Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21244687

Identifier: 21244687

GI number: 21244687

Start: 4665433

End: 4665855

Strand: Direct

Name: 21244687

Synonym: XAC3968

Alternate gene names: NA

Gene position: 4665433-4665855 (Clockwise)

Preceding gene: 21244684

Following gene: 21244688

Centisome position: 90.14

GC content: 58.87

Gene sequence:

>423_bases
ATGACCTCTCCCCTGCGGCGTGATCGCGCGTCGTTGCTGGCCTCGGTCGCAGCTGAGGGACGAGTCGTGGAAGTGGGTGT
CGCCGGAGCCTTACTTCAGTGCCAGATACAGGCCAAGCACAATCAGGAACACCACGATCAAACTGATGGCGATACGCCCG
CCGCGCAACTCCAACAAGGCGTGCCACCACACGCGGGCTTCAGGTGCGCCGCTTGCATGATGCGGCTTACGGCTACTGGT
CTCGCTGTCCTGCATCCTGGGTACTCTCGCTCCATTACGTCGCCGCTTACCTTAATGATCAGACGTTACATAAGTGTGGA
GCGGTTCAGAATCTTCCGTGAAATGCGGCATTGCAAAGGCGATTTTCGCCTGAGCGGCGATCACATACGGGACCCAAGGT
GGTCGGGTGCACTACTGTCGTGA

Upstream 100 bases:

>100_bases
AATTTCGCCACACACCCAAGCATGCGTTGCACGCTCATGACCATGCTCGGGCACGGGGCGCGTGGCATGCCCAAGCACCT
GCCGGTAGTGCGTCTGTGCC

Downstream 100 bases:

>100_bases
CATCGGAACGCGTACGAGACCAACGCGTTGTTTCGACAACGCGGTTACAAACGCGTCACGTGGTGCGCGTTGACCACATG
CACGCGGCTGCATGCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTSPLRRDRASLLASVAAEGRVVEVGVAGALLQCQIQAKHNQEHHDQTDGDTPAAQLQQGVPPHAGFRCAACMMRLTATG
LAVLHPGYSRSITSPLTLMIRRYISVERFRIFREMRHCKGDFRLSGDHIRDPRWSGALLS

Sequences:

>Translated_140_residues
MTSPLRRDRASLLASVAAEGRVVEVGVAGALLQCQIQAKHNQEHHDQTDGDTPAAQLQQGVPPHAGFRCAACMMRLTATG
LAVLHPGYSRSITSPLTLMIRRYISVERFRIFREMRHCKGDFRLSGDHIRDPRWSGALLS
>Mature_139_residues
TSPLRRDRASLLASVAAEGRVVEVGVAGALLQCQIQAKHNQEHHDQTDGDTPAAQLQQGVPPHAGFRCAACMMRLTATGL
AVLHPGYSRSITSPLTLMIRRYISVERFRIFREMRHCKGDFRLSGDHIRDPRWSGALLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15502; Mature: 15371

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPLRRDRASLLASVAAEGRVVEVGVAGALLQCQIQAKHNQEHHDQTDGDTPAAQLQQG
CCCCHHHHHHHHHHHHHCCCCEEEEECCCEEHHEEECCCCCCCCCCCCCCCCCHHHHHHC
VPPHAGFRCAACMMRLTATGLAVLHPGYSRSITSPLTLMIRRYISVERFRIFREMRHCKG
CCCCCCHHHHHHHHHHHHHCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
DFRLSGDHIRDPRWSGALLS
CCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSPLRRDRASLLASVAAEGRVVEVGVAGALLQCQIQAKHNQEHHDQTDGDTPAAQLQQG
CCCHHHHHHHHHHHHHCCCCEEEEECCCEEHHEEECCCCCCCCCCCCCCCCCHHHHHHC
VPPHAGFRCAACMMRLTATGLAVLHPGYSRSITSPLTLMIRRYISVERFRIFREMRHCKG
CCCCCCHHHHHHHHHHHHHCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
DFRLSGDHIRDPRWSGALLS
CCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA