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The map label for this gene is rfbD [H]

Identifier: 21244467

GI number: 21244467

Start: 4417199

End: 4418392

Strand: Direct

Name: rfbD [H]

Synonym: XAC3742

Alternate gene names: 21244467

Gene position: 4417199-4418392 (Clockwise)

Preceding gene: 21244466

Following gene: 21244468

Centisome position: 85.35

GC content: 63.15

Gene sequence:

>1194_bases
TTGGACCCAATGACCCCGCCGGCCGCGGCGCCGCTTGCCGCCCGTCGCACGCGCGGCAACGCGCGGCGCGGTTTCGATTA
CCTCATCGTCGGCGCCGGGTTTGCCGGCAGCGTGTTGGCCGAACGGTTGGCCGCCGGCCTCGGCAAGCGTGTGCTGGTGG
TCGACCGTCGCCCGCATATCGGCGGCAATGCCTACGATTTCCATGACGATGCCGGCGTGCTGATCCATCGTTATGGTCCG
CACATCTTCCATACCAATGCGCAGCGCATCGTGGATTACCTCTCCAGCTTCACCCAGTGGCGTCCGTATGCGCACCGCGT
GCTTGCGCAAGTTGGCGAGCAGCAGGTGCCGATCCCGATCAACATGACCACGTTGAACCGGCTGTACGGCCTGCAACTGG
CCACCGAAGAACAGGCCGCAGCGTTCCTGGCCGGCCGCGCCGAGCCGGTGGCGGACATCCAGACCAGCGAAGATGTGGTG
ATCAATCAGGTGGGCCGCGAGCTCTACCAAACCTTCTTCCGCGGTTATACGCGCAAGCAGTGGGGGCTGGATCCCTCGCA
GCTGGACAAGTCGGTGACCTCGCGCGTGCCGACCCGCACCAACGACGACGACCGCTACTTCACCGACACCTTCCAGCAGA
TGCCGCTGCACGGCTATACGCGCATGTTCGAGCGCATGCTCGATCACCCCAACATCAAGGTGATGCTCAATACCGAGTAC
CGCGAGATCTGCGACGAGCTGGAGTACGACCAGCTGGTATACAGCGGGCCGGTGGACGAATATTTCGACTACTGCTACGG
CAAGCTGCCGTACCGCTCGCTCAGGTTCGAACACAGCACGCTGGACCAGGAGCACTTCCAGGCGGTGGCCACGGTCAATT
ATCCGGACGAAGCGGTGGCCTACACGCGTATTACCGAATACAAGCACCTCACCGGCCAGCAACATCCGAGTACCAGCATC
ACCCGCGAGTATCCTTCGGCCGAGGGCGACCCGTATTATCCGATTCCACGCGCGGAGAATGCCGAGCTGTATCGGCGTTA
CGAACGCCTGGCGGCCGAGACGCCCAAGGTCACCTTCCTTGGCCGGCTGGGCACCTACAAGTACTACAACATGGATCAGG
TGGTCGGCCAGGCACTGGCCTTGTACAAGCGCATCGAAGACGCCGAACAGCGTCGCGCCGAGCTGGCGGTCTGA

Upstream 100 bases:

>100_bases
AGGACAGTGCCGATCGCGCACAGTTGCTCGACCGCGCCGATGGCGTGCTGGGCGATATGTCCTGGGACCACACCTACGAT
TTGATGAAGGAGACGCTTTC

Downstream 100 bases:

>100_bases
CAACGCACGCCCCGCCCTGCAGCGCCGTCGCTGCAGGGCAGTTATCGACGCATCGCTGCAACCCAGCGGCGCGCGCAGCA
GGATGTTGGATGCATACCCC

Product: UDP-galactopyranose mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MDPMTPPAAAPLAARRTRGNARRGFDYLIVGAGFAGSVLAERLAAGLGKRVLVVDRRPHIGGNAYDFHDDAGVLIHRYGP
HIFHTNAQRIVDYLSSFTQWRPYAHRVLAQVGEQQVPIPINMTTLNRLYGLQLATEEQAAAFLAGRAEPVADIQTSEDVV
INQVGRELYQTFFRGYTRKQWGLDPSQLDKSVTSRVPTRTNDDDRYFTDTFQQMPLHGYTRMFERMLDHPNIKVMLNTEY
REICDELEYDQLVYSGPVDEYFDYCYGKLPYRSLRFEHSTLDQEHFQAVATVNYPDEAVAYTRITEYKHLTGQQHPSTSI
TREYPSAEGDPYYPIPRAENAELYRRYERLAAETPKVTFLGRLGTYKYYNMDQVVGQALALYKRIEDAEQRRAELAV

Sequences:

>Translated_397_residues
MDPMTPPAAAPLAARRTRGNARRGFDYLIVGAGFAGSVLAERLAAGLGKRVLVVDRRPHIGGNAYDFHDDAGVLIHRYGP
HIFHTNAQRIVDYLSSFTQWRPYAHRVLAQVGEQQVPIPINMTTLNRLYGLQLATEEQAAAFLAGRAEPVADIQTSEDVV
INQVGRELYQTFFRGYTRKQWGLDPSQLDKSVTSRVPTRTNDDDRYFTDTFQQMPLHGYTRMFERMLDHPNIKVMLNTEY
REICDELEYDQLVYSGPVDEYFDYCYGKLPYRSLRFEHSTLDQEHFQAVATVNYPDEAVAYTRITEYKHLTGQQHPSTSI
TREYPSAEGDPYYPIPRAENAELYRRYERLAAETPKVTFLGRLGTYKYYNMDQVVGQALALYKRIEDAEQRRAELAV
>Mature_397_residues
MDPMTPPAAAPLAARRTRGNARRGFDYLIVGAGFAGSVLAERLAAGLGKRVLVVDRRPHIGGNAYDFHDDAGVLIHRYGP
HIFHTNAQRIVDYLSSFTQWRPYAHRVLAQVGEQQVPIPINMTTLNRLYGLQLATEEQAAAFLAGRAEPVADIQTSEDVV
INQVGRELYQTFFRGYTRKQWGLDPSQLDKSVTSRVPTRTNDDDRYFTDTFQQMPLHGYTRMFERMLDHPNIKVMLNTEY
REICDELEYDQLVYSGPVDEYFDYCYGKLPYRSLRFEHSTLDQEHFQAVATVNYPDEAVAYTRITEYKHLTGQQHPSTSI
TREYPSAEGDPYYPIPRAENAELYRRYERLAAETPKVTFLGRLGTYKYYNMDQVVGQALALYKRIEDAEQRRAELAV

Specific function: Involved in the conversion of UDP-GalP into UDP-GalF through a 2-keto intermediate [H]

COG id: COG0562

COG function: function code M; UDP-galactopyranose mutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788348, Length=368, Percent_Identity=38.5869565217391, Blast_Score=272, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR016040
- InterPro:   IPR004379
- InterPro:   IPR015899 [H]

Pfam domain/function: PF01266 DAO; PF03275 GLF [H]

EC number: =5.4.99.9 [H]

Molecular weight: Translated: 45592; Mature: 45592

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPMTPPAAAPLAARRTRGNARRGFDYLIVGAGFAGSVLAERLAAGLGKRVLVVDRRPHI
CCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCC
GGNAYDFHDDAGVLIHRYGPHIFHTNAQRIVDYLSSFTQWRPYAHRVLAQVGEQQVPIPI
CCCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEE
NMTTLNRLYGLQLATEEQAAAFLAGRAEPVADIQTSEDVVINQVGRELYQTFFRGYTRKQ
EHHHHHHHHCCEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
WGLDPSQLDKSVTSRVPTRTNDDDRYFTDTFQQMPLHGYTRMFERMLDHPNIKVMLNTEY
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCHH
REICDELEYDQLVYSGPVDEYFDYCYGKLPYRSLRFEHSTLDQEHFQAVATVNYPDEAVA
HHHHHHCCHHHEEECCCHHHHHHHHHCCCCHHHHCCCHHHCCHHHHHEEEEECCCCHHHH
YTRITEYKHLTGQQHPSTSITREYPSAEGDPYYPIPRAENAELYRRYERLAAETPKVTFL
HHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
GRLGTYKYYNMDQVVGQALALYKRIEDAEQRRAELAV
ECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDPMTPPAAAPLAARRTRGNARRGFDYLIVGAGFAGSVLAERLAAGLGKRVLVVDRRPHI
CCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCC
GGNAYDFHDDAGVLIHRYGPHIFHTNAQRIVDYLSSFTQWRPYAHRVLAQVGEQQVPIPI
CCCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEE
NMTTLNRLYGLQLATEEQAAAFLAGRAEPVADIQTSEDVVINQVGRELYQTFFRGYTRKQ
EHHHHHHHHCCEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
WGLDPSQLDKSVTSRVPTRTNDDDRYFTDTFQQMPLHGYTRMFERMLDHPNIKVMLNTEY
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCHH
REICDELEYDQLVYSGPVDEYFDYCYGKLPYRSLRFEHSTLDQEHFQAVATVNYPDEAVA
HHHHHHCCHHHEEECCCHHHHHHHHHCCCCHHHHCCCHHHCCHHHHHEEEEECCCCHHHH
YTRITEYKHLTGQQHPSTSITREYPSAEGDPYYPIPRAENAELYRRYERLAAETPKVTFL
HHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
GRLGTYKYYNMDQVVGQALALYKRIEDAEQRRAELAV
ECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559323 [H]