| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244039
Identifier: 21244039
GI number: 21244039
Start: 3898982
End: 3900325
Strand: Direct
Name: 21244039
Synonym: XAC3314
Alternate gene names: NA
Gene position: 3898982-3900325 (Clockwise)
Preceding gene: 21244038
Following gene: 21244044
Centisome position: 75.33
GC content: 61.61
Gene sequence:
>1344_bases ATGCCACCCTTGCTTCGCACACCGGCCACCGTAAGCGTCGCACCCACCCAACGCGACGCGCTTGGCGCGTCGCTGGCTGC ATCGCGGGCATTCCCGCAGGTCACGCGCGACTTCAAGGCGTTTCTGGATGCGCAGGCGCAGCTCAGTTACGCCACACGTG GTGCTGCGGCCAAGGTCAGCGACCCCACCGCCTTCGCCGAAATGCAGCGTTATCTGTTCAATCGTTACAACGGTCTGACC GTGCTGCGCAGCGTGCAACAGGACGGCAAGGTGTTCGATTGCATTCCAAGTGCGCAGCAACCTGCCTTGCGCGATGGCAG CACGCCGGCGGCACCACCCTCCCTCTCAAGTAACAAGGGTACGGTGGCGCCGGTCAACCTGGGTCAACGTTGCGACACCG GCAGCGTGCCGTTCGAACGCATCGGCTTGGCCGAGATGAGCAAGCATGCGAATCTGCGTAGCTTTCTACGCGGCACGACC CCGCGCGCGATCGCTCCCAGGCAGGCTGACGCCGTGCCGGCGGTGCAGGAAGCAGCGCCGGTAACGCATTACTACTCCAG CGTCTTTCTGGATACCGCCGGCACATCGGTCACAGGCGCCGGAGCCGACATCAATCTTTGGGCACCCACGTTACGCTCCA CCAACGAGAAACAAACCATCAGTCAGATATGGATCGTTGGTGAAAGCGCAAGCGAGCAAGTGCAAACACTTGAAGTGGGC TGGGAGATCCAGCCAGACGCAGGCTGGGGCAACAAGCCCATCGTTTTCATTTATTCCACCCAGGACGGTTACGTCACTAC AGGTTGTCATAATCTGGATTGCAGCGATTTCGTGCAGACCAGCACGCGACATGTCCTGGGCGCTCAGCCGGCCGCAGGAT TCAGTATTGCAGGCGGCAAGCAGACCATGCTGGGTGTCGAATTCCAGAAGAATACCGACGGCAACTGGTGGCTGCGCCTG GACGGCGAATGGATCGGTTACTACAAGGCATCACTGTATTCGGGCGATCTCGCCAATGGACGCGTTGCGTACGTGAGCGC GGGCGGCGAAGTCTCGACCAACAGCGGTGTAGCCAGCACACGCATGGGGAGCGGTCAGTTCGCAGCGGCCGGCTATCGCC AGGCCGCATTCCAGGCCAACCACTTCTACCGCGATGCGGCGATGGTCACCCACCCCGTGCAGCGCCTGTCGTCGCTGAGC GTGGAGCATCCGTCCTGCTACACGCTGGCGATGGCCGGTTACAGCTATCCGTATGCCTTGGATGCCGGCGTCACCCGCAC CGGCTTGTCGCCAGAAATGCAGAATGGTGGTTTCTATTTCGGTGGGCCAGGCTGCGAACGCTGA
Upstream 100 bases:
>100_bases TGCTGCGCTTTGCGTTTTTGCACTGGCTCCCACAGCCGGCGCCGCCACGCTGCTATCGCCATCGATCTCGACGACCAGCG ACCGCAGCATCGATACACTG
Downstream 100 bases:
>100_bases ATCGAGTTGCGTTGGGTCGATCGCGCGCACCGTTGCGCGCGCGCGATCGATTAGGGCAACTCCACGCCTGCACACACCGC CGGGCGCGCATCCCTGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MPPLLRTPATVSVAPTQRDALGASLAASRAFPQVTRDFKAFLDAQAQLSYATRGAAAKVSDPTAFAEMQRYLFNRYNGLT VLRSVQQDGKVFDCIPSAQQPALRDGSTPAAPPSLSSNKGTVAPVNLGQRCDTGSVPFERIGLAEMSKHANLRSFLRGTT PRAIAPRQADAVPAVQEAAPVTHYYSSVFLDTAGTSVTGAGADINLWAPTLRSTNEKQTISQIWIVGESASEQVQTLEVG WEIQPDAGWGNKPIVFIYSTQDGYVTTGCHNLDCSDFVQTSTRHVLGAQPAAGFSIAGGKQTMLGVEFQKNTDGNWWLRL DGEWIGYYKASLYSGDLANGRVAYVSAGGEVSTNSGVASTRMGSGQFAAAGYRQAAFQANHFYRDAAMVTHPVQRLSSLS VEHPSCYTLAMAGYSYPYALDAGVTRTGLSPEMQNGGFYFGGPGCER
Sequences:
>Translated_447_residues MPPLLRTPATVSVAPTQRDALGASLAASRAFPQVTRDFKAFLDAQAQLSYATRGAAAKVSDPTAFAEMQRYLFNRYNGLT VLRSVQQDGKVFDCIPSAQQPALRDGSTPAAPPSLSSNKGTVAPVNLGQRCDTGSVPFERIGLAEMSKHANLRSFLRGTT PRAIAPRQADAVPAVQEAAPVTHYYSSVFLDTAGTSVTGAGADINLWAPTLRSTNEKQTISQIWIVGESASEQVQTLEVG WEIQPDAGWGNKPIVFIYSTQDGYVTTGCHNLDCSDFVQTSTRHVLGAQPAAGFSIAGGKQTMLGVEFQKNTDGNWWLRL DGEWIGYYKASLYSGDLANGRVAYVSAGGEVSTNSGVASTRMGSGQFAAAGYRQAAFQANHFYRDAAMVTHPVQRLSSLS VEHPSCYTLAMAGYSYPYALDAGVTRTGLSPEMQNGGFYFGGPGCER >Mature_446_residues PPLLRTPATVSVAPTQRDALGASLAASRAFPQVTRDFKAFLDAQAQLSYATRGAAAKVSDPTAFAEMQRYLFNRYNGLTV LRSVQQDGKVFDCIPSAQQPALRDGSTPAAPPSLSSNKGTVAPVNLGQRCDTGSVPFERIGLAEMSKHANLRSFLRGTTP RAIAPRQADAVPAVQEAAPVTHYYSSVFLDTAGTSVTGAGADINLWAPTLRSTNEKQTISQIWIVGESASEQVQTLEVGW EIQPDAGWGNKPIVFIYSTQDGYVTTGCHNLDCSDFVQTSTRHVLGAQPAAGFSIAGGKQTMLGVEFQKNTDGNWWLRLD GEWIGYYKASLYSGDLANGRVAYVSAGGEVSTNSGVASTRMGSGQFAAAGYRQAAFQANHFYRDAAMVTHPVQRLSSLSV EHPSCYTLAMAGYSYPYALDAGVTRTGLSPEMQNGGFYFGGPGCER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47747; Mature: 47616
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLLRTPATVSVAPTQRDALGASLAASRAFPQVTRDFKAFLDAQAQLSYATRGAAAKVS CCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DPTAFAEMQRYLFNRYNGLTVLRSVQQDGKVFDCIPSAQQPALRDGSTPAAPPSLSSNKG CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC TVAPVNLGQRCDTGSVPFERIGLAEMSKHANLRSFLRGTTPRAIAPRQADAVPAVQEAAP CEEECCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCC VTHYYSSVFLDTAGTSVTGAGADINLWAPTLRSTNEKQTISQIWIVGESASEQVQTLEVG HHHHHHHEEEECCCCEEECCCCEEEEECCCCCCCCCHHEEEEEEEECCCCHHCEEEEEEC WEIQPDAGWGNKPIVFIYSTQDGYVTTGCHNLDCSDFVQTSTRHVLGAQPAAGFSIAGGK CEECCCCCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCC QTMLGVEFQKNTDGNWWLRLDGEWIGYYKASLYSGDLANGRVAYVSAGGEVSTNSGVAST EEEEEEEEEECCCCCEEEEECCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEE RMGSGQFAAAGYRQAAFQANHFYRDAAMVTHPVQRLSSLSVEHPSCYTLAMAGYSYPYAL CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEE DAGVTRTGLSPEMQNGGFYFGGPGCER CCCCCCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure PPLLRTPATVSVAPTQRDALGASLAASRAFPQVTRDFKAFLDAQAQLSYATRGAAAKVS CCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DPTAFAEMQRYLFNRYNGLTVLRSVQQDGKVFDCIPSAQQPALRDGSTPAAPPSLSSNKG CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC TVAPVNLGQRCDTGSVPFERIGLAEMSKHANLRSFLRGTTPRAIAPRQADAVPAVQEAAP CEEECCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCC VTHYYSSVFLDTAGTSVTGAGADINLWAPTLRSTNEKQTISQIWIVGESASEQVQTLEVG HHHHHHHEEEECCCCEEECCCCEEEEECCCCCCCCCHHEEEEEEEECCCCHHCEEEEEEC WEIQPDAGWGNKPIVFIYSTQDGYVTTGCHNLDCSDFVQTSTRHVLGAQPAAGFSIAGGK CEECCCCCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCC QTMLGVEFQKNTDGNWWLRLDGEWIGYYKASLYSGDLANGRVAYVSAGGEVSTNSGVAST EEEEEEEEEECCCCCEEEEECCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEE RMGSGQFAAAGYRQAAFQANHFYRDAAMVTHPVQRLSSLSVEHPSCYTLAMAGYSYPYAL CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEE DAGVTRTGLSPEMQNGGFYFGGPGCER CCCCCCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA