Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21244690

Identifier: 21244690

GI number: 21244690

Start: 4666773

End: 4667366

Strand: Direct

Name: 21244690

Synonym: XAC3972

Alternate gene names: NA

Gene position: 4666773-4667366 (Clockwise)

Preceding gene: 21244689

Following gene: 21244691

Centisome position: 90.17

GC content: 64.14

Gene sequence:

>594_bases
ATGAAATTCACGCTTATCACCGCTTCGCTATTGGCCATGCTCTCTCTGACTGCCTGCGATCGCCCCGGCGGCGATGCGTC
GCGCACTGCGCCAGCGGTGTCGCCCGAGCCGACGGCTGCGCCCGTCAGCGGCAACGGTGCGACCGAGTTGGCCAAGGGCG
ATAGCGCAGTGCTGGGCGTGCTGGCAGCGATCGACGACAACGAGATCGCACTCGCCAAGCAGGCCATCGCACAGGATCTG
GGCGGTGCCACCGGCGAGTTCGCGCAGCAGATGCTGCACGACCACCAAGCCAACCTTGAAAAGACCAAGTCGCTTGGCGC
AACGGAGAGCCCACGCGCACAGGCCATGCGCGCCAAGGGCAAGGCGGCAGTGGAAGCGCTGTCCAAGACGCTGACCTTGC
CGGACGGCAAGGATGCGTACCGCAATGCATTCATGCGCAACATGGTCATCGACCATGGCGACACCATCAAGATCATCGAT
TCGGAACTGCTGCCCGCCGCCGAAAGCGCGCCGGTCAAACAGCATCTGGAAGAGACGCGCCGCGTGGTTTCGGCGCATTT
CGAACGCGCCCACGCGGTGTCGTCGTCCAAGTAG

Upstream 100 bases:

>100_bases
CGTTGCCCAGCCGCAATGGGCCTGACCGACCTCCCCGGAGCCGCGTAGCGGCTCCTTTGTATTTCAACGTCGGCAATCGT
CGACTCATTCCAGGATCTTC

Downstream 100 bases:

>100_bases
GCGGCTGATCAAGCGCTCGCCCTGCAAACGCGCCGGCCAGTCCGGCGCGTTTGCGTTGGGTGGGCAGCACGCGCCGCTGT
CGTCCAGGTAGCTGGGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKFTLITASLLAMLSLTACDRPGGDASRTAPAVSPEPTAAPVSGNGATELAKGDSAVLGVLAAIDDNEIALAKQAIAQDL
GGATGEFAQQMLHDHQANLEKTKSLGATESPRAQAMRAKGKAAVEALSKTLTLPDGKDAYRNAFMRNMVIDHGDTIKIID
SELLPAAESAPVKQHLEETRRVVSAHFERAHAVSSSK

Sequences:

>Translated_197_residues
MKFTLITASLLAMLSLTACDRPGGDASRTAPAVSPEPTAAPVSGNGATELAKGDSAVLGVLAAIDDNEIALAKQAIAQDL
GGATGEFAQQMLHDHQANLEKTKSLGATESPRAQAMRAKGKAAVEALSKTLTLPDGKDAYRNAFMRNMVIDHGDTIKIID
SELLPAAESAPVKQHLEETRRVVSAHFERAHAVSSSK
>Mature_197_residues
MKFTLITASLLAMLSLTACDRPGGDASRTAPAVSPEPTAAPVSGNGATELAKGDSAVLGVLAAIDDNEIALAKQAIAQDL
GGATGEFAQQMLHDHQANLEKTKSLGATESPRAQAMRAKGKAAVEALSKTLTLPDGKDAYRNAFMRNMVIDHGDTIKIID
SELLPAAESAPVKQHLEETRRVVSAHFERAHAVSSSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20596; Mature: 20596

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTLITASLLAMLSLTACDRPGGDASRTAPAVSPEPTAAPVSGNGATELAKGDSAVLGV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHH
LAAIDDNEIALAKQAIAQDLGGATGEFAQQMLHDHQANLEKTKSLGATESPRAQAMRAKG
HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KAAVEALSKTLTLPDGKDAYRNAFMRNMVIDHGDTIKIIDSELLPAAESAPVKQHLEETR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCHHHHHHHHHH
RVVSAHFERAHAVSSSK
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFTLITASLLAMLSLTACDRPGGDASRTAPAVSPEPTAAPVSGNGATELAKGDSAVLGV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHH
LAAIDDNEIALAKQAIAQDLGGATGEFAQQMLHDHQANLEKTKSLGATESPRAQAMRAKG
HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KAAVEALSKTLTLPDGKDAYRNAFMRNMVIDHGDTIKIIDSELLPAAESAPVKQHLEETR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCCHHHHHHHHHH
RVVSAHFERAHAVSSSK
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA