| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244690
Identifier: 21244690
GI number: 21244690
Start: 4666773
End: 4667366
Strand: Direct
Name: 21244690
Synonym: XAC3972
Alternate gene names: NA
Gene position: 4666773-4667366 (Clockwise)
Preceding gene: 21244689
Following gene: 21244691
Centisome position: 90.17
GC content: 64.14
Gene sequence:
>594_bases ATGAAATTCACGCTTATCACCGCTTCGCTATTGGCCATGCTCTCTCTGACTGCCTGCGATCGCCCCGGCGGCGATGCGTC GCGCACTGCGCCAGCGGTGTCGCCCGAGCCGACGGCTGCGCCCGTCAGCGGCAACGGTGCGACCGAGTTGGCCAAGGGCG ATAGCGCAGTGCTGGGCGTGCTGGCAGCGATCGACGACAACGAGATCGCACTCGCCAAGCAGGCCATCGCACAGGATCTG GGCGGTGCCACCGGCGAGTTCGCGCAGCAGATGCTGCACGACCACCAAGCCAACCTTGAAAAGACCAAGTCGCTTGGCGC AACGGAGAGCCCACGCGCACAGGCCATGCGCGCCAAGGGCAAGGCGGCAGTGGAAGCGCTGTCCAAGACGCTGACCTTGC CGGACGGCAAGGATGCGTACCGCAATGCATTCATGCGCAACATGGTCATCGACCATGGCGACACCATCAAGATCATCGAT TCGGAACTGCTGCCCGCCGCCGAAAGCGCGCCGGTCAAACAGCATCTGGAAGAGACGCGCCGCGTGGTTTCGGCGCATTT CGAACGCGCCCACGCGGTGTCGTCGTCCAAGTAG
Upstream 100 bases:
>100_bases CGTTGCCCAGCCGCAATGGGCCTGACCGACCTCCCCGGAGCCGCGTAGCGGCTCCTTTGTATTTCAACGTCGGCAATCGT CGACTCATTCCAGGATCTTC
Downstream 100 bases:
>100_bases GCGGCTGATCAAGCGCTCGCCCTGCAAACGCGCCGGCCAGTCCGGCGCGTTTGCGTTGGGTGGGCAGCACGCGCCGCTGT CGTCCAGGTAGCTGGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKFTLITASLLAMLSLTACDRPGGDASRTAPAVSPEPTAAPVSGNGATELAKGDSAVLGVLAAIDDNEIALAKQAIAQDL GGATGEFAQQMLHDHQANLEKTKSLGATESPRAQAMRAKGKAAVEALSKTLTLPDGKDAYRNAFMRNMVIDHGDTIKIID SELLPAAESAPVKQHLEETRRVVSAHFERAHAVSSSK
Sequences:
>Translated_197_residues MKFTLITASLLAMLSLTACDRPGGDASRTAPAVSPEPTAAPVSGNGATELAKGDSAVLGVLAAIDDNEIALAKQAIAQDL GGATGEFAQQMLHDHQANLEKTKSLGATESPRAQAMRAKGKAAVEALSKTLTLPDGKDAYRNAFMRNMVIDHGDTIKIID SELLPAAESAPVKQHLEETRRVVSAHFERAHAVSSSK >Mature_197_residues MKFTLITASLLAMLSLTACDRPGGDASRTAPAVSPEPTAAPVSGNGATELAKGDSAVLGVLAAIDDNEIALAKQAIAQDL GGATGEFAQQMLHDHQANLEKTKSLGATESPRAQAMRAKGKAAVEALSKTLTLPDGKDAYRNAFMRNMVIDHGDTIKIID SELLPAAESAPVKQHLEETRRVVSAHFERAHAVSSSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20596; Mature: 20596
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTLITASLLAMLSLTACDRPGGDASRTAPAVSPEPTAAPVSGNGATELAKGDSAVLGV CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHH LAAIDDNEIALAKQAIAQDLGGATGEFAQQMLHDHQANLEKTKSLGATESPRAQAMRAKG HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH KAAVEALSKTLTLPDGKDAYRNAFMRNMVIDHGDTIKIIDSELLPAAESAPVKQHLEETR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCHHHHHHHHHH RVVSAHFERAHAVSSSK HHHHHHHHHHHHHCCCC >Mature Secondary Structure MKFTLITASLLAMLSLTACDRPGGDASRTAPAVSPEPTAAPVSGNGATELAKGDSAVLGV CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHH LAAIDDNEIALAKQAIAQDLGGATGEFAQQMLHDHQANLEKTKSLGATESPRAQAMRAKG HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH KAAVEALSKTLTLPDGKDAYRNAFMRNMVIDHGDTIKIIDSELLPAAESAPVKQHLEETR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCHHHHHHHHHH RVVSAHFERAHAVSSSK HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA