| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244006
Identifier: 21244006
GI number: 21244006
Start: 3862079
End: 3862546
Strand: Reverse
Name: 21244006
Synonym: XAC3280
Alternate gene names: NA
Gene position: 3862546-3862079 (Counterclockwise)
Preceding gene: 21244007
Following gene: 21244005
Centisome position: 74.63
GC content: 63.46
Gene sequence:
>468_bases ATGACTCCACTGACTTTTAGCGCTCCAGGTTATGCCCTCCTGCAGGCGACCATGCAGTGCTGGAAGTGTGCGAAGGCCAC TCCCGTCACAACGGTGTGGGTGCCTTCCTTCGTCGACAACGAGGGTGTGGAAGAGCCAGACGACGAGCCCGAGATAGGTG GCACGGCCATACTGGGCTACATCAAGGCGCTGGACTCAGGCACAGCGGCGCACATCCAAGCGGTTGCACCCTGGCTCAAG CCTGGGCGCTCGAAAACCGCGAGCGCGACCTATTGGGCCAACCACTGTGAAGTATGCGGGGCCATTCAAGGCGACCACTC CGTCAGGGGCGTGGACGGGCCGTTCTTTCCCCAGGATCAGGCTGGCGTGGACGCGCTCCAGGTCATCGCGGGCTGCGGCC CGTTGAGCGCGCAAGCTTCCGCATCCCAGTCCGGGTGGATGGACCTCGTGGCGAAACGTTTGGCCTGA
Upstream 100 bases:
>100_bases GATTTGGCAACCTTCCCAGCCCCCGCATCACGTTTTTGGAGGACGTGGTGCCTTGGCGCTATCGTTCCTGGAATCGCGGT GCATACACCGATACGACCCC
Downstream 100 bases:
>100_bases AGTCGGCACAGCCACACCCGGCAATGGTTGCGTTAAACATCTAGGTCAAGTGGCTCTGACGGCGGGGCCGCAGCCCGGTT GGATGTCCCGTCACTTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTPLTFSAPGYALLQATMQCWKCAKATPVTTVWVPSFVDNEGVEEPDDEPEIGGTAILGYIKALDSGTAAHIQAVAPWLK PGRSKTASATYWANHCEVCGAIQGDHSVRGVDGPFFPQDQAGVDALQVIAGCGPLSAQASASQSGWMDLVAKRLA
Sequences:
>Translated_155_residues MTPLTFSAPGYALLQATMQCWKCAKATPVTTVWVPSFVDNEGVEEPDDEPEIGGTAILGYIKALDSGTAAHIQAVAPWLK PGRSKTASATYWANHCEVCGAIQGDHSVRGVDGPFFPQDQAGVDALQVIAGCGPLSAQASASQSGWMDLVAKRLA >Mature_154_residues TPLTFSAPGYALLQATMQCWKCAKATPVTTVWVPSFVDNEGVEEPDDEPEIGGTAILGYIKALDSGTAAHIQAVAPWLKP GRSKTASATYWANHCEVCGAIQGDHSVRGVDGPFFPQDQAGVDALQVIAGCGPLSAQASASQSGWMDLVAKRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16218; Mature: 16087
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLTFSAPGYALLQATMQCWKCAKATPVTTVWVPSFVDNEGVEEPDDEPEIGGTAILGY CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH IKALDSGTAAHIQAVAPWLKPGRSKTASATYWANHCEVCGAIQGDHSVRGVDGPFFPQDQ HHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC AGVDALQVIAGCGPLSAQASASQSGWMDLVAKRLA CCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TPLTFSAPGYALLQATMQCWKCAKATPVTTVWVPSFVDNEGVEEPDDEPEIGGTAILGY CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH IKALDSGTAAHIQAVAPWLKPGRSKTASATYWANHCEVCGAIQGDHSVRGVDGPFFPQDQ HHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC AGVDALQVIAGCGPLSAQASASQSGWMDLVAKRLA CCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA