Click here to switch to the map view.

The map label for this gene is yliI [C]

Identifier: 21244592

GI number: 21244592

Start: 4550692

End: 4551870

Strand: Direct

Name: yliI [C]

Synonym: XAC3868

Alternate gene names: 21244592

Gene position: 4550692-4551870 (Clockwise)

Preceding gene: 21244590

Following gene: 21244596

Centisome position: 87.93

GC content: 64.63

Gene sequence:

>1179_bases
ATGTCTGTCCGTCGCCTGCTTGCCCTGGCCTGCTCGGCCAGCCTGTTCACTGCCGGCACTGCAGTTGCCGCGCCCGCAGC
CGCCCCCGCGGCCTCCATCCCCAAAGCACAGTGGCCATTTCAGGCCACCACGGTCGCCGATTTCGACGAACCCTGGGCAA
TGACCTTCCTGCCCGATGGCAGCTTGCTGGTCAGCGAAAAGCGCGGTGCCTTGATGCGCCTGGACACTAAGACCAAACGC
AAGAGCGCCGTCACCGGAGTGCCGACGGTTGCCTACGGTGGTCAAGGCGGTTTCGGCGATGTTCTGGCGCATCCGCGCTT
CGCCAAGAACGGGCTGGTCTACCTGAGTTATGCCGAGCCGGGCGAAGGCGACACGCGCGGCGCTGCGGTGGCGCGCGCCA
AGCTCACGCTGGATGCAACCGGCGGCGGCACGCTCTCGGACCTGAAAGTGATCTGGCGCCAGGACCCCAAAGTCACCGGC
AATGGTCATTTCGGGCATCGGCTCGCGTTCGGGCCCGATGGCAAGCTGTGGATCAGCTCCAGCGAACGGCAGAAGTTCAC
TCCTGCCCAGGACATGAAAGCCAACCTCGGCAAACTGATCCGGCTCAACGACGACGGCAGCGTGCCGGCCGACAACCCGT
TCGTTGCGCAAGGCGGCGTTGCTGCGCAGGTGTGGTCGTTGGGCCATCGCAATATTCTTGGCCTGGCCTTCGACAGCAAG
GGCCGCCTGTGGGAACACGAAATGGGGCCGCTCGGCGGTGATGAGTTGAACCTGATCCAGCGTGGCGCCAACTACGGCTA
CCCGATCGTCTCCAACGGCGACAACTATGACGGCACGCCGATCCCCGATCACAACACGCGCCCGGAGTTCGCCGCGCCCA
AGATCAGCTGGACGCCGGTGATTTCGCCGGCAGGTTTTGTGATCTATAGCGGCAAGCAATTCCCGACATGGCGCGGGAAT
GGCTTTATCGGTGGGCTGTCGTCGATGGCGCTGGTGCAGGTGTCGCTGGGTGACCAGCCGCGCGAAGTGGCCCGTTACGA
CATGGGCGCACGCATCCGCGAAGTGGAGCAAGGCCCGGACGGCGCGCTCTGGCTACTGGAAGACGAAGCCAGTGGCAGTA
CCGGGCGTCTGCTGAAACTCACGCCCAAGAGCAAGGCCGCGGTCGAAAACGACGCCTGA

Upstream 100 bases:

>100_bases
AGGGCGACCCTCGCGACGTCGTGTAAGGTACTTGAAAACCCGACGCGGGACACGTTGCGGGAGGGCTGCAGCGTACCGTG
CCCATCCCCAGGAGGACCCC

Downstream 100 bases:

>100_bases
TCGATTCCGCAGCATAAGCCGGTGCATCCGATGCGCTGCACCGGCAAGGGCGATGGCGACATTGGACAGTCGTCATCGCG
TTTGACCACGACGTCAGCGG

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSVRRLLALACSASLFTAGTAVAAPAAAPAASIPKAQWPFQATTVADFDEPWAMTFLPDGSLLVSEKRGALMRLDTKTKR
KSAVTGVPTVAYGGQGGFGDVLAHPRFAKNGLVYLSYAEPGEGDTRGAAVARAKLTLDATGGGTLSDLKVIWRQDPKVTG
NGHFGHRLAFGPDGKLWISSSERQKFTPAQDMKANLGKLIRLNDDGSVPADNPFVAQGGVAAQVWSLGHRNILGLAFDSK
GRLWEHEMGPLGGDELNLIQRGANYGYPIVSNGDNYDGTPIPDHNTRPEFAAPKISWTPVISPAGFVIYSGKQFPTWRGN
GFIGGLSSMALVQVSLGDQPREVARYDMGARIREVEQGPDGALWLLEDEASGSTGRLLKLTPKSKAAVENDA

Sequences:

>Translated_392_residues
MSVRRLLALACSASLFTAGTAVAAPAAAPAASIPKAQWPFQATTVADFDEPWAMTFLPDGSLLVSEKRGALMRLDTKTKR
KSAVTGVPTVAYGGQGGFGDVLAHPRFAKNGLVYLSYAEPGEGDTRGAAVARAKLTLDATGGGTLSDLKVIWRQDPKVTG
NGHFGHRLAFGPDGKLWISSSERQKFTPAQDMKANLGKLIRLNDDGSVPADNPFVAQGGVAAQVWSLGHRNILGLAFDSK
GRLWEHEMGPLGGDELNLIQRGANYGYPIVSNGDNYDGTPIPDHNTRPEFAAPKISWTPVISPAGFVIYSGKQFPTWRGN
GFIGGLSSMALVQVSLGDQPREVARYDMGARIREVEQGPDGALWLLEDEASGSTGRLLKLTPKSKAAVENDA
>Mature_391_residues
SVRRLLALACSASLFTAGTAVAAPAAAPAASIPKAQWPFQATTVADFDEPWAMTFLPDGSLLVSEKRGALMRLDTKTKRK
SAVTGVPTVAYGGQGGFGDVLAHPRFAKNGLVYLSYAEPGEGDTRGAAVARAKLTLDATGGGTLSDLKVIWRQDPKVTGN
GHFGHRLAFGPDGKLWISSSERQKFTPAQDMKANLGKLIRLNDDGSVPADNPFVAQGGVAAQVWSLGHRNILGLAFDSKG
RLWEHEMGPLGGDELNLIQRGANYGYPIVSNGDNYDGTPIPDHNTRPEFAAPKISWTPVISPAGFVIYSGKQFPTWRGNG
FIGGLSSMALVQVSLGDQPREVARYDMGARIREVEQGPDGALWLLEDEASGSTGRLLKLTPKSKAAVENDA

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936955, Length=273, Percent_Identity=27.1062271062271, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI187936953, Length=273, Percent_Identity=27.1062271062271, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI124248546, Length=320, Percent_Identity=25.3125, Blast_Score=76, Evalue=7e-14,
Organism=Escherichia coli, GI1787060, Length=371, Percent_Identity=38.0053908355795, Blast_Score=230, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 41655; Mature: 41524

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRRLLALACSASLFTAGTAVAAPAAAPAASIPKAQWPFQATTVADFDEPWAMTFLPDG
CCHHHHHHHHHCCHHHHCCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCC
SLLVSEKRGALMRLDTKTKRKSAVTGVPTVAYGGQGGFGDVLAHPRFAKNGLVYLSYAEP
CEEEECCCCCEEEECCCHHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCCCEEEEEECCC
GEGDTRGAAVARAKLTLDATGGGTLSDLKVIWRQDPKVTGNGHFGHRLAFGPDGKLWISS
CCCCCCCEEEEEEEEEEECCCCCCHHHHHEEECCCCCCCCCCCCCCEEEECCCCCEEEEC
SERQKFTPAQDMKANLGKLIRLNDDGSVPADNPFVAQGGVAAQVWSLGHRNILGLAFDSK
CCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHCCCCEEEEEEECCC
GRLWEHEMGPLGGDELNLIQRGANYGYPIVSNGDNYDGTPIPDHNTRPEFAAPKISWTPV
CCEEHHHCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEECCEE
ISPAGFVIYSGKQFPTWRGNGFIGGLSSMALVQVSLGDQPREVARYDMGARIREVEQGPD
ECCCCEEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHCCCC
GALWLLEDEASGSTGRLLKLTPKSKAAVENDA
CEEEEEECCCCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SVRRLLALACSASLFTAGTAVAAPAAAPAASIPKAQWPFQATTVADFDEPWAMTFLPDG
CHHHHHHHHHCCHHHHCCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCC
SLLVSEKRGALMRLDTKTKRKSAVTGVPTVAYGGQGGFGDVLAHPRFAKNGLVYLSYAEP
CEEEECCCCCEEEECCCHHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCCCEEEEEECCC
GEGDTRGAAVARAKLTLDATGGGTLSDLKVIWRQDPKVTGNGHFGHRLAFGPDGKLWISS
CCCCCCCEEEEEEEEEEECCCCCCHHHHHEEECCCCCCCCCCCCCCEEEECCCCCEEEEC
SERQKFTPAQDMKANLGKLIRLNDDGSVPADNPFVAQGGVAAQVWSLGHRNILGLAFDSK
CCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHCCCCEEEEEEECCC
GRLWEHEMGPLGGDELNLIQRGANYGYPIVSNGDNYDGTPIPDHNTRPEFAAPKISWTPV
CCEEHHHCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEECCEE
ISPAGFVIYSGKQFPTWRGNGFIGGLSSMALVQVSLGDQPREVARYDMGARIREVEQGPD
ECCCCEEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHCCCC
GALWLLEDEASGSTGRLLKLTPKSKAAVENDA
CEEEEEECCCCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]