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The map label for this gene is mtrC [H]

Identifier: 21244572

GI number: 21244572

Start: 4527423

End: 4528667

Strand: Direct

Name: mtrC [H]

Synonym: XAC3848

Alternate gene names: 21244572

Gene position: 4527423-4528667 (Clockwise)

Preceding gene: 21244567

Following gene: 21244573

Centisome position: 87.48

GC content: 66.27

Gene sequence:

>1245_bases
ATGTCGCGTTTTTGGAAGGTCACACTGCTGGTTGTCGCGGTGCTCGTCGTGGTGTTCGTCGCAGTGCGGATGATGGGTGG
GGGCAATCACGGCAAGCGCGCAGGCGCGCCGGACGGCAATGACCCGGACAACAGCGGCCCGGTACCGGTGACGGTGGTGG
CGGCCACCACGCAGGACGTTCCGGTCTATGCCAGCGCGCTAGGCACGGTCACCGCGCTCAATACGGTCACGGTCAGCCCG
CAGGTGGGCGGCCAGCTGATGAGCCTGAATTTCAAGGAAGGCCAGGAAGTGAAGAAGGGCGATCTGCTGGCGCAGATCGA
TCCGCGCACGCTGCAGGCCAGCTACGACCAGGCACTGGCGGCCAAACGCCAGAACCAGGCGCTGTTGGCGACCTCGCGGG
TGAATTACCAGCGTTCCAACGACCCGGCCTACAAGCAGTATGTCTCGCGCACGGATCTGGATACCCAACGCAACCAGGTG
GCCCAGTACGAGGCCGCGGTTGCGGCCAACGATGCGCAGATGCGCTCGGCGCAGGTGCAATTGCAGTTCACCCGCGTCAC
TGCGCCGATCGACGGCATCGCCGGCATCCGTGGCGTGGACGTGGGCAACATCGTCACCAGCAGCTCCACGATCGTCACCC
TGACCCAGATCCGCCCGATCTACGTGTCTTTCAACCTGCCCGAGCGTGAGTTGCAGGCAGTGCGTACCGGTCAGACGGCG
GCGCCACTGGCCGTGGCGGCACTGGATCGCGGCGATGCGCATGTGATCAGCAGCGACGGCAAGCTGGATGTGATCGACAA
CCGCATCTCCGCCGACAGCGGCACCTTCGGCGCACGCGCGATCTTCAACAACACCGACAACGCGCTATGGCCGGGCCAGT
TCGTCAATGTGCGCCTGCAGCTGCGCACCATCGCCGGCGGTACCGTGGTGCCGTCCCAGTCGGTGCAGCGCGGCCCTGAC
GGCGATTACGTGTACGTGGTGGGCAGCGACAACACCGCACAGATGCGCACCGTGGTGCAGGGCGTGGAAGTGGACGACAG
CCATGTGCAGATCACCAAGGGCCTCAAGCCCGGCGAGCGGGTGGTGACCGAAGGCCAGTTCCGCCTGAAACCGGGCAGCA
AGGTCAGCGCGCTCAAGCCGGGCGAGACGCCGCCGGAACCGACCGAGGCCGAACTCAAGGCCGCGAAGGACAAACAGAGC
CGTGGTGGTGGCCCCGGCGGCCGTCGTGGCGGCGGTCCGCGCTAA

Upstream 100 bases:

>100_bases
TTACTTCAGTAACGCTCAATCGGGAGAGCGCAACGATATGCTTGCACAGCCGCCCCCACGGTCGCATCCACGCGCCCGGC
CCGCCCTCAGGAGTTGTCGC

Downstream 100 bases:

>100_bases
TTCTCGACCATCGGCGACGGAACCTCCGTCGCCGATGTGCGCCGGCGCTGCATGCGCCGGCTTCGCCTGACGTCTTCAGC
AAGGACACCCCCCGTGGGCT

Product: membrane fusion protein

Products: NA

Alternate protein names: Multidrug transporter mdtA [H]

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSRFWKVTLLVVAVLVVVFVAVRMMGGGNHGKRAGAPDGNDPDNSGPVPVTVVAATTQDVPVYASALGTVTALNTVTVSP
QVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQV
AQYEAAVAANDAQMRSAQVQLQFTRVTAPIDGIAGIRGVDVGNIVTSSSTIVTLTQIRPIYVSFNLPERELQAVRTGQTA
APLAVAALDRGDAHVISSDGKLDVIDNRISADSGTFGARAIFNNTDNALWPGQFVNVRLQLRTIAGGTVVPSQSVQRGPD
GDYVYVVGSDNTAQMRTVVQGVEVDDSHVQITKGLKPGERVVTEGQFRLKPGSKVSALKPGETPPEPTEAELKAAKDKQS
RGGGPGGRRGGGPR

Sequences:

>Translated_414_residues
MSRFWKVTLLVVAVLVVVFVAVRMMGGGNHGKRAGAPDGNDPDNSGPVPVTVVAATTQDVPVYASALGTVTALNTVTVSP
QVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQV
AQYEAAVAANDAQMRSAQVQLQFTRVTAPIDGIAGIRGVDVGNIVTSSSTIVTLTQIRPIYVSFNLPERELQAVRTGQTA
APLAVAALDRGDAHVISSDGKLDVIDNRISADSGTFGARAIFNNTDNALWPGQFVNVRLQLRTIAGGTVVPSQSVQRGPD
GDYVYVVGSDNTAQMRTVVQGVEVDDSHVQITKGLKPGERVVTEGQFRLKPGSKVSALKPGETPPEPTEAELKAAKDKQS
RGGGPGGRRGGGPR
>Mature_413_residues
SRFWKVTLLVVAVLVVVFVAVRMMGGGNHGKRAGAPDGNDPDNSGPVPVTVVAATTQDVPVYASALGTVTALNTVTVSPQ
VGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVA
QYEAAVAANDAQMRSAQVQLQFTRVTAPIDGIAGIRGVDVGNIVTSSSTIVTLTQIRPIYVSFNLPERELQAVRTGQTAA
PLAVAALDRGDAHVISSDGKLDVIDNRISADSGTFGARAIFNNTDNALWPGQFVNVRLQLRTIAGGTVVPSQSVQRGPDG
DYVYVVGSDNTAQMRTVVQGVEVDDSHVQITKGLKPGERVVTEGQFRLKPGSKVSALKPGETPPEPTEAELKAAKDKQSR
GGGPGGRRGGGPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=362, Percent_Identity=41.4364640883978, Blast_Score=252, Evalue=3e-68,
Organism=Escherichia coli, GI1786668, Length=337, Percent_Identity=32.6409495548961, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1789929, Length=351, Percent_Identity=29.9145299145299, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI1789665, Length=356, Percent_Identity=32.0224719101124, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI87081796, Length=318, Percent_Identity=27.9874213836478, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87081951, Length=168, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022824
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 43894; Mature: 43763

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFWKVTLLVVAVLVVVFVAVRMMGGGNHGKRAGAPDGNDPDNSGPVPVTVVAATTQDV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
PVYASALGTVTALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALA
CHHHHHHHHEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHH
AKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQ
HHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCEEEEE
LQFTRVTAPIDGIAGIRGVDVGNIVTSSSTIVTLTQIRPIYVSFNLPERELQAVRTGQTA
EEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEEEEEEEEEEECCCHHHHHHHHCCCCC
APLAVAALDRGDAHVISSDGKLDVIDNRISADSGTFGARAIFNNTDNALWPGQFVNVRLQ
CCEEEEEECCCCEEEEECCCCEEEECCEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEE
LRTIAGGTVVPSQSVQRGPDGDYVYVVGSDNTAQMRTVVQGVEVDDSHVQITKGLKPGER
EEEECCCEECCCHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCC
VVTEGQFRLKPGSKVSALKPGETPPEPTEAELKAAKDKQSRGGGPGGRRGGGPR
EEECCEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRFWKVTLLVVAVLVVVFVAVRMMGGGNHGKRAGAPDGNDPDNSGPVPVTVVAATTQDV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
PVYASALGTVTALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALA
CHHHHHHHHEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHH
AKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQ
HHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCEEEEE
LQFTRVTAPIDGIAGIRGVDVGNIVTSSSTIVTLTQIRPIYVSFNLPERELQAVRTGQTA
EEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEEEEEEEEEEECCCHHHHHHHHCCCCC
APLAVAALDRGDAHVISSDGKLDVIDNRISADSGTFGARAIFNNTDNALWPGQFVNVRLQ
CCEEEEEECCCCEEEEECCCCEEEECCEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEE
LRTIAGGTVVPSQSVQRGPDGDYVYVVGSDNTAQMRTVVQGVEVDDSHVQITKGLKPGER
EEEECCCEECCCHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCC
VVTEGQFRLKPGSKVSALKPGETPPEPTEAELKAAKDKQSRGGGPGGRRGGGPR
EEECCEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA