| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244581
Identifier: 21244581
GI number: 21244581
Start: 4540878
End: 4541255
Strand: Reverse
Name: 21244581
Synonym: XAC3857
Alternate gene names: NA
Gene position: 4541255-4540878 (Counterclockwise)
Preceding gene: 21244582
Following gene: 21244580
Centisome position: 87.74
GC content: 65.08
Gene sequence:
>378_bases ATGAATTTGCCCCTGCATTTCGGCCTGCTCGGTTCACTGGAGGCCGGGCTGATTGCGCTCATCCTGGGCGTAGTGGTCTT TGCGGCGGTGGAGCGGGGCGGGCGGCGGTTGCAGTTCAACCATGGGCACACGCTGGGCATTGCGTGTCTGCTGGCCGTGG CCATCGGTGCCGGATACGACATCTGGCATCTCGTTTACACCAGCATCGTGCGACTGGAATCGCCGCTGTATGCGCGCCTG GCGCTGGCCAGGATCCACGACCCCAACGAACTGGGCTCGCGCGTGGTGCTGGAAGTGGCCGGCGCGCTCGCGGGCGTGGT GCTGGGTTGGAAACTGTTCAGTTCCGGGGGCTGGGAAAACGACCCGCCAAGTGCCTGA
Upstream 100 bases:
>100_bases ATGGCAGCCTCCAGTTCGTTCAGGGCGCCTGCATCGTGAGGCGCGCGGATCCAGGCGCTGCAGCCGCTAGACTGGTGCGC CTGCTGCCTGGATCGTCACA
Downstream 100 bases:
>100_bases GCGTGCGGCATAAAGTGCGGGGCAGGTCGCACATTTTCATGCATTGAATGAGGTGCTTCGGTTTGACTCACTCGTGCCTA ACAGGCGGTTAGCCGCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MNLPLHFGLLGSLEAGLIALILGVVVFAAVERGGRRLQFNHGHTLGIACLLAVAIGAGYDIWHLVYTSIVRLESPLYARL ALARIHDPNELGSRVVLEVAGALAGVVLGWKLFSSGGWENDPPSA
Sequences:
>Translated_125_residues MNLPLHFGLLGSLEAGLIALILGVVVFAAVERGGRRLQFNHGHTLGIACLLAVAIGAGYDIWHLVYTSIVRLESPLYARL ALARIHDPNELGSRVVLEVAGALAGVVLGWKLFSSGGWENDPPSA >Mature_125_residues MNLPLHFGLLGSLEAGLIALILGVVVFAAVERGGRRLQFNHGHTLGIACLLAVAIGAGYDIWHLVYTSIVRLESPLYARL ALARIHDPNELGSRVVLEVAGALAGVVLGWKLFSSGGWENDPPSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13249; Mature: 13249
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPLHFGLLGSLEAGLIALILGVVVFAAVERGGRRLQFNHGHTLGIACLLAVAIGAGYD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCH IWHLVYTSIVRLESPLYARLALARIHDPNELGSRVVLEVAGALAGVVLGWKLFSSGGWEN HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DPPSA CCCCC >Mature Secondary Structure MNLPLHFGLLGSLEAGLIALILGVVVFAAVERGGRRLQFNHGHTLGIACLLAVAIGAGYD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCH IWHLVYTSIVRLESPLYARLALARIHDPNELGSRVVLEVAGALAGVVLGWKLFSSGGWEN HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DPPSA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA