAGGCGCGCAAGCCGCTGGCTGCCGCCGAAG TGGTGGTGGAAGAAGTGGAAGGCGCGCCTGGCTACTACAGCTCCAAGTTCTTCCTCAAGCCGCATTACCAGCTGGAGGGC CTGACCGTGTCGTTGCGGTTGGTCTCGCGGTTGCCCTCGGCCGCCAAGGCCTGA
Upstream 100 bases:
>100_bases TGCAGAGCAGCTGATCGCCAACGCTATCCGCGATCCGGCGTTGCTGCAGTCGCTGGTGTCGGCCGGCAAGCCCGCGTCCG AACCGGAAGGAACCTGAGCC
Downstream 100 bases:
>100_bases TCCGACGCATCTGCGTCATGGCGAGGACGTCTTCGCGTCGCGCCACCTCGTGTTGTCACTCTCATTGAAGGAGCAGTTCC ATGGCGTTCGACATGCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MSATEAALATRSIETTERGDFAALLNREFRPKSERAKEEVESAVRTLAEQVLNRSDVVGEDVSQTIKAYIAEIDRTLTEQ LNQILHHADLQQLEGAWRGLHYLVNNTETDQQLKIRVLNISKKELGKVLKRYKGTAWDQSPIFKKVYEQEYGQLGGEPYG CLVGDYYFDQSPPDVELLNGIAQVAAAAHAPFIAAAAPKLMGMDNWSELSNPRDLAKIFSTPDYAAWRSLRESEDSKYIG LAMPRTLSRLPYGAATSPVEDFDFEEDTAGADSNKYTWQNAAYAMAVNINRSFKQYGWCSRIRGIESGGAVEGLPTHTFP TDDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNSDMAAFISAQSLNKPDEYDDPDATANAALGARLPYMFACCRFA HYLKCIVRDKIGSFSDREQMQSWLTRWVTQYIDGDPSNSSEETKARKPLAAAEVVVEEVEGAPGYYSSKFFLKPHYQLEG LTVSLRLVSRLPSAAKA
Sequences:
>Translated_497_residues MSATEAALATRSIETTERGDFAALLNREFRPKSERAKEEVESAVRTLAEQVLNRSDVVGEDVSQTIKAYIAEIDRTLTEQ LNQILHHADLQQLEGAWRGLHYLVNNTETDQQLKIRVLNISKKELGKVLKRYKGTAWDQSPIFKKVYEQEYGQLGGEPYG CLVGDYYFDQSPPDVELLNGIAQVAAAAHAPFIAAAAPKLMGMDNWSELSNPRDLAKIFSTPDYAAWRSLRESEDSKYIG LAMPRTLSRLPYGAATSPVEDFDFEEDTAGADSNKYTWQNAAYAMAVNINRSFKQYGWCSRIRGIESGGAVEGLPTHTFP TDDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNSDMAAFISAQSLNKPDEYDDPDATANAALGARLPYMFACCRFA HYLKCIVRDKIGSFSDREQMQSWLTRWVTQYIDGDPSNSSEETKARKPLAAAEVVVEEVEGAPGYYSSKFFLKPHYQLEG LTVSLRLVSRLPSAAKA >Mature_496_residues SATEAALATRSIETTERGDFAALLNREFRPKSERAKEEVESAVRTLAEQVLNRSDVVGEDVSQTIKAYIAEIDRTLTEQL NQILHHADLQQLEGAWRGLHYLVNNTETDQQLKIRVLNISKKELGKVLKRYKGTAWDQSPIFKKVYEQEYGQLGGEPYGC LVGDYYFDQSPPDVELLNGIAQVAAAAHAPFIAAAAPKLMGMDNWSELSNPRDLAKIFSTPDYAAWRSLRESEDSKYIGL AMPRTLSRLPYGAATSPVEDFDFEEDTAGADSNKYTWQNAAYAMAVNINRSFKQYGWCSRIRGIESGGAVEGLPTHTFPT DDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNSDMAAFISAQSLNKPDEYDDPDATANAALGARLPYMFACCRFAH YLKCIVRDKIGSFSDREQMQSWLTRWVTQYIDGDPSNSSEETKARKPLAAAEVVVEEVEGAPGYYSSKFFLKPHYQLEGL TVSLRLVSRLPSAAKA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55350; Mature: 55218
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATEAALATRSIETTERGDFAALLNREFRPKSERAKEEVESAVRTLAEQVLNRSDVVGE CCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCHH DVSQTIKAYIAEIDRTLTEQLNQILHHADLQQLEGAWRGLHYLVNNTETDQQLKIRVLNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC SKKELGKVLKRYKGTAWDQSPIFKKVYEQEYGQLGGEPYGCLVGDYYFDQSPPDVELLNG CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHCCCCCCCHHHHHH IAQVAAAAHAPFIAAAAPKLMGMDNWSELSNPRDLAKIFSTPDYAAWRSLRESEDSKYIG HHHHHHHHCCCHHHHHCHHHHCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEE LAMPRTLSRLPYGAATSPVEDFDFEEDTAGADSNKYTWQNAAYAMAVNINRSFKQYGWCS EECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHHHH RIRGIESGGAVEGLPTHTFPTDDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNSDM HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCHHHCCCCCCC AAFISAQSLNKPDEYDDPDATANAALGARLPYMFACCRFAHYLKCIVRDKIGSFSDREQM EEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH QSWLTRWVTQYIDGDPSNSSEETKARKPLAAAEVVVEEVEGAPGYYSSKFFLKPHYQLEG HHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEECC LTVSLRLVSRLPSAAKA CEEHHHHHHHCCHHCCC >Mature Secondary Structure SATEAALATRSIETTERGDFAALLNREFRPKSERAKEEVESAVRTLAEQVLNRSDVVGE CCHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCHH DVSQTIKAYIAEIDRTLTEQLNQILHHADLQQLEGAWRGLHYLVNNTETDQQLKIRVLNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC SKKELGKVLKRYKGTAWDQSPIFKKVYEQEYGQLGGEPYGCLVGDYYFDQSPPDVELLNG CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHCCCCCCCHHHHHH IAQVAAAAHAPFIAAAAPKLMGMDNWSELSNPRDLAKIFSTPDYAAWRSLRESEDSKYIG HHHHHHHHCCCHHHHHCHHHHCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEE LAMPRTLSRLPYGAATSPVEDFDFEEDTAGADSNKYTWQNAAYAMAVNINRSFKQYGWCS EECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHHHH RIRGIESGGAVEGLPTHTFPTDDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNSDM HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCHHHCCCCCCC AAFISAQSLNKPDEYDDPDATANAALGARLPYMFACCRFAHYLKCIVRDKIGSFSDREQM EEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH QSWLTRWVTQYIDGDPSNSSEETKARKPLAAAEVVVEEVEGAPGYYSSKFFLKPHYQLEG HHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEECC LTVSLRLVSRLPSAAKA CEEHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA