| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244168
Identifier: 21244168
GI number: 21244168
Start: 4054139
End: 4055287
Strand: Direct
Name: 21244168
Synonym: XAC3443
Alternate gene names: NA
Gene position: 4054139-4055287 (Clockwise)
Preceding gene: 21244167
Following gene: 21244173
Centisome position: 78.33
GC content: 67.01
Gene sequence:
>1149_bases GTGTCTGTCACCGGTGACTTCTGGGGAAGTGTCTTGCGTATTCTGTTTGTTGGGGACGAAGCCAGTCTTCCGTCCGACCT TGTCGACTATGTCGCCGACCTGGGCGACCAGTGGCAGGCGCAGCAGGTGGCCGATGGCAATTCGGCGATCGAAGCTGCCG CGCTGTCGCCGTTCGACGCCGTCATCGTTGCCCCGGTGCTGCCGGACCTGACTGCCGCCACCTTGCTGGGGCAAATCCGC ACGCTGCGCCCGGACACCATTCGTATTGCGTTGATCGATGCGCAAGGCGGCCAGCGCACGCCGCCGGCCCGCATCATCGG CGTGGCGCATCGCTTCTTGCCGATGCCGCTGGCACCCGAAGTGCTGCTCGAAGCGGTCACCAGCCTGGAAGAACTGCGCG AGCTGCTCAGCAATCCGCGCCTGCGCGCGGCGATCGGGCGGATCGAAAAGCTGCCCTCGCCTCCGCATTTGTACCTGAGC CTGATGCATGCGCTGGAAGAGGACGACGGCGCCGATGCGGCCGATATCGCCAAGCTGATCGCCGGCGACCCGGCGATCGC GGCGAAAGTGCTGCAATTGTGCAATTCGGCGTTCTTTTCCGGTGGCCGCAGCATTACCGATCTGCGCACGGCGGTGACCC GCCTGGGCGTGGCGACGCTGCGCGATCTGGTACTGGCCAGCGAAGTGTTTTCGGTCCAGACGCTCACACCGGCCGAGCGC AACGCGATGCAGCGCCGCGCCCTGCTCTCCTCGCGCCTGGCGGCCAAGGTGCTTCCGCCGACCAGCGCAGAACTCGGTTC CACCGCCGCATTGCTGGCCGACATCGGCCTGCTGCTGCCGGGCGTGCGCGACGAGCGCGAAGCCCCGGCCGAAGCCGGCG ACGAACGCCTGGGTCACACCGAAGCCGGCGCCTACCTGCTCGGCCTGTGGGGCTTGCCGATGCCCATCATCGAAGCGGTG GCCTTCCATCGCCATCCGCTGCGTTCCAGCATGCGCAGCTTCTGGGTCACCGGCGCAGTGCATGTCGCCACGGCATTGGC CAGCGGCGAAAGCGTGGACGAAGAGTACCTGACCAAGGTCGGCGTCATCGCGCGCCTGCCAAGCTGGCGCGAACAGGCCG ACACGTTGCTGGGGCTTACCGAGGCGTAG
Upstream 100 bases:
>100_bases GCTGCCCTGCGTGTAGGGCGGGCGACCGGGATCACGCTTCTGGCGTGATCCCGGTGACCGCAGTCGGCAGATTGGGTACA TTGCCGAAAGCGTTTGGCCG
Downstream 100 bases:
>100_bases GTTAGTCGCATGCGGCGTGCCTGAAAAAAACGCGGCCAGGGCCGCGTTTTTTATGCCGCTTCTTCCACCGCCCCCCCTGC ATGGAGCCGTTGCGCCAGGG
Product: response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSVTGDFWGSVLRILFVGDEASLPSDLVDYVADLGDQWQAQQVADGNSAIEAAALSPFDAVIVAPVLPDLTAATLLGQIR TLRPDTIRIALIDAQGGQRTPPARIIGVAHRFLPMPLAPEVLLEAVTSLEELRELLSNPRLRAAIGRIEKLPSPPHLYLS LMHALEEDDGADAADIAKLIAGDPAIAAKVLQLCNSAFFSGGRSITDLRTAVTRLGVATLRDLVLASEVFSVQTLTPAER NAMQRRALLSSRLAAKVLPPTSAELGSTAALLADIGLLLPGVRDEREAPAEAGDERLGHTEAGAYLLGLWGLPMPIIEAV AFHRHPLRSSMRSFWVTGAVHVATALASGESVDEEYLTKVGVIARLPSWREQADTLLGLTEA
Sequences:
>Translated_382_residues MSVTGDFWGSVLRILFVGDEASLPSDLVDYVADLGDQWQAQQVADGNSAIEAAALSPFDAVIVAPVLPDLTAATLLGQIR TLRPDTIRIALIDAQGGQRTPPARIIGVAHRFLPMPLAPEVLLEAVTSLEELRELLSNPRLRAAIGRIEKLPSPPHLYLS LMHALEEDDGADAADIAKLIAGDPAIAAKVLQLCNSAFFSGGRSITDLRTAVTRLGVATLRDLVLASEVFSVQTLTPAER NAMQRRALLSSRLAAKVLPPTSAELGSTAALLADIGLLLPGVRDEREAPAEAGDERLGHTEAGAYLLGLWGLPMPIIEAV AFHRHPLRSSMRSFWVTGAVHVATALASGESVDEEYLTKVGVIARLPSWREQADTLLGLTEA >Mature_381_residues SVTGDFWGSVLRILFVGDEASLPSDLVDYVADLGDQWQAQQVADGNSAIEAAALSPFDAVIVAPVLPDLTAATLLGQIRT LRPDTIRIALIDAQGGQRTPPARIIGVAHRFLPMPLAPEVLLEAVTSLEELRELLSNPRLRAAIGRIEKLPSPPHLYLSL MHALEEDDGADAADIAKLIAGDPAIAAKVLQLCNSAFFSGGRSITDLRTAVTRLGVATLRDLVLASEVFSVQTLTPAERN AMQRRALLSSRLAAKVLPPTSAELGSTAALLADIGLLLPGVRDEREAPAEAGDERLGHTEAGAYLLGLWGLPMPIIEAVA FHRHPLRSSMRSFWVTGAVHVATALASGESVDEEYLTKVGVIARLPSWREQADTLLGLTEA
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 40675; Mature: 40544
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTGDFWGSVLRILFVGDEASLPSDLVDYVADLGDQWQAQQVADGNSAIEAAALSPFDA CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCHHH VIVAPVLPDLTAATLLGQIRTLRPDTIRIALIDAQGGQRTPPARIIGVAHRFLPMPLAPE HHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHH VLLEAVTSLEELRELLSNPRLRAAIGRIEKLPSPPHLYLSLMHALEEDDGADAADIAKLI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH AGDPAIAAKVLQLCNSAFFSGGRSITDLRTAVTRLGVATLRDLVLASEVFSVQTLTPAER CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH NAMQRRALLSSRLAAKVLPPTSAELGSTAALLADIGLLLPGVRDEREAPAEAGDERLGHT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHCCCH EAGAYLLGLWGLPMPIIEAVAFHRHPLRSSMRSFWVTGAVHVATALASGESVDEEYLTKV HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GVIARLPSWREQADTLLGLTEA HHHHHCCCHHHHHHHHHCCCCC >Mature Secondary Structure SVTGDFWGSVLRILFVGDEASLPSDLVDYVADLGDQWQAQQVADGNSAIEAAALSPFDA CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCHHH VIVAPVLPDLTAATLLGQIRTLRPDTIRIALIDAQGGQRTPPARIIGVAHRFLPMPLAPE HHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHH VLLEAVTSLEELRELLSNPRLRAAIGRIEKLPSPPHLYLSLMHALEEDDGADAADIAKLI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH AGDPAIAAKVLQLCNSAFFSGGRSITDLRTAVTRLGVATLRDLVLASEVFSVQTLTPAER CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH NAMQRRALLSSRLAAKVLPPTSAELGSTAALLADIGLLLPGVRDEREAPAEAGDERLGHT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHCCCH EAGAYLLGLWGLPMPIIEAVAFHRHPLRSSMRSFWVTGAVHVATALASGESVDEEYLTKV HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GVIARLPSWREQADTLLGLTEA HHHHHCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]