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The map label for this gene is cioB [H]

Identifier: 21244461

GI number: 21244461

Start: 4411167

End: 4412189

Strand: Direct

Name: cioB [H]

Synonym: XAC3736

Alternate gene names: 21244461

Gene position: 4411167-4412189 (Clockwise)

Preceding gene: 21244460

Following gene: 21244464

Centisome position: 85.23

GC content: 63.34

Gene sequence:

>1023_bases
ATGGAACTGAGTTACTGGTTGCCGGTGGTGTGGTTTGGCGTGATCGGTTTCGGCGTGCTGATGTACGTGGTGCTGGACGG
CTTCGTGCTCGGGCTGGGCATGCTGGCGCCGTTCGCGCGCGACGAACAGGAAGTGGACCTGATGATGAACACCGCCGCGC
CCATCTGGGACGGCAACGAAACCTGGCTGGTGCTTGGCGGCGCCGGTCTGTTCGCTGCGTTTCCCACGGCGTATGCGGTG
ATCCTGTCCGGCCTGTACCTACCGGTGCTGTTGATGGTGATGGCGCTGGTGTTTCGTGGGGTGGCGTTCGAATTCCGTTT
CAAGGCACAGCGCTCGCGGCGGCTGTGGACCTTGTCGTTCATTGCCGGCTCGATCCTGACCGCGTTCGCGCAAGGCATCA
TCCTCGGCGCGCTGGTGGAAGGCATGCCGCTTACCAATGGGCGCTATACCGGCGGCGTGTTCGGCTGGTTCAGCCCGTTC
ACCATCCTCACCGGTGCTGCGCTGGTATTCGGTTATGCACTGCTTGGCAGCACCTGGTTGATCCTCAAGACCGATGGGCG
CACCCACACCTTGGCGCGGCAGCTGACCAAGCCGCTGGTGGGCGTGGTGGTGACCTTCGTCGTGCTGGTCAGCGCGTGGC
TGCCGTTCCTGAGCTCGCATGTGATGGCGCGTTGGTTCGAGCACGGCAATTTCTGGTGGCTGTCGCCGATTCCGCTGATG
ACCGCAGGCGTAGCGCTTGCGCTATGGCGCAGCAGCGACAGCTCGCGCAGCGACGCATGGCCCTTCCTGTTGACCCTGGC
GATCTTCGTGTTGGGCTTCATTGGCCTGGTGTTGGGCATGTGGCCGTATCTGGTGCCGCCGAGTTACACTATCTGGCAGG
CGGCCTCGCCGCCCTCTTCGCAGATCTTCCCGATGGTGGGCCTGGTGGTACTGCTGCCGCTGGTGCTCGGCTATACGGTG
TGGTCGTACCGTGTGTTCCGCGGCAAGATCGCCGCCGATGTGGGCTATCACCATCACCACTAG

Upstream 100 bases:

>100_bases
CGCAACCCAGCCGCGACGGGCCGGATGTGGCCGGTGGCGACCACACGCCGGCACGCCCGCTGTCTGCAGCACAGACGTCA
CTGGAACAGGAGAACACGCC

Downstream 100 bases:

>100_bases
GCGATAGTGCGGCGCGCATGCGATATGCCGTGCGTTGAGACACATGCATCCAGGCAAACGAACAGCGCCCGCGTGGCGGG
CGCTCCAGCGATGCTAGCGG

Product: cyanide insensitive terminal oxidase

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit II; Cytochrome d ubiquinol oxidase subunit II [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MELSYWLPVVWFGVIGFGVLMYVVLDGFVLGLGMLAPFARDEQEVDLMMNTAAPIWDGNETWLVLGGAGLFAAFPTAYAV
ILSGLYLPVLLMVMALVFRGVAFEFRFKAQRSRRLWTLSFIAGSILTAFAQGIILGALVEGMPLTNGRYTGGVFGWFSPF
TILTGAALVFGYALLGSTWLILKTDGRTHTLARQLTKPLVGVVVTFVVLVSAWLPFLSSHVMARWFEHGNFWWLSPIPLM
TAGVALALWRSSDSSRSDAWPFLLTLAIFVLGFIGLVLGMWPYLVPPSYTIWQAASPPSSQIFPMVGLVVLLPLVLGYTV
WSYRVFRGKIAADVGYHHHH

Sequences:

>Translated_340_residues
MELSYWLPVVWFGVIGFGVLMYVVLDGFVLGLGMLAPFARDEQEVDLMMNTAAPIWDGNETWLVLGGAGLFAAFPTAYAV
ILSGLYLPVLLMVMALVFRGVAFEFRFKAQRSRRLWTLSFIAGSILTAFAQGIILGALVEGMPLTNGRYTGGVFGWFSPF
TILTGAALVFGYALLGSTWLILKTDGRTHTLARQLTKPLVGVVVTFVVLVSAWLPFLSSHVMARWFEHGNFWWLSPIPLM
TAGVALALWRSSDSSRSDAWPFLLTLAIFVLGFIGLVLGMWPYLVPPSYTIWQAASPPSSQIFPMVGLVVLLPLVLGYTV
WSYRVFRGKIAADVGYHHHH
>Mature_340_residues
MELSYWLPVVWFGVIGFGVLMYVVLDGFVLGLGMLAPFARDEQEVDLMMNTAAPIWDGNETWLVLGGAGLFAAFPTAYAV
ILSGLYLPVLLMVMALVFRGVAFEFRFKAQRSRRLWTLSFIAGSILTAFAQGIILGALVEGMPLTNGRYTGGVFGWFSPF
TILTGAALVFGYALLGSTWLILKTDGRTHTLARQLTKPLVGVVVTFVVLVSAWLPFLSSHVMARWFEHGNFWWLSPIPLM
TAGVALALWRSSDSSRSDAWPFLLTLAIFVLGFIGLVLGMWPYLVPPSYTIWQAASPPSSQIFPMVGLVVLLPLVLGYTV
WSYRVFRGKIAADVGYHHHH

Specific function: Cytochrome d terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at low aeration [H]

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli AppB [H]

Homologues:

Organism=Escherichia coli, GI1786954, Length=377, Percent_Identity=29.4429708222812, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1787213, Length=378, Percent_Identity=27.5132275132275, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 37531; Mature: 37531

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSYWLPVVWFGVIGFGVLMYVVLDGFVLGLGMLAPFARDEQEVDLMMNTAAPIWDGNE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC
TWLVLGGAGLFAAFPTAYAVILSGLYLPVLLMVMALVFRGVAFEFRFKAQRSRRLWTLSF
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
IAGSILTAFAQGIILGALVEGMPLTNGRYTGGVFGWFSPFTILTGAALVFGYALLGSTWL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
ILKTDGRTHTLARQLTKPLVGVVVTFVVLVSAWLPFLSSHVMARWFEHGNFWWLSPIPLM
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHH
TAGVALALWRSSDSSRSDAWPFLLTLAIFVLGFIGLVLGMWPYLVPPSYTIWQAASPPSS
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
QIFPMVGLVVLLPLVLGYTVWSYRVFRGKIAADVGYHHHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MELSYWLPVVWFGVIGFGVLMYVVLDGFVLGLGMLAPFARDEQEVDLMMNTAAPIWDGNE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC
TWLVLGGAGLFAAFPTAYAVILSGLYLPVLLMVMALVFRGVAFEFRFKAQRSRRLWTLSF
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
IAGSILTAFAQGIILGALVEGMPLTNGRYTGGVFGWFSPFTILTGAALVFGYALLGSTWL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
ILKTDGRTHTLARQLTKPLVGVVVTFVVLVSAWLPFLSSHVMARWFEHGNFWWLSPIPLM
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHH
TAGVALALWRSSDSSRSDAWPFLLTLAIFVLGFIGLVLGMWPYLVPPSYTIWQAASPPSS
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
QIFPMVGLVVLLPLVLGYTVWSYRVFRGKIAADVGYHHHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]