| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fhuA [H]
Identifier: 21244779
GI number: 21244779
Start: 4758091
End: 4760271
Strand: Reverse
Name: fhuA [H]
Synonym: XAC4062
Alternate gene names: 21244779
Gene position: 4760271-4758091 (Counterclockwise)
Preceding gene: 21244780
Following gene: 21244778
Centisome position: 91.98
GC content: 63.59
Gene sequence:
>2181_bases ATGACGTGCACGCAAGCCACGCTGCTGTCCTTGTCGATTGCCGCCGCATTGGGCTGCATCGGCGCCGCACGCGCGCAGCA GACAGCCACGGTGCAAGCCACCGAGGCGACCACGCTGGACCAGGTCGTCGTGAGCGGCCGCCTGCGTTCGCTGGAGCAAT TCACCCCGACCGGCAGCCGGCTCAATCTGTCCGCGCGCGAGACGCCCGGTACGCTGGATGCGATCAACGCCGCCGCCATC GAAGCACGCGGGCTACGCAGCGTGGAGAAGGCAGCCGAGAGTTTGCCAGGCATCAACACTGGCGGCTCGCCGGGAAATCC GGCGACCTTCTCGATGCGCGGCTTCACCGACGGGCAGATCACCATCCTGCACAACGGCCTGTATCTGGGACCGTCGAACA TGACCAACCGGCCGCAGAATACCTTCAACCTGCAATCGGTCGAAGTGTTGAAAGGCCCGGCGTCGGTGATCTATGGCCAG GGCGCGGTGGGCGGCGCGGTCAATGTGACCAACAAGGCGCCGACCTTCGGCCCTGCGCAATACGAACTGCTGCTGGGCGC GTCCAGCTACGGCGGCCGGGTATTCGGCGTCGGTGCCGGCGGCGGCATCAATGATGATTGGGCGTATCGCGCCGACATCA GCCAGGTGTCGTCTGATGGCTATGTGCACGGCGCCGATTCCAGCGCGATCAACGCCACCGTGTCGCTGCTGTGGCACCCG CGCGAAGACATCAGCGCGCAATTTTCGCTGGATTACGCAAAAGACCAGCCCTCGACCTACTTCGGTACCCCGCTGTTGCC GGCCGCTGCGGCACGCACGCCCATCAACGGCATCCTGCGCGCGCCCAATGGCGAAGTGGTGGATGCCGCCACGCGCCGCA CCAACTACAACGTGGCCGATGCCAGCATCGACTCGCGTCAGCTGTGGCCGCAGGCCTATCTCAAGTGGAAGGTCACCGAT GCCATCACCGTGCAGAACATGGCCTATTACTTCCATGCCGATCGGCGCTGGATCAATGCGGAGAACTACACCTACAACCC GCAGAGCGGGCGCATCGAGCGTGATCGCTTCTTCGTGTATCACGAGCAGGCGCTGTGGGGGAATCAGACCAGCGCGACCT TCGACCAGCGCATCGCAGGGCTGAAGAACCGGCTTGTGGTGGGGCTGGATTACAGTCGCCTGGACTTCGTCAGGAACCGC GGCTTCCCCGATGGCGACAGCGTGGCGGTGGACGCACGCGGACCAAGCGGTGAATTCGGCGAACGCGTGCGCCGACGCAG CCCCACCACCTGGACCAATGCCGCGCTGTTTTTCGAAGATGCGCTGGATGTCACCGACAAGGCAAAACTGGTACTCGGCG GGCGCTACGAATATCTCGATCTGGATCGCAAGAACTTCGGTCCGGATGGTGGGTTTCAGGCGGCATCGAGTTTCTCACGC ACCTACCGCCCGGCCAATGGCCGTCTCGGTCTGGTCTACGCGCTCACCCCGAACATCACCCCGTACGCCTCTTACACCAC CGCCACCGACCCGGTCGGTTCCAATATCTTCATCGTCAATGCGGGGCAGGATTTTGCGTTGAGCAAATCGCGGCAGGCGG AAGTCGGCGTCAAGGCCGCCACGGCCGATCAACGCCTGAGCGGCACGCTGGCGGTCTATGACATCAAACGCAACAACATC CTGGCGCTGACGGCCCAGGACGCGCTCAGCAACATCGGGCGGCAAACCTCGCGCGGGTTCGAACTCAGCGTCGATGCGCA GCTGACCTCGCAGTGGAGCGCAAATGCCAACTACGCCTACGTCGATGCCGAGTACGCGCAATTCATCGACAGCAATAGCG GCCTGGACGCCTCCGGCAACCGCCCCACCAATGTACCCAAGTCGCTGTTCAATGCCTGGACCAGCGTGAGAAACGTCGCC GGCCTGCCGCTGGAGCTGGGCGCCTCGGTGCGCCATGTCGGAACGCGCTACGGCAACCTCGCCAACACGCTGCGTCTGGA GTCGTACACCTTGACCGGTGCGTACGCCACCTACGATATGAATTCCGAGGTGTCGCTATCGCTGCACGCGGACAATCTGT TCAACACGCACTACGTGCAATGGGCGGACGTGTTCTATCCCGGGCAGGTCATCCTGGGCTTGCCACGGACGGTGGAGCTG AGCCTGCATGCACGTTTCTGA
Upstream 100 bases:
>100_bases GGCCGCCATTCGCGCCTACCTCTCGCACCGTTTCGCCGTTGCACGGCAGCGCTGAGGTACGCGCGCTCCGGCCTTCCACC TGCCTTTCTGGAGAACGCAC
Downstream 100 bases:
>100_bases CCGGCTGGCACGGCCCAGGCCGAAGATATTCTGGGTCGCCTGGTTGCATCGCTGGACGGGCGTGGCGTTCTGCCTGATGT TCGCAGTGTGGTTCGCCAGC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 726; Mature: 725
Protein sequence:
>726_residues MTCTQATLLSLSIAAALGCIGAARAQQTATVQATEATTLDQVVVSGRLRSLEQFTPTGSRLNLSARETPGTLDAINAAAI EARGLRSVEKAAESLPGINTGGSPGNPATFSMRGFTDGQITILHNGLYLGPSNMTNRPQNTFNLQSVEVLKGPASVIYGQ GAVGGAVNVTNKAPTFGPAQYELLLGASSYGGRVFGVGAGGGINDDWAYRADISQVSSDGYVHGADSSAINATVSLLWHP REDISAQFSLDYAKDQPSTYFGTPLLPAAAARTPINGILRAPNGEVVDAATRRTNYNVADASIDSRQLWPQAYLKWKVTD AITVQNMAYYFHADRRWINAENYTYNPQSGRIERDRFFVYHEQALWGNQTSATFDQRIAGLKNRLVVGLDYSRLDFVRNR GFPDGDSVAVDARGPSGEFGERVRRRSPTTWTNAALFFEDALDVTDKAKLVLGGRYEYLDLDRKNFGPDGGFQAASSFSR TYRPANGRLGLVYALTPNITPYASYTTATDPVGSNIFIVNAGQDFALSKSRQAEVGVKAATADQRLSGTLAVYDIKRNNI LALTAQDALSNIGRQTSRGFELSVDAQLTSQWSANANYAYVDAEYAQFIDSNSGLDASGNRPTNVPKSLFNAWTSVRNVA GLPLELGASVRHVGTRYGNLANTLRLESYTLTGAYATYDMNSEVSLSLHADNLFNTHYVQWADVFYPGQVILGLPRTVEL SLHARF
Sequences:
>Translated_726_residues MTCTQATLLSLSIAAALGCIGAARAQQTATVQATEATTLDQVVVSGRLRSLEQFTPTGSRLNLSARETPGTLDAINAAAI EARGLRSVEKAAESLPGINTGGSPGNPATFSMRGFTDGQITILHNGLYLGPSNMTNRPQNTFNLQSVEVLKGPASVIYGQ GAVGGAVNVTNKAPTFGPAQYELLLGASSYGGRVFGVGAGGGINDDWAYRADISQVSSDGYVHGADSSAINATVSLLWHP REDISAQFSLDYAKDQPSTYFGTPLLPAAAARTPINGILRAPNGEVVDAATRRTNYNVADASIDSRQLWPQAYLKWKVTD AITVQNMAYYFHADRRWINAENYTYNPQSGRIERDRFFVYHEQALWGNQTSATFDQRIAGLKNRLVVGLDYSRLDFVRNR GFPDGDSVAVDARGPSGEFGERVRRRSPTTWTNAALFFEDALDVTDKAKLVLGGRYEYLDLDRKNFGPDGGFQAASSFSR TYRPANGRLGLVYALTPNITPYASYTTATDPVGSNIFIVNAGQDFALSKSRQAEVGVKAATADQRLSGTLAVYDIKRNNI LALTAQDALSNIGRQTSRGFELSVDAQLTSQWSANANYAYVDAEYAQFIDSNSGLDASGNRPTNVPKSLFNAWTSVRNVA GLPLELGASVRHVGTRYGNLANTLRLESYTLTGAYATYDMNSEVSLSLHADNLFNTHYVQWADVFYPGQVILGLPRTVEL SLHARF >Mature_725_residues TCTQATLLSLSIAAALGCIGAARAQQTATVQATEATTLDQVVVSGRLRSLEQFTPTGSRLNLSARETPGTLDAINAAAIE ARGLRSVEKAAESLPGINTGGSPGNPATFSMRGFTDGQITILHNGLYLGPSNMTNRPQNTFNLQSVEVLKGPASVIYGQG AVGGAVNVTNKAPTFGPAQYELLLGASSYGGRVFGVGAGGGINDDWAYRADISQVSSDGYVHGADSSAINATVSLLWHPR EDISAQFSLDYAKDQPSTYFGTPLLPAAAARTPINGILRAPNGEVVDAATRRTNYNVADASIDSRQLWPQAYLKWKVTDA ITVQNMAYYFHADRRWINAENYTYNPQSGRIERDRFFVYHEQALWGNQTSATFDQRIAGLKNRLVVGLDYSRLDFVRNRG FPDGDSVAVDARGPSGEFGERVRRRSPTTWTNAALFFEDALDVTDKAKLVLGGRYEYLDLDRKNFGPDGGFQAASSFSRT YRPANGRLGLVYALTPNITPYASYTTATDPVGSNIFIVNAGQDFALSKSRQAEVGVKAATADQRLSGTLAVYDIKRNNIL ALTAQDALSNIGRQTSRGFELSVDAQLTSQWSANANYAYVDAEYAQFIDSNSGLDASGNRPTNVPKSLFNAWTSVRNVAG LPLELGASVRHVGTRYGNLANTLRLESYTLTGAYATYDMNSEVSLSLHADNLFNTHYVQWADVFYPGQVILGLPRTVELS LHARF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=720, Percent_Identity=24.7222222222222, Blast_Score=147, Evalue=3e-36, Organism=Escherichia coli, GI1787723, Length=639, Percent_Identity=23.4741784037559, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1787024, Length=257, Percent_Identity=26.0700389105058, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787344, Length=375, Percent_Identity=22.6666666666667, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78456; Mature: 78325
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCTQATLLSLSIAAALGCIGAARAQQTATVQATEATTLDQVVVSGRLRSLEQFTPTGSR CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCE LNLSARETPGTLDAINAAAIEARGLRSVEKAAESLPGINTGGSPGNPATFSMRGFTDGQI EEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEE TILHNGLYLGPSNMTNRPQNTFNLQSVEVLKGPASVIYGQGAVGGAVNVTNKAPTFGPAQ EEEECCEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEEECCCCCCCCCCE YELLLGASSYGGRVFGVGAGGGINDDWAYRADISQVSSDGYVHGADSSAINATVSLLWHP EEEEEECCCCCCEEEEEECCCCCCCCCEEECCHHHHCCCCEEECCCCCCCEEEEEEEECC REDISAQFSLDYAKDQPSTYFGTPLLPAAAARTPINGILRAPNGEVVDAATRRTNYNVAD CCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCEEEEEHHCCCCCEEC ASIDSRQLWPQAYLKWKVTDAITVQNMAYYFHADRRWINAENYTYNPQSGRIERDRFFVY CCCCCHHCCCCCEEEEEEEEEEEEEEEEEEEECCCEEECCCCCEECCCCCCEECCEEEEE HEQALWGNQTSATFDQRIAGLKNRLVVGLDYSRLDFVRNRGFPDGDSVAVDARGPSGEFG EEHHHCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCEEEECCCCCCHHH ERVRRRSPTTWTNAALFFEDALDVTDKAKLVLGGRYEYLDLDRKNFGPDGGFQAASSFSR HHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHH TYRPANGRLGLVYALTPNITPYASYTTATDPVGSNIFIVNAGQDFALSKSRQAEVGVKAA HCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE TADQRLSGTLAVYDIKRNNILALTAQDALSNIGRQTSRGFELSVDAQLTSQWSANANYAY CCCCCCCCEEEEEEECCCCEEEEECHHHHHHCCHHCCCCEEEEEEEEECCCCCCCCCEEE VDAEYAQFIDSNSGLDASGNRPTNVPKSLFNAWTSVRNVAGLPLELGASVRHVGTRYGNL EEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCC ANTLRLESYTLTGAYATYDMNSEVSLSLHADNLFNTHYVQWADVFYPGQVILGLPRTVEL HHEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCEEEEEEEEEECCEEEEECCCEEEE SLHARF EEEECC >Mature Secondary Structure TCTQATLLSLSIAAALGCIGAARAQQTATVQATEATTLDQVVVSGRLRSLEQFTPTGSR CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCE LNLSARETPGTLDAINAAAIEARGLRSVEKAAESLPGINTGGSPGNPATFSMRGFTDGQI EEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEE TILHNGLYLGPSNMTNRPQNTFNLQSVEVLKGPASVIYGQGAVGGAVNVTNKAPTFGPAQ EEEECCEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEEECCCCCCCCCCE YELLLGASSYGGRVFGVGAGGGINDDWAYRADISQVSSDGYVHGADSSAINATVSLLWHP EEEEEECCCCCCEEEEEECCCCCCCCCEEECCHHHHCCCCEEECCCCCCCEEEEEEEECC REDISAQFSLDYAKDQPSTYFGTPLLPAAAARTPINGILRAPNGEVVDAATRRTNYNVAD CCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCEEEEEHHCCCCCEEC ASIDSRQLWPQAYLKWKVTDAITVQNMAYYFHADRRWINAENYTYNPQSGRIERDRFFVY CCCCCHHCCCCCEEEEEEEEEEEEEEEEEEEECCCEEECCCCCEECCCCCCEECCEEEEE HEQALWGNQTSATFDQRIAGLKNRLVVGLDYSRLDFVRNRGFPDGDSVAVDARGPSGEFG EEHHHCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCEEEECCCCCCHHH ERVRRRSPTTWTNAALFFEDALDVTDKAKLVLGGRYEYLDLDRKNFGPDGGFQAASSFSR HHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHH TYRPANGRLGLVYALTPNITPYASYTTATDPVGSNIFIVNAGQDFALSKSRQAEVGVKAA HCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE TADQRLSGTLAVYDIKRNNILALTAQDALSNIGRQTSRGFELSVDAQLTSQWSANANYAY CCCCCCCCEEEEEEECCCCEEEEECHHHHHHCCHHCCCCEEEEEEEEECCCCCCCCCEEE VDAEYAQFIDSNSGLDASGNRPTNVPKSLFNAWTSVRNVAGLPLELGASVRHVGTRYGNL EEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCC ANTLRLESYTLTGAYATYDMNSEVSLSLHADNLFNTHYVQWADVFYPGQVILGLPRTVEL HHEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCEEEEEEEEEECCEEEEECCCEEEE SLHARF EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]