Click here to switch to the map view.

The map label for this gene is 21244651

Identifier: 21244651

GI number: 21244651

Start: 4624144

End: 4625418

Strand: Direct

Name: 21244651

Synonym: XAC3932

Alternate gene names: NA

Gene position: 4624144-4625418 (Clockwise)

Preceding gene: 21244650

Following gene: 21244652

Centisome position: 89.35

GC content: 53.18

Gene sequence:

>1275_bases
ATGGCGTCCTTGGAACTAGTGAAGCTAGCCAGCCTCCTCCCGGCGATCACTGATGAAAAGGTATCTTGGCCGTCCACGGA
TGGGCATTCAGCCACACCGGTACCGCTCCTCTTTTGGAGTGATGGCACGCCTTGGCGCGAGGCGAATTTGTGGATCGCGC
AAAAAGCTGTCGGCACAAAATTTGCGACGTTGAACTCCCTCATGTCGCATCTTCTGGCATTCGCGAAATGGTTAGAACGA
ACGGGTGTGACTTGGTGTCATTTCCCAGCACTCGAAAGCGAGCGATGTCTATATAGGTTTCGTGGGGCACTCAAGACGGC
CCTGGATTACGGCGAAATATCGCCCCACACGGCGTCCAATCGAATGCGTGCGATAGTCCAGTTTTATAGCTGGGTTTCGA
TGGTAGGCCTTTTGTCGCCCGATTGGCCGATGTGGAAGGAGCGAAGTCTTGGTATTCGGCTTCCCGACAAATTTGGCTTT
GAGCGCACACTGATGACGCGCACGACGAATCTAGCGATATCCTCAAAGCGGGCTGTCGGGGAAAAGCTAGAAGATGGGCT
CTACCCGGTTACCAAGAGCACCGAGCGTGAGATCCTGCGATTCGTTAAAAAGAACGGATCGATCGAGCTCTTCCACATCC
TGAGCATCGGGTTCAGAACCGGTATGCGTCTAGGGACAATTGCCGATCTAAAGGTTGCGTCACTTCAACGTGCAACTGCT
GATCCGCTAATGGCAGGATTCTTCCGAGTGCAAGTCGGCCCGCAGGCTCATCCACCGGTCGCCACTAAGAATGGTGTGAA
TGGCGCCATCCGTATTCACGAAGAAGATCGTGACGCTCTATTGAGTTATGCAGCATCCTCGCGTCGTTTGAAGCGACAAG
CGCGCACTGCTTTGAAGGACCGGAATCTCGTTTTCCTCACAGTGGCTGGCCGCCCGTATGCAGGGACCGATCAAAACAAC
TATCGAGCAGTAGAGATGGAGCTTTCTCGGCTCAGAAGGCTTGCCCTCCAACTTGGTAACGGATGCCTGGTCGACTTTCG
CTTTCACAGATCTAGAGCATCGTTCGGATCAAACGTCGCACGCCTTCTTCTCTCGAGGTTGCCCACAGACTCCGCACTAC
AACTTCTACAGGAGCTTATGCTTCACTCTGAAATCGCAACGACATTGATGTACGTGAAGTTCGCGGAGCGCAGCATCGCT
CTTGAAGACGCCTCTGATGCTTTCACGAAAGAATTTCTAAAACTGGCAGATCGGAATGAGCAACACGATCCCTGA

Upstream 100 bases:

>100_bases
TTCCGGCGCGCTTTCAATTGGTCGCCGCCATGAATCCCTGCCCGTGCACACGTAACATGCCGTGCTAAGATCGTCAATGT
AACGACAATAGAGTGGACAT

Downstream 100 bases:

>100_bases
CTTAACTTTTCCATCGCTACCATATGGAACGAATCAAGTCCCCCTAGATCTTCGACATCATCTATACAGAGGAATCTCCG
AGCAGCACTCGGATAAAGCA

Product: integrase/recombinase

Products: NA

Alternate protein names: Integrase/Recombinase; Phage Integrase Family Protein; Integrase; Bacteriophage Integrase/Recombinase

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MASLELVKLASLLPAITDEKVSWPSTDGHSATPVPLLFWSDGTPWREANLWIAQKAVGTKFATLNSLMSHLLAFAKWLER
TGVTWCHFPALESERCLYRFRGALKTALDYGEISPHTASNRMRAIVQFYSWVSMVGLLSPDWPMWKERSLGIRLPDKFGF
ERTLMTRTTNLAISSKRAVGEKLEDGLYPVTKSTEREILRFVKKNGSIELFHILSIGFRTGMRLGTIADLKVASLQRATA
DPLMAGFFRVQVGPQAHPPVATKNGVNGAIRIHEEDRDALLSYAASSRRLKRQARTALKDRNLVFLTVAGRPYAGTDQNN
YRAVEMELSRLRRLALQLGNGCLVDFRFHRSRASFGSNVARLLLSRLPTDSALQLLQELMLHSEIATTLMYVKFAERSIA
LEDASDAFTKEFLKLADRNEQHDP

Sequences:

>Translated_424_residues
MASLELVKLASLLPAITDEKVSWPSTDGHSATPVPLLFWSDGTPWREANLWIAQKAVGTKFATLNSLMSHLLAFAKWLER
TGVTWCHFPALESERCLYRFRGALKTALDYGEISPHTASNRMRAIVQFYSWVSMVGLLSPDWPMWKERSLGIRLPDKFGF
ERTLMTRTTNLAISSKRAVGEKLEDGLYPVTKSTEREILRFVKKNGSIELFHILSIGFRTGMRLGTIADLKVASLQRATA
DPLMAGFFRVQVGPQAHPPVATKNGVNGAIRIHEEDRDALLSYAASSRRLKRQARTALKDRNLVFLTVAGRPYAGTDQNN
YRAVEMELSRLRRLALQLGNGCLVDFRFHRSRASFGSNVARLLLSRLPTDSALQLLQELMLHSEIATTLMYVKFAERSIA
LEDASDAFTKEFLKLADRNEQHDP
>Mature_423_residues
ASLELVKLASLLPAITDEKVSWPSTDGHSATPVPLLFWSDGTPWREANLWIAQKAVGTKFATLNSLMSHLLAFAKWLERT
GVTWCHFPALESERCLYRFRGALKTALDYGEISPHTASNRMRAIVQFYSWVSMVGLLSPDWPMWKERSLGIRLPDKFGFE
RTLMTRTTNLAISSKRAVGEKLEDGLYPVTKSTEREILRFVKKNGSIELFHILSIGFRTGMRLGTIADLKVASLQRATAD
PLMAGFFRVQVGPQAHPPVATKNGVNGAIRIHEEDRDALLSYAASSRRLKRQARTALKDRNLVFLTVAGRPYAGTDQNNY
RAVEMELSRLRRLALQLGNGCLVDFRFHRSRASFGSNVARLLLSRLPTDSALQLLQELMLHSEIATTLMYVKFAERSIAL
EDASDAFTKEFLKLADRNEQHDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47694; Mature: 47562

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLELVKLASLLPAITDEKVSWPSTDGHSATPVPLLFWSDGTPWREANLWIAQKAVGTK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHCHH
FATLNSLMSHLLAFAKWLERTGVTWCHFPALESERCLYRFRGALKTALDYGEISPHTASN
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
RMRAIVQFYSWVSMVGLLSPDWPMWKERSLGIRLPDKFGFERTLMTRTTNLAISSKRAVG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHEECCHHHHH
EKLEDGLYPVTKSTEREILRFVKKNGSIELFHILSIGFRTGMRLGTIADLKVASLQRATA
HHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEHEEHHHHHCCCCCCCCHHHHHHHHHHHHC
DPLMAGFFRVQVGPQAHPPVATKNGVNGAIRIHEEDRDALLSYAASSRRLKRQARTALKD
CHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
RNLVFLTVAGRPYAGTDQNNYRAVEMELSRLRRLALQLGNGCLVDFRFHRSRASFGSNVA
CCEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
RLLLSRLPTDSALQLLQELMLHSEIATTLMYVKFAERSIALEDASDAFTKEFLKLADRNE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCC
QHDP
CCCC
>Mature Secondary Structure 
ASLELVKLASLLPAITDEKVSWPSTDGHSATPVPLLFWSDGTPWREANLWIAQKAVGTK
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHCHH
FATLNSLMSHLLAFAKWLERTGVTWCHFPALESERCLYRFRGALKTALDYGEISPHTASN
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
RMRAIVQFYSWVSMVGLLSPDWPMWKERSLGIRLPDKFGFERTLMTRTTNLAISSKRAVG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHEECCHHHHH
EKLEDGLYPVTKSTEREILRFVKKNGSIELFHILSIGFRTGMRLGTIADLKVASLQRATA
HHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEHEEHHHHHCCCCCCCCHHHHHHHHHHHHC
DPLMAGFFRVQVGPQAHPPVATKNGVNGAIRIHEEDRDALLSYAASSRRLKRQARTALKD
CHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
RNLVFLTVAGRPYAGTDQNNYRAVEMELSRLRRLALQLGNGCLVDFRFHRSRASFGSNVA
CCEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
RLLLSRLPTDSALQLLQELMLHSEIATTLMYVKFAERSIALEDASDAFTKEFLKLADRNE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCC
QHDP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA