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The map label for this gene is smf [H]

Identifier: 21244527

GI number: 21244527

Start: 4473861

End: 4475006

Strand: Direct

Name: smf [H]

Synonym: XAC3803

Alternate gene names: 21244527

Gene position: 4473861-4475006 (Clockwise)

Preceding gene: 21244526

Following gene: 21244528

Centisome position: 86.44

GC content: 69.72

Gene sequence:

>1146_bases
ATGGCCCAAACCGCTCCCGACCTACGCGCACTACTGATCCTGCTGCTGGCTGGCGGCCGCAGCCCACCGCGACGAAAATT
GTTGACTTCGTACGGGTCAGCGTCCGAGATGCTGGCCGCCGGGCCTGGGGCGTGGCGTGCCGCTGGTTGCGATGAGGTGC
AAGCCGCGCTGCTGCAGAGCCCCGATCCACATGCGCTGGAGGCCGCGCTGCGCTGGTGCGAACAGCCCGGCCATCACCTG
ATCGGCTGGCGCGATCCGGATTACCCGGCGCTGCTGCGGCATATCGCCAACCCGCCGATGGCCTTGTTCGTGGACGGCGA
CCCCGATGCCCTCTGGCACCCGGGCGTGGCGGTGGTCGGCAGCCGCGCGGCCACTGCCGGCGGCCGCGACCACACCCGCG
CATTCGCCTCGAGCCTGGCCTGCGCCGGGTTAAGCATCGTCAGCGGCATGGCCGCCGGCGTGGATGCGATCGCACACGAG
GGCGCACTGGCCCAGCACGACGGCATCACGGTGGCGGTGGTCGGCACAGGTGTCGATGTCGCCTATCCCGAGCGGCACCA
AGGCTTGCGCGATCGCATCGCCGAACGCGGCGCGGTGGTCAGCGAATATCTGCCGGGCACTGCCCCGGTCGCGGCGCACT
TTCCGGCCCGCAACCGGATCATTGCCGGGCTGGCGCTGGGGACGCTGGTGGTCGAAGCGGCGATGCGTTCGGGTGCACTG
ATTACCGCCCGGCTGGCGGCCGAAGCAGGCCGCGAGGTGTTCGCCCTACCCGGCTCGCTGCACAATCCGCTCGCGCGCGG
CTGCCATCACCTCATCCGGCAGGGCGCCACGCTGGCGCAGGAGCCCGCACAGGTCATCGAGGGACTGGGCCAGCTGTCTG
GCGAATTGGCCACCGCCTTGCGCGAGCGCCTGGCCGCCCCCACTGAGTTGCCCGGGAAGGCTACGACCAGCGCTGGCCCC
GGTCCTGCCCGCTCTGATCCCGACTACCAGCGCTTGTGGCAAGCGCTGGACCACGACCCAACCCCTATGGATTCATTGGT
GCAGCGCACCGGATTGACGGCCGCCGCGCTGTCCTCCATGCTGCTCATCATGGAACTGGAGGGAGACGTGGTCACCGAGC
ACGGTCGCTATACCCGCAATCCTTAG

Upstream 100 bases:

>100_bases
ATTTCGTCAAGCATCCTGACGCGCAATAAGCGAAAGATCCGATGCATCAACGCGACGGCGCCCGAGGGCGCCGTCGTCGT
TCGTGGCCTAGCCTGGGTGT

Downstream 100 bases:

>100_bases
TTTCTTCACCTCCACAGCGTCGCGCGACGCAGGCCGAGGGCAATGAAAGAGAGCATTCTCGATGTACTGCTGTACCTGTT
TGAACATTACTTTAGCGAAG

Product: DNA processing chain A

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MAQTAPDLRALLILLLAGGRSPPRRKLLTSYGSASEMLAAGPGAWRAAGCDEVQAALLQSPDPHALEAALRWCEQPGHHL
IGWRDPDYPALLRHIANPPMALFVDGDPDALWHPGVAVVGSRAATAGGRDHTRAFASSLACAGLSIVSGMAAGVDAIAHE
GALAQHDGITVAVVGTGVDVAYPERHQGLRDRIAERGAVVSEYLPGTAPVAAHFPARNRIIAGLALGTLVVEAAMRSGAL
ITARLAAEAGREVFALPGSLHNPLARGCHHLIRQGATLAQEPAQVIEGLGQLSGELATALRERLAAPTELPGKATTSAGP
GPARSDPDYQRLWQALDHDPTPMDSLVQRTGLTAAALSSMLLIMELEGDVVTEHGRYTRNP

Sequences:

>Translated_381_residues
MAQTAPDLRALLILLLAGGRSPPRRKLLTSYGSASEMLAAGPGAWRAAGCDEVQAALLQSPDPHALEAALRWCEQPGHHL
IGWRDPDYPALLRHIANPPMALFVDGDPDALWHPGVAVVGSRAATAGGRDHTRAFASSLACAGLSIVSGMAAGVDAIAHE
GALAQHDGITVAVVGTGVDVAYPERHQGLRDRIAERGAVVSEYLPGTAPVAAHFPARNRIIAGLALGTLVVEAAMRSGAL
ITARLAAEAGREVFALPGSLHNPLARGCHHLIRQGATLAQEPAQVIEGLGQLSGELATALRERLAAPTELPGKATTSAGP
GPARSDPDYQRLWQALDHDPTPMDSLVQRTGLTAAALSSMLLIMELEGDVVTEHGRYTRNP
>Mature_380_residues
AQTAPDLRALLILLLAGGRSPPRRKLLTSYGSASEMLAAGPGAWRAAGCDEVQAALLQSPDPHALEAALRWCEQPGHHLI
GWRDPDYPALLRHIANPPMALFVDGDPDALWHPGVAVVGSRAATAGGRDHTRAFASSLACAGLSIVSGMAAGVDAIAHEG
ALAQHDGITVAVVGTGVDVAYPERHQGLRDRIAERGAVVSEYLPGTAPVAAHFPARNRIIAGLALGTLVVEAAMRSGALI
TARLAAEAGREVFALPGSLHNPLARGCHHLIRQGATLAQEPAQVIEGLGQLSGELATALRERLAAPTELPGKATTSAGPG
PARSDPDYQRLWQALDHDPTPMDSLVQRTGLTAAALSSMLLIMELEGDVVTEHGRYTRNP

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=327, Percent_Identity=40.6727828746177, Blast_Score=204, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39766; Mature: 39635

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTAPDLRALLILLLAGGRSPPRRKLLTSYGSASEMLAAGPGAWRAAGCDEVQAALLQS
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHCC
PDPHALEAALRWCEQPGHHLIGWRDPDYPALLRHIANPPMALFVDGDPDALWHPGVAVVG
CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHC
SRAATAGGRDHTRAFASSLACAGLSIVSGMAAGVDAIAHEGALAQHDGITVAVVGTGVDV
CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEECCCCC
AYPERHQGLRDRIAERGAVVSEYLPGTAPVAAHFPARNRIIAGLALGTLVVEAAMRSGAL
CCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCE
ITARLAAEAGREVFALPGSLHNPLARGCHHLIRQGATLAQEPAQVIEGLGQLSGELATAL
EEEHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RERLAAPTELPGKATTSAGPGPARSDPDYQRLWQALDHDPTPMDSLVQRTGLTAAALSSM
HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHH
LLIMELEGDVVTEHGRYTRNP
HEEEECCCCEECCCCCCCCCC
>Mature Secondary Structure 
AQTAPDLRALLILLLAGGRSPPRRKLLTSYGSASEMLAAGPGAWRAAGCDEVQAALLQS
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHCC
PDPHALEAALRWCEQPGHHLIGWRDPDYPALLRHIANPPMALFVDGDPDALWHPGVAVVG
CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHC
SRAATAGGRDHTRAFASSLACAGLSIVSGMAAGVDAIAHEGALAQHDGITVAVVGTGVDV
CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEECCCCC
AYPERHQGLRDRIAERGAVVSEYLPGTAPVAAHFPARNRIIAGLALGTLVVEAAMRSGAL
CCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCE
ITARLAAEAGREVFALPGSLHNPLARGCHHLIRQGATLAQEPAQVIEGLGQLSGELATAL
EEEHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RERLAAPTELPGKATTSAGPGPARSDPDYQRLWQALDHDPTPMDSLVQRTGLTAAALSSM
HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHH
LLIMELEGDVVTEHGRYTRNP
HEEEECCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]