| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244451
Identifier: 21244451
GI number: 21244451
Start: 4400599
End: 4401498
Strand: Direct
Name: 21244451
Synonym: XAC3726
Alternate gene names: NA
Gene position: 4400599-4401498 (Clockwise)
Preceding gene: 21244450
Following gene: 21244452
Centisome position: 85.03
GC content: 62.56
Gene sequence:
>900_bases ATGTTCATGCACAACAAGCGTTTGATGTACACCGTCCGCGTCGCCCAGCCCAATCCGGATCTGGCGACGTTGATGCTGGA ACAGTTCGGCGGACCGCAGGGCGAACTTGCCGCTGCAATGCGCTACTTCACCCAGGCACTGGGCGAGGACGACCCGGGCC GCAAGGATCTGCTGTTCGACATCGCCACCGAAGAGATCAGCCATCTCGAAATCATCGGCTCGATCATCGCCATGCTCAAC AAGGGGCCCAAAGCAGTGCTCTCCGAGGGCATGGAAGAAGCCATGGAGATGCGCAACATGACCCAGAACAGCACCAGCCA TACCCAGCAGATTCTGTATGGCGGTGGCCCGGCCTTGGTCAATTCCAGCGGCGTGCCGTGGACGGCGGCGTATGTCGACA GCATCGGCTGCCCCACGGCCGACATGCGCTCCAATATCGCGGCCGAAGCGCGTGCCAAGCTGGTGTATGAGCGCCTGATC AACGTCACCGACGATCCGGGCATCGTGGATGCGCTGCGTTTTTTGATGACGCGCGAAGTGGCGCACCAGAAGTCGTTCGA AAAAGCCTTGTACTCGATCGAGCCGAATTTCCCGCCGGGCAAGTTGCCGGGCGACCCGCGCTTCACCGACAAGTACTACA ACACCTCGCAGGGCGAGGGCGACATGATCGGCCCGTGGAATGCCGGCGAACAGTGGGAGGTGATTGCAGACCGCGAAGCG CAGGCCGCCGTCGATGGTGGCGACGGCTCTGCCACGGTTGCGCTGGATGCCACGCAGACCGCGGCACTGGATGCCATGTC CGAACGCCTGCTCTCCAATCCCGAACTGGACCGCGTCACTGGTGCAGACCTGGGTGCAGGCCCGGGCGCCGGTTCCACCA CCGGCGATATCCAGCGTTAA
Upstream 100 bases:
>100_bases GCATATCCCTGCGGGCATCCCCCCGAAAGCCAAAGCCCCACGTTTCTGCCCGCTCCCTGAGTGGTCGTAGTTGCCGGGCA CCAGCCATGGAGCACCACCC
Downstream 100 bases:
>100_bases ACCCGATGGGTGCAGTTGCACCCGTCACCAGCCCGGGGCCATCACGCTCCGGGCTTTTTCATTGCACTGCACAGGAGTTG GCATGAACGAGAAATCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MFMHNKRLMYTVRVAQPNPDLATLMLEQFGGPQGELAAAMRYFTQALGEDDPGRKDLLFDIATEEISHLEIIGSIIAMLN KGPKAVLSEGMEEAMEMRNMTQNSTSHTQQILYGGGPALVNSSGVPWTAAYVDSIGCPTADMRSNIAAEARAKLVYERLI NVTDDPGIVDALRFLMTREVAHQKSFEKALYSIEPNFPPGKLPGDPRFTDKYYNTSQGEGDMIGPWNAGEQWEVIADREA QAAVDGGDGSATVALDATQTAALDAMSERLLSNPELDRVTGADLGAGPGAGSTTGDIQR
Sequences:
>Translated_299_residues MFMHNKRLMYTVRVAQPNPDLATLMLEQFGGPQGELAAAMRYFTQALGEDDPGRKDLLFDIATEEISHLEIIGSIIAMLN KGPKAVLSEGMEEAMEMRNMTQNSTSHTQQILYGGGPALVNSSGVPWTAAYVDSIGCPTADMRSNIAAEARAKLVYERLI NVTDDPGIVDALRFLMTREVAHQKSFEKALYSIEPNFPPGKLPGDPRFTDKYYNTSQGEGDMIGPWNAGEQWEVIADREA QAAVDGGDGSATVALDATQTAALDAMSERLLSNPELDRVTGADLGAGPGAGSTTGDIQR >Mature_299_residues MFMHNKRLMYTVRVAQPNPDLATLMLEQFGGPQGELAAAMRYFTQALGEDDPGRKDLLFDIATEEISHLEIIGSIIAMLN KGPKAVLSEGMEEAMEMRNMTQNSTSHTQQILYGGGPALVNSSGVPWTAAYVDSIGCPTADMRSNIAAEARAKLVYERLI NVTDDPGIVDALRFLMTREVAHQKSFEKALYSIEPNFPPGKLPGDPRFTDKYYNTSQGEGDMIGPWNAGEQWEVIADREA QAAVDGGDGSATVALDATQTAALDAMSERLLSNPELDRVTGADLGAGPGAGSTTGDIQR
Specific function: Unknown
COG id: COG3546
COG function: function code P; Mn-containing catalase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the manganese catalase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007760 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05067 Mn_catalase [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 32230; Mature: 32230
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMHNKRLMYTVRVAQPNPDLATLMLEQFGGPQGELAAAMRYFTQALGEDDPGRKDLLFD CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHEEH IATEEISHLEIIGSIIAMLNKGPKAVLSEGMEEAMEMRNMTQNSTSHTQQILYGGGPALV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEE NSSGVPWTAAYVDSIGCPTADMRSNIAAEARAKLVYERLINVTDDPGIVDALRFLMTREV CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AHQKSFEKALYSIEPNFPPGKLPGDPRFTDKYYNTSQGEGDMIGPWNAGEQWEVIADREA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC QAAVDGGDGSATVALDATQTAALDAMSERLLSNPELDRVTGADLGAGPGAGSTTGDIQR HHEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFMHNKRLMYTVRVAQPNPDLATLMLEQFGGPQGELAAAMRYFTQALGEDDPGRKDLLFD CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHEEH IATEEISHLEIIGSIIAMLNKGPKAVLSEGMEEAMEMRNMTQNSTSHTQQILYGGGPALV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEE NSSGVPWTAAYVDSIGCPTADMRSNIAAEARAKLVYERLINVTDDPGIVDALRFLMTREV CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AHQKSFEKALYSIEPNFPPGKLPGDPRFTDKYYNTSQGEGDMIGPWNAGEQWEVIADREA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC QAAVDGGDGSATVALDATQTAALDAMSERLLSNPELDRVTGADLGAGPGAGSTTGDIQR HHEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]