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The map label for this gene is ybeC [H]

Identifier: 21244442

GI number: 21244442

Start: 4392905

End: 4394500

Strand: Reverse

Name: ybeC [H]

Synonym: XAC3717

Alternate gene names: 21244442

Gene position: 4394500-4392905 (Counterclockwise)

Preceding gene: 21244443

Following gene: 21244439

Centisome position: 84.91

GC content: 66.17

Gene sequence:

>1596_bases
ATGTCCGAACACTCGCTACGCCGCGACGTTGGCCCCTTCGCCCTCATGCTTACCGGCCTGGGCTCGATCATTGGCTCTGG
TTGGTTGTTCGGCGCCTGGCGCGCGGCCGGCCTGGCCGGCCCTGGTGCGATCTGGGCCTGGGTGCTGGGCGCGGCGATCA
TCACCACCATCGCGCTGTCGTATGCCGAGCTCGGCGCCATGTTCCCCGAGTCCGGCGGAATGGTGCGCTACAGCCACTAT
TCGCACGGCTCGCTGGTGGGCTTCATCGCCGGCTGGGCCAACTGGATCGCCATCGTCTCGGTGATCCCGGTCGAGGCCGA
GGCCTCGGTGCAATACATGGCGTCCTGGCCATGGGCCTGGGCGCAGGGCTTGTATGTGCAGGCGCCTGGCGGGGCAGGCG
AGCTCTCGGTGCCCGGCCTGCTGATTTCGGCGGTGCTGGTGCTGGTGTATTTCTTTTTGAATTTCTGGAGCGTCAAGCTG
TTCGCACGCTCCAATACGCTGATCACCATGTTCAAGCTGGTGGTGCCTGCTGCCACCGGCGTGGCGCTGATCGCCAGCGG
CTTCCACAGCGAAAACTTCAGCGTCGGCATCCACGGCGATGCGCACGTGCTCGACCTGGCCGCGGTGCTCACTGCGGTGG
CCACCGCCGGCATCGTCTTCAGCTTCAATGGCTTCCAGAGCCCGGTGAATCTGGCCGGCGAAGCGCGCAACCCCGGCCGC
AGCATTCCGTTCGCAGTCTTGGGCTCGATCGCGCTGGCCACGGTGGTCTACGTGATCCTGCAGGTGGCCTACATCGGCGC
CGTGCCGCCGGATCTATTGGCCAAGGCCGGCTGGCACGGCATCGATTTCCGCTCGCCGTTCGCCGAGCTGGCCATCATCG
TCAACCTGCACTGGCTGGCGATGCTGCTCTACATCGATGCGTTTGTCAGCCCCAGCGGCACCGGCATCACCTATACCGCG
ACCACTGCACGCATGGTCTATGGCATGGAAAAGAACGGCACCATGCCGGCCGCGCTGGGCAAGCTGCATCCGGTCTGGGG
CGTGCCGCGCATGGCGATGTTCTTCAACCTGGCCGTGTCGTTCGTGTTCCTGTTCTTCTTCCGCGGCTGGGGCACGCTGG
CGGCAGTGATCTCGGTGGCCACCATCATTTCCTACCTCACCGGCCCGATCAGCGCGATGGCGCTGCGCCGACACGCGCCG
GAACTGCACCGCCCGCTGCGTATCGCCGCCCTGCCGGTGCTGGCCGGCGTGGCCTTCGTGATGGCCACCGAACTGTTGTA
CTGGGCACGCTGGCCGCTGACCGGCGAGATCATCCTGCTGATGGTCGTGGCGCTGCCGGTGTACTGCTATTACCAGGCCA
AGCAAGGCTGGCCGGACCTGCGCCGCAACCTCAAGGGCGCGGCCTGGATGATCTGCTACCTGCCCACCATCGCGCTGGTC
TCGTGGGCCGGCAGCACCGATTTCGGTGGCCATGGCTACCTCAGCTACGGCACCGACCTGGCCGTGGTCGCTGCAGTGGG
CGCGGTGTTCTATATCTGGGGCGTGCGTAGCGGCTGGCGTACCCCGTCGGTGGAAAAGGCGGTTGCGCAGGCGTGA

Upstream 100 bases:

>100_bases
AACTCCGGCAAGCCTGAATACGCACTGACGGCAAGCGGTCGCTTCTGCGATCATTACCGGCTTGTTGCCGGTTCACGGCG
TCCTCACTGCCAGGCTTCTC

Downstream 100 bases:

>100_bases
GTCGGGCTGCGCAGTTGCTCTGAAGCGCAATGTCGAATCCGCGCAAGATCGTCCTGCATTCACTGCACGGCGAGCGGCCA
GGGCTGGCAGCTCTGGTTGC

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MSEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWVLGAAIITTIALSYAELGAMFPESGGMVRYSHY
SHGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAWAQGLYVQAPGGAGELSVPGLLISAVLVLVYFFLNFWSVKL
FARSNTLITMFKLVVPAATGVALIASGFHSENFSVGIHGDAHVLDLAAVLTAVATAGIVFSFNGFQSPVNLAGEARNPGR
SIPFAVLGSIALATVVYVILQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLAMLLYIDAFVSPSGTGITYTA
TTARMVYGMEKNGTMPAALGKLHPVWGVPRMAMFFNLAVSFVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAP
ELHRPLRIAALPVLAGVAFVMATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPTIALV
SWAGSTDFGGHGYLSYGTDLAVVAAVGAVFYIWGVRSGWRTPSVEKAVAQA

Sequences:

>Translated_531_residues
MSEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWVLGAAIITTIALSYAELGAMFPESGGMVRYSHY
SHGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAWAQGLYVQAPGGAGELSVPGLLISAVLVLVYFFLNFWSVKL
FARSNTLITMFKLVVPAATGVALIASGFHSENFSVGIHGDAHVLDLAAVLTAVATAGIVFSFNGFQSPVNLAGEARNPGR
SIPFAVLGSIALATVVYVILQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLAMLLYIDAFVSPSGTGITYTA
TTARMVYGMEKNGTMPAALGKLHPVWGVPRMAMFFNLAVSFVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAP
ELHRPLRIAALPVLAGVAFVMATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPTIALV
SWAGSTDFGGHGYLSYGTDLAVVAAVGAVFYIWGVRSGWRTPSVEKAVAQA
>Mature_530_residues
SEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWVLGAAIITTIALSYAELGAMFPESGGMVRYSHYS
HGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAWAQGLYVQAPGGAGELSVPGLLISAVLVLVYFFLNFWSVKLF
ARSNTLITMFKLVVPAATGVALIASGFHSENFSVGIHGDAHVLDLAAVLTAVATAGIVFSFNGFQSPVNLAGEARNPGRS
IPFAVLGSIALATVVYVILQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLAMLLYIDAFVSPSGTGITYTAT
TARMVYGMEKNGTMPAALGKLHPVWGVPRMAMFFNLAVSFVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAPE
LHRPLRIAALPVLAGVAFVMATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPTIALVS
WAGSTDFGGHGYLSYGTDLAVVAAVGAVFYIWGVRSGWRTPSVEKAVAQA

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

Organism=Homo sapiens, GI71979932, Length=474, Percent_Identity=24.4725738396624, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI33286428, Length=490, Percent_Identity=24.4897959183673, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI187423910, Length=420, Percent_Identity=23.3333333333333, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI7657591, Length=420, Percent_Identity=23.3333333333333, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87082250, Length=478, Percent_Identity=24.2677824267782, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1790653, Length=354, Percent_Identity=24.2937853107345, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1786789, Length=421, Percent_Identity=24.7030878859857, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1786302, Length=440, Percent_Identity=26.8181818181818, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87081869, Length=338, Percent_Identity=23.3727810650888, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788480, Length=364, Percent_Identity=26.9230769230769, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI32566699, Length=392, Percent_Identity=25.2551020408163, Blast_Score=82, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17532491, Length=408, Percent_Identity=24.5098039215686, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17540018, Length=441, Percent_Identity=25.3968253968254, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17531343, Length=413, Percent_Identity=24.9394673123487, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17533459, Length=417, Percent_Identity=22.7817745803357, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24667468, Length=419, Percent_Identity=26.491646778043, Blast_Score=102, Evalue=8e-22,
Organism=Drosophila melanogaster, GI221331183, Length=427, Percent_Identity=23.8875878220141, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI17647653, Length=427, Percent_Identity=23.8875878220141, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24664379, Length=427, Percent_Identity=23.8875878220141, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21357367, Length=416, Percent_Identity=24.7596153846154, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24651635, Length=453, Percent_Identity=25.60706401766, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24651633, Length=453, Percent_Identity=25.60706401766, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 56824; Mature: 56693

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWVLGAAIITTIALS
CCCCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YAELGAMFPESGGMVRYSHYSHGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAW
HHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH
AQGLYVQAPGGAGELSVPGLLISAVLVLVYFFLNFWSVKLFARSNTLITMFKLVVPAATG
HCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCC
VALIASGFHSENFSVGIHGDAHVLDLAAVLTAVATAGIVFSFNGFQSPVNLAGEARNPGR
HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHCCCCCCCCCC
SIPFAVLGSIALATVVYVILQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
MLLYIDAFVSPSGTGITYTATTARMVYGMEKNGTMPAALGKLHPVWGVPRMAMFFNLAVS
HHHHHHHHCCCCCCCEEEEEHHHHHHEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH
FVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAPELHRPLRIAALPVLAGVAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH
MATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPTIALV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH
SWAGSTDFGGHGYLSYGTDLAVVAAVGAVFYIWGVRSGWRTPSVEKAVAQA
HCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
SEHSLRRDVGPFALMLTGLGSIIGSGWLFGAWRAAGLAGPGAIWAWVLGAAIITTIALS
CCCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YAELGAMFPESGGMVRYSHYSHGSLVGFIAGWANWIAIVSVIPVEAEASVQYMASWPWAW
HHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH
AQGLYVQAPGGAGELSVPGLLISAVLVLVYFFLNFWSVKLFARSNTLITMFKLVVPAATG
HCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCC
VALIASGFHSENFSVGIHGDAHVLDLAAVLTAVATAGIVFSFNGFQSPVNLAGEARNPGR
HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHCCCCCCCCCC
SIPFAVLGSIALATVVYVILQVAYIGAVPPDLLAKAGWHGIDFRSPFAELAIIVNLHWLA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
MLLYIDAFVSPSGTGITYTATTARMVYGMEKNGTMPAALGKLHPVWGVPRMAMFFNLAVS
HHHHHHHHCCCCCCCEEEEEHHHHHHEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH
FVFLFFFRGWGTLAAVISVATIISYLTGPISAMALRRHAPELHRPLRIAALPVLAGVAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH
MATELLYWARWPLTGEIILLMVVALPVYCYYQAKQGWPDLRRNLKGAAWMICYLPTIALV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHH
SWAGSTDFGGHGYLSYGTDLAVVAAVGAVFYIWGVRSGWRTPSVEKAVAQA
HCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]