Click here to switch to the map view.

The map label for this gene is cvgSY [C]

Identifier: 21244018

GI number: 21244018

Start: 3869894

End: 3871150

Strand: Reverse

Name: cvgSY [C]

Synonym: XAC3292

Alternate gene names: 21244018

Gene position: 3871150-3869894 (Counterclockwise)

Preceding gene: 21244023

Following gene: 21244014

Centisome position: 74.8

GC content: 61.34

Gene sequence:

>1257_bases
ATGCTTCCCTCTCAAGACCGCTACCGCCAGATCGTCGAGCTGTATCCGGACTCCATCAAAGAAATTGCTCTCGACGGCAA
GGTGCGTTTTGTGAACTCCCACGGGGTCGCGCGGATCGCTGTGGAGAATGCGGAGCGTGTGCTAGGGCAGCAATGGTCGT
CTCTATGGCCTGAAGAGGTCCGCGACACCGTCGAAGAGGCAATCTCCGCAGCTTCTCGTGGGGAACGGCGGCAGTTCGAT
GCGGCCTGCATAACCCCCAGCGGTGAGCGCCGGTTCTGGCTGGTTTCTACTAGTCCGCTGACCAATGCCGACGGGGAAAT
CGAAGCCGTCCTGGCCGTCAATCGAGACGTAACCGAGCGCCGCCAGGCTGAAGTGGCGCTGCGCACGCTCAATGAGAGCT
TGAGCAGTCAGCCTAAACTAGCCTTGGCCCACGCCGAGCTGGCCGATGCCATTGATGAGAAGTTGGGCCATGCCAACCAG
CGGGCACAGCAACTGGAGGGGGAGCTCAATATTGCAAAGGCCGCCCAGCGTATGGCTGAGGCAATCGCAGAGCAGGCACA
GAAGGGGGACGCGATTGGTCAGCTGTTGGCAGGGATGGTGCACGACTTCAACAACGTGCTGCAGGCGGCCTCCGGTGCGG
TGGAGATGGTGCTTCTGAGCCAGGGTATCGACGATAAGAATCGCAAGCTTTTGGGCATGGCAGAAAGCGCGTTGCAGCAA
GGGGCGACCATGTCGCAGCGGCTGCTCGGCTTTGCCCGGCAGCACCCTTATCTGCCAGAGAACGTTGACGTCGGCCGGGT
CGTGCAGGGGATGCTGCCGCTGCTGAACCAAGCCGTGGGTCTCGGCATCACGATCGACTTCCGAGCGGAATCCAACCTCC
CCCTGGCTATGGTGGATCTGCACAGTCTGGAACGGGCCATCATGAACCTGGTGGTGAACGCCCGGGATGCGTGCTACGAT
GCAGGCACCATCACCATTTCTACGGAAAGTTGTTCCATCGGGCGTGTGCCCGACGGCGCATCCCATTCGCCTGGCCGCTA
TGTGCTCGTGAAGGTTCACGACACCGGCCAAGGCATTGCGCCAGAGGTGCTTGGGCGGCTGTTCGAAGCCTACTTCACCA
CCAAGCCGCAGGGAAAAGGAACGGGCTTGGGCCTCTCTCAGGTCTACGGCACGATCCGTCGCGCCAACGGCTTCGTCGAT
GTCGAGTCAAAGCCGGGGCAGGGCGCGTGCTTCACCTTGGGCGTTCCTTGTCCTTGA

Upstream 100 bases:

>100_bases
AAGCCATGGGGGTCGTCTGGTGGCGGATCTAGCTATCGACACTGGCCCCTACAGTGCAAAATGCGCGTGATTGCCGAACT
GCCCCTATTGAATGATCCAG

Downstream 100 bases:

>100_bases
TGAAAGCCGTATTGCGGCGCCTGGAGCGCCGCAGCAGGCCACCGTCGCATTCTTGAGGAGTGTTTGCTGTCTAGCGCGTC
AGTTGCGCATACAGCACAAA

Product: histidine kinase-response regulator hybrid protein

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MLPSQDRYRQIVELYPDSIKEIALDGKVRFVNSHGVARIAVENAERVLGQQWSSLWPEEVRDTVEEAISAASRGERRQFD
AACITPSGERRFWLVSTSPLTNADGEIEAVLAVNRDVTERRQAEVALRTLNESLSSQPKLALAHAELADAIDEKLGHANQ
RAQQLEGELNIAKAAQRMAEAIAEQAQKGDAIGQLLAGMVHDFNNVLQAASGAVEMVLLSQGIDDKNRKLLGMAESALQQ
GATMSQRLLGFARQHPYLPENVDVGRVVQGMLPLLNQAVGLGITIDFRAESNLPLAMVDLHSLERAIMNLVVNARDACYD
AGTITISTESCSIGRVPDGASHSPGRYVLVKVHDTGQGIAPEVLGRLFEAYFTTKPQGKGTGLGLSQVYGTIRRANGFVD
VESKPGQGACFTLGVPCP

Sequences:

>Translated_418_residues
MLPSQDRYRQIVELYPDSIKEIALDGKVRFVNSHGVARIAVENAERVLGQQWSSLWPEEVRDTVEEAISAASRGERRQFD
AACITPSGERRFWLVSTSPLTNADGEIEAVLAVNRDVTERRQAEVALRTLNESLSSQPKLALAHAELADAIDEKLGHANQ
RAQQLEGELNIAKAAQRMAEAIAEQAQKGDAIGQLLAGMVHDFNNVLQAASGAVEMVLLSQGIDDKNRKLLGMAESALQQ
GATMSQRLLGFARQHPYLPENVDVGRVVQGMLPLLNQAVGLGITIDFRAESNLPLAMVDLHSLERAIMNLVVNARDACYD
AGTITISTESCSIGRVPDGASHSPGRYVLVKVHDTGQGIAPEVLGRLFEAYFTTKPQGKGTGLGLSQVYGTIRRANGFVD
VESKPGQGACFTLGVPCP
>Mature_418_residues
MLPSQDRYRQIVELYPDSIKEIALDGKVRFVNSHGVARIAVENAERVLGQQWSSLWPEEVRDTVEEAISAASRGERRQFD
AACITPSGERRFWLVSTSPLTNADGEIEAVLAVNRDVTERRQAEVALRTLNESLSSQPKLALAHAELADAIDEKLGHANQ
RAQQLEGELNIAKAAQRMAEAIAEQAQKGDAIGQLLAGMVHDFNNVLQAASGAVEMVLLSQGIDDKNRKLLGMAESALQQ
GATMSQRLLGFARQHPYLPENVDVGRVVQGMLPLLNQAVGLGITIDFRAESNLPLAMVDLHSLERAIMNLVVNARDACYD
AGTITISTESCSIGRVPDGASHSPGRYVLVKVHDTGQGIAPEVLGRLFEAYFTTKPQGKGTGLGLSQVYGTIRRANGFVD
VESKPGQGACFTLGVPCP

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=235, Percent_Identity=29.7872340425532, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=29.2372881355932, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI145693157, Length=268, Percent_Identity=26.4925373134328, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 45170; Mature: 45170

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSQDRYRQIVELYPDSIKEIALDGKVRFVNSHGVARIAVENAERVLGQQWSSLWPEEV
CCCCHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCEEEEEHHHHHHHHHHHHHCCCHHHH
RDTVEEAISAASRGERRQFDAACITPSGERRFWLVSTSPLTNADGEIEAVLAVNRDVTER
HHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHH
RQAEVALRTLNESLSSQPKLALAHAELADAIDEKLGHANQRAQQLEGELNIAKAAQRMAE
HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH
AIAEQAQKGDAIGQLLAGMVHDFNNVLQAASGAVEMVLLSQGIDDKNRKLLGMAESALQQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHCCCCCCCCHHHHHHHHHHHC
GATMSQRLLGFARQHPYLPENVDVGRVVQGMLPLLNQAVGLGITIDFRAESNLPLAMVDL
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHH
HSLERAIMNLVVNARDACYDAGTITISTESCSIGRVPDGASHSPGRYVLVKVHDTGQGIA
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
PEVLGRLFEAYFTTKPQGKGTGLGLSQVYGTIRRANGFVDVESKPGQGACFTLGVPCP
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCC
>Mature Secondary Structure
MLPSQDRYRQIVELYPDSIKEIALDGKVRFVNSHGVARIAVENAERVLGQQWSSLWPEEV
CCCCHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCEEEEEHHHHHHHHHHHHHCCCHHHH
RDTVEEAISAASRGERRQFDAACITPSGERRFWLVSTSPLTNADGEIEAVLAVNRDVTER
HHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHH
RQAEVALRTLNESLSSQPKLALAHAELADAIDEKLGHANQRAQQLEGELNIAKAAQRMAE
HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH
AIAEQAQKGDAIGQLLAGMVHDFNNVLQAASGAVEMVLLSQGIDDKNRKLLGMAESALQQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHCCCCCCCCHHHHHHHHHHHC
GATMSQRLLGFARQHPYLPENVDVGRVVQGMLPLLNQAVGLGITIDFRAESNLPLAMVDL
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHH
HSLERAIMNLVVNARDACYDAGTITISTESCSIGRVPDGASHSPGRYVLVKVHDTGQGIA
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
PEVLGRLFEAYFTTKPQGKGTGLGLSQVYGTIRRANGFVDVESKPGQGACFTLGVPCP
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA