| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244463
Identifier: 21244463
GI number: 21244463
Start: 4412653
End: 4413432
Strand: Reverse
Name: 21244463
Synonym: XAC3739
Alternate gene names: NA
Gene position: 4413432-4412653 (Counterclockwise)
Preceding gene: 21244470
Following gene: 21244462
Centisome position: 85.27
GC content: 60.77
Gene sequence:
>780_bases GTGTTGCCGATCGCGCCCTGTGCGCGGCAGGCAGTACACCGGCAATGCGGTGGCATGCAGAACAGCGCGGCTGCACGCAA ACTTCATGCGGTTTTGCCGAGGACGCTCGATACTGCGCGCATCGCCAGGAGGTCATCCATGTTCTTGCGTCGTAATGGGC TGTCGTTGTGTCTGCTTGCGTTGACTATCTTCTTCATCGGTTGCCAGGTCTATGCCGGATTGCACGCGTACAACGATGAG TTGCGCGAGCAGGGGCAGCCGACGCTGCTGCTGTCTGCGTATCTGCACAGCCCGCATTTCATGTCTGCATTGTTCGAAAA CTGGGAGAGCGAATTCCTGCAGATGGGGATGTACGTGCTGCTCACCGTGAAGTTGCGTCAGGTGGGCTCTGCCGAATCGC GCCCGCTCGATCCCACGGAAGAAACCGTTGAGATCAAATCTGGACCCACGCCCTGGCCGGTACGTGCCGGCGGGGTATGG AGACGGCTGTACGACCACTCCCTGGCAATCGCGTTCGCGGCGCTATTCCTGATGAGCTTTGCGCTGCACCTGGTCGGCAG TTGGCGGCTGGAGGTGACGGAACGTGCGCAGAAGGGCTTGCCACCGATCACGGTGCTGGAGCATTTCACCAGCGCATCGT TCTGGTTCGAATCGATGCAGAACTGGCAGAGCGAGTTCCTGGCGGTGTTCTCGCTGGTGGTCCTGACCATCTGGTTGCGG CAGAAGGATTCGCCGCAGTCCAAGCCGGTCGAGGCGCCGCATTCGCAGACTGGCGGGTGA
Upstream 100 bases:
>100_bases GGTACGGGCATCGTGGTCTCCTGGCAGTGACTTTGTTGGTTGCACGCCAGTGTGGTGACGCAAACGTAAATATCCGGGCT AAACGATGTGCGCATGGCGT
Downstream 100 bases:
>100_bases AGCGGCTTGAGCCGTTTGCGAGGTGGCGAGGCGTGCGAAGCCGGGCCTGCGCGCTCCACTGTGAGAGTGAGTCGCCAGCT ACGCACTTCACGCAACCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MLPIAPCARQAVHRQCGGMQNSAAARKLHAVLPRTLDTARIARRSSMFLRRNGLSLCLLALTIFFIGCQVYAGLHAYNDE LREQGQPTLLLSAYLHSPHFMSALFENWESEFLQMGMYVLLTVKLRQVGSAESRPLDPTEETVEIKSGPTPWPVRAGGVW RRLYDHSLAIAFAALFLMSFALHLVGSWRLEVTERAQKGLPPITVLEHFTSASFWFESMQNWQSEFLAVFSLVVLTIWLR QKDSPQSKPVEAPHSQTGG
Sequences:
>Translated_259_residues MLPIAPCARQAVHRQCGGMQNSAAARKLHAVLPRTLDTARIARRSSMFLRRNGLSLCLLALTIFFIGCQVYAGLHAYNDE LREQGQPTLLLSAYLHSPHFMSALFENWESEFLQMGMYVLLTVKLRQVGSAESRPLDPTEETVEIKSGPTPWPVRAGGVW RRLYDHSLAIAFAALFLMSFALHLVGSWRLEVTERAQKGLPPITVLEHFTSASFWFESMQNWQSEFLAVFSLVVLTIWLR QKDSPQSKPVEAPHSQTGG >Mature_259_residues MLPIAPCARQAVHRQCGGMQNSAAARKLHAVLPRTLDTARIARRSSMFLRRNGLSLCLLALTIFFIGCQVYAGLHAYNDE LREQGQPTLLLSAYLHSPHFMSALFENWESEFLQMGMYVLLTVKLRQVGSAESRPLDPTEETVEIKSGPTPWPVRAGGVW RRLYDHSLAIAFAALFLMSFALHLVGSWRLEVTERAQKGLPPITVLEHFTSASFWFESMQNWQSEFLAVFSLVVLTIWLR QKDSPQSKPVEAPHSQTGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29123; Mature: 29123
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPIAPCARQAVHRQCGGMQNSAAARKLHAVLPRTLDTARIARRSSMFLRRNGLSLCLLA CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LTIFFIGCQVYAGLHAYNDELREQGQPTLLLSAYLHSPHFMSALFENWESEFLQMGMYVL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LTVKLRQVGSAESRPLDPTEETVEIKSGPTPWPVRAGGVWRRLYDHSLAIAFAALFLMSF HHHHHHHHCCCCCCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALHLVGSWRLEVTERAQKGLPPITVLEHFTSASFWFESMQNWQSEFLAVFSLVVLTIWLR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKDSPQSKPVEAPHSQTGG CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLPIAPCARQAVHRQCGGMQNSAAARKLHAVLPRTLDTARIARRSSMFLRRNGLSLCLLA CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LTIFFIGCQVYAGLHAYNDELREQGQPTLLLSAYLHSPHFMSALFENWESEFLQMGMYVL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LTVKLRQVGSAESRPLDPTEETVEIKSGPTPWPVRAGGVWRRLYDHSLAIAFAALFLMSF HHHHHHHHCCCCCCCCCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALHLVGSWRLEVTERAQKGLPPITVLEHFTSASFWFESMQNWQSEFLAVFSLVVLTIWLR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKDSPQSKPVEAPHSQTGG CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA