| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244221
Identifier: 21244221
GI number: 21244221
Start: 4133687
End: 4134358
Strand: Direct
Name: 21244221
Synonym: XAC3496
Alternate gene names: NA
Gene position: 4133687-4134358 (Clockwise)
Preceding gene: 21244220
Following gene: 21244222
Centisome position: 79.87
GC content: 66.96
Gene sequence:
>672_bases ATGAGCCGCGCGCAGGCGCTGGCGATCGCGCGCGCGTTTTTGCCGCCGCATCCGTTGGGCAATCGCTACGACTATTACTA CACCCAGGCCAAGCTGCGCACCGATCCGCTGTATCCGGGCGTGCTTGCCGAGTTGCGCAGCACCACCGCGCCCGTGCTGG ATCTGGGCTGCGGGCTGGGCCTGCTCGCGCATGCATTGCGTGCCGATGGCCAGGCACTGGCGTATCACGGGGTGGATGTG GATGCGTCCAAGATTCGCCGCGCGCAACACATCGCGCAGCGCTCGGCATTGGGCAATACGCAGTTTGCCGTGGTCGATCT GAGCGTGGCCTGGCCGCAGCACCGCGGCAGCGTGACCATTCTGGACGTGCTGCAGTATCTGCAGGCCGACATGCAGGCCA GCCTGCTGCGCAGCGTGGCGCAGATGCTGACGCCGGGCGCGAAGCTGGTGATCCGCAGCGCATTGGGCGATGCCAGCAGC CGTGGCCGCACCAGCCGCGTGACCGACGTGCTAGCGCATCTGAGCGGCTGGATGCAGCGCATGCCGCGCAGCTATCCCAC CCGCGACAGCCTGCAAGCGCAGCTGGACGCTGCTGGTCTGCGCGCGACATTTGCGCCGTTGTACGGCAACACGCCATTCA ACAACTGGTTGATCGTGGCCGAGCCGCGCTGA
Upstream 100 bases:
>100_bases CATGCGTGGGCAGCCCCCATCGCGTTAGCAGGGCCCAAGCTCGCCGCGCACCAAGCCTCATTGCCAGGGAACGACATTGC ACAGCACCGCCACCCAACCC
Downstream 100 bases:
>100_bases GGCCGTGCACAACATGCCTGGCTCGCTTTAGAACGGCTGATGAGACGTAACGCGCGGTCGCCGGACGGATGTGGACGGCA CGCAGAAACCGGGGTGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSRAQALAIARAFLPPHPLGNRYDYYYTQAKLRTDPLYPGVLAELRSTTAPVLDLGCGLGLLAHALRADGQALAYHGVDV DASKIRRAQHIAQRSALGNTQFAVVDLSVAWPQHRGSVTILDVLQYLQADMQASLLRSVAQMLTPGAKLVIRSALGDASS RGRTSRVTDVLAHLSGWMQRMPRSYPTRDSLQAQLDAAGLRATFAPLYGNTPFNNWLIVAEPR
Sequences:
>Translated_223_residues MSRAQALAIARAFLPPHPLGNRYDYYYTQAKLRTDPLYPGVLAELRSTTAPVLDLGCGLGLLAHALRADGQALAYHGVDV DASKIRRAQHIAQRSALGNTQFAVVDLSVAWPQHRGSVTILDVLQYLQADMQASLLRSVAQMLTPGAKLVIRSALGDASS RGRTSRVTDVLAHLSGWMQRMPRSYPTRDSLQAQLDAAGLRATFAPLYGNTPFNNWLIVAEPR >Mature_222_residues SRAQALAIARAFLPPHPLGNRYDYYYTQAKLRTDPLYPGVLAELRSTTAPVLDLGCGLGLLAHALRADGQALAYHGVDVD ASKIRRAQHIAQRSALGNTQFAVVDLSVAWPQHRGSVTILDVLQYLQADMQASLLRSVAQMLTPGAKLVIRSALGDASSR GRTSRVTDVLAHLSGWMQRMPRSYPTRDSLQAQLDAAGLRATFAPLYGNTPFNNWLIVAEPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24330; Mature: 24199
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAQALAIARAFLPPHPLGNRYDYYYTQAKLRTDPLYPGVLAELRSTTAPVLDLGCGLG CCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHCHHH LLAHALRADGQALAYHGVDVDASKIRRAQHIAQRSALGNTQFAVVDLSVAWPQHRGSVTI HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHH LDVLQYLQADMQASLLRSVAQMLTPGAKLVIRSALGDASSRGRTSRVTDVLAHLSGWMQR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH MPRSYPTRDSLQAQLDAAGLRATFAPLYGNTPFNNWLIVAEPR CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC >Mature Secondary Structure SRAQALAIARAFLPPHPLGNRYDYYYTQAKLRTDPLYPGVLAELRSTTAPVLDLGCGLG CHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHCHHH LLAHALRADGQALAYHGVDVDASKIRRAQHIAQRSALGNTQFAVVDLSVAWPQHRGSVTI HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHH LDVLQYLQADMQASLLRSVAQMLTPGAKLVIRSALGDASSRGRTSRVTDVLAHLSGWMQR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH MPRSYPTRDSLQAQLDAAGLRATFAPLYGNTPFNNWLIVAEPR CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA