| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244685
Identifier: 21244685
GI number: 21244685
Start: 4663471
End: 4664340
Strand: Reverse
Name: 21244685
Synonym: XAC3967
Alternate gene names: NA
Gene position: 4664340-4663471 (Counterclockwise)
Preceding gene: 21244686
Following gene: 21244679
Centisome position: 90.12
GC content: 62.07
Gene sequence:
>870_bases ATGGAAGCCAAACTTTCCAGTATCGACATTCCGGTCGGCAACGACGCACTCAGTGGCACCTTGCTCACGCCTTCAGGTAT GCCTGCAGTGTTGTTCGTGCACGGCTGGGGCGGCAGCCAACACCACAGCCTGGTACGTGCGCGCGAGGCGGCAGGCCTGG GCTGCATCTGCATGACCTTCGATCTACGTGGGCATGAGGGTTATGCATCGATGCGCCAGACCGTGACACGGGCGCAGAAC CTGGACGACATCAAGGCCGCGTACGATCAATTGGCGAGCCTGCCGTACGTGGATGCGCAGTCGATCGCAGTGGTCGGCCT GAGTTACGGGGGCTATTTGTCCGCATTGCTGACGCGCGAACGCCCGGTGGAATGGCTGGCGTTGCGATCTCCTGCGCTCT ACAAGGACGCGCACTGGGATCAACCCAAGGTCAGCCTGAACGCCGACCCGGACCTGATGGCGTACCGCCAGCAGCGCCTG CATCCGGCCGATAACATCGCCTTGGCCGCCTGCGCCGAGTACAAGGGCGATGTGCTGTTGGTGGAAGCCGAACACGATGT GATCGTGCCGCAGCCGGTGCTGCACAACTATGCGCAAGCGTTCGTGCAGGCGCGTTCGCTCACATCGCGCGTCATCGCTG GCGCGGACCATGCGCTCAGCATCAAGGAACACCAGCAGCAATACACGCGTGCACTGATCGACTGGCTGACCGAAATGGTC GTGGGACGTCGGATCGCATTGGCCAAGGAAGTGGTGGCCACGCGCAAGCAGCTGCTCAAGGATCAGCAAGGTGCTGCTGC GACCTCATTGGAACAGGCCGCTCCGGTCTTTCGTGGCGACATCCGTGCGGTGGAGAAGACCGCAGATTAG
Upstream 100 bases:
>100_bases TCTATGCGGGCGAGCCGCCGACCGATGCGCAGGTCTACTACCGCGCAACCCAACCCGGCCCTGGGCCGCGTTACAAATAC AGGAGGATCTCTGCAACGTA
Downstream 100 bases:
>100_bases TCGTCCGGGACGAGATGGCGCGCGCAAGCTCGATGGGGCGTGCATCCGTCGCCTTCTCGGCCTGGTGATGCCCAGCGCGC GCGGACTATCGTGTTGGTTG
Product: hydrolase
Products: NA
Alternate protein names: PGAP1 Family Protein; Peptidase S9 Family Protein; Hydrolase Or Peptidase; Cinnamoyl Ester Hydrolase; Prolyl Oligopeptidase Family
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MEAKLSSIDIPVGNDALSGTLLTPSGMPAVLFVHGWGGSQHHSLVRAREAAGLGCICMTFDLRGHEGYASMRQTVTRAQN LDDIKAAYDQLASLPYVDAQSIAVVGLSYGGYLSALLTRERPVEWLALRSPALYKDAHWDQPKVSLNADPDLMAYRQQRL HPADNIALAACAEYKGDVLLVEAEHDVIVPQPVLHNYAQAFVQARSLTSRVIAGADHALSIKEHQQQYTRALIDWLTEMV VGRRIALAKEVVATRKQLLKDQQGAAATSLEQAAPVFRGDIRAVEKTAD
Sequences:
>Translated_289_residues MEAKLSSIDIPVGNDALSGTLLTPSGMPAVLFVHGWGGSQHHSLVRAREAAGLGCICMTFDLRGHEGYASMRQTVTRAQN LDDIKAAYDQLASLPYVDAQSIAVVGLSYGGYLSALLTRERPVEWLALRSPALYKDAHWDQPKVSLNADPDLMAYRQQRL HPADNIALAACAEYKGDVLLVEAEHDVIVPQPVLHNYAQAFVQARSLTSRVIAGADHALSIKEHQQQYTRALIDWLTEMV VGRRIALAKEVVATRKQLLKDQQGAAATSLEQAAPVFRGDIRAVEKTAD >Mature_289_residues MEAKLSSIDIPVGNDALSGTLLTPSGMPAVLFVHGWGGSQHHSLVRAREAAGLGCICMTFDLRGHEGYASMRQTVTRAQN LDDIKAAYDQLASLPYVDAQSIAVVGLSYGGYLSALLTRERPVEWLALRSPALYKDAHWDQPKVSLNADPDLMAYRQQRL HPADNIALAACAEYKGDVLLVEAEHDVIVPQPVLHNYAQAFVQARSLTSRVIAGADHALSIKEHQQQYTRALIDWLTEMV VGRRIALAKEVVATRKQLLKDQQGAAATSLEQAAPVFRGDIRAVEKTAD
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31530; Mature: 31530
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00708 PRO_ENDOPEP_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAKLSSIDIPVGNDALSGTLLTPSGMPAVLFVHGWGGSQHHSLVRAREAAGLGCICMTF CCCCCCEECCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEE DLRGHEGYASMRQTVTRAQNLDDIKAAYDQLASLPYVDAQSIAVVGLSYGGYLSALLTRE EECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCC RPVEWLALRSPALYKDAHWDQPKVSLNADPDLMAYRQQRLHPADNIALAACAEYKGDVLL CCCHHEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCEEE VEAEHDVIVPQPVLHNYAQAFVQARSLTSRVIAGADHALSIKEHQQQYTRALIDWLTEMV EECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VGRRIALAKEVVATRKQLLKDQQGAAATSLEQAAPVFRGDIRAVEKTAD HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHCCC >Mature Secondary Structure MEAKLSSIDIPVGNDALSGTLLTPSGMPAVLFVHGWGGSQHHSLVRAREAAGLGCICMTF CCCCCCEECCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEE DLRGHEGYASMRQTVTRAQNLDDIKAAYDQLASLPYVDAQSIAVVGLSYGGYLSALLTRE EECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCC RPVEWLALRSPALYKDAHWDQPKVSLNADPDLMAYRQQRLHPADNIALAACAEYKGDVLL CCCHHEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCEEE VEAEHDVIVPQPVLHNYAQAFVQARSLTSRVIAGADHALSIKEHQQQYTRALIDWLTEMV EECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VGRRIALAKEVVATRKQLLKDQQGAAATSLEQAAPVFRGDIRAVEKTAD HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA