| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243994
Identifier: 21243994
GI number: 21243994
Start: 3850060
End: 3850605
Strand: Direct
Name: 21243994
Synonym: XAC3268
Alternate gene names: NA
Gene position: 3850060-3850605 (Clockwise)
Preceding gene: 21243988
Following gene: 21243998
Centisome position: 74.39
GC content: 53.48
Gene sequence:
>546_bases ATGGGTGTCAACCCATTGCTCTGCCCAAGAGTCTACCGCCCTACCCTTCGCCATGGACAGCTGAGCGCGGCCCTTTCCAG CTGTATGGATAGCCATACAATGCAGCAACTTCAGACAAGGATAGGACGCATGCGGAAATACGAACTTGTATCGCAGGAAG ACGAATTGGGTTGTGCGGCTGCCTGCGTGGCATCGATCTTGGACATCCCATACCAGCGGGCAAAGCGCTTACTGGAGAAG GAGAAGTCAGGCGGAATAGACGACCACCCGGAAGGCTTTGAGATAGACGAGATAGCCAATGCTCTTTACAAGAAAGACGT AAAGGTCGTCGCAGACTGGAACCCTCCCGCGAAGCTGCCCAGTGGCACCATCGTGTGTATCTATAGCCGGGTCAGATATA AGAGCTATCACTACCTGCTCAAGGTTCCAGGCGGCTACATGGACCCTTGGTTCGACTTGAAAGATGGAGTCATGGAAGCG CAACTGCGCGCGGAACTACCCAAAGGGACCAAGCTTGTAGTGGCCCTTATTCCGAGCAAGAAATAA
Upstream 100 bases:
>100_bases CGTGGCCTTTTCCGCCTCTGCGGGCATCGGGACGTAACTGGAAGAACTCACCGACCTTGGGTTCGTTGATCGTCTTCGTT TCCATGCGTTCGGTCTCCAT
Downstream 100 bases:
>100_bases GGCTTTTGAGAGGAGCCGTGGCTTGGTGGATGTGAACCTCGGAGCGGCAGCACGGGACTGCCGCTGTCGTCTGCTTCTAG GGACAGGTATGAGGGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MGVNPLLCPRVYRPTLRHGQLSAALSSCMDSHTMQQLQTRIGRMRKYELVSQEDELGCAAACVASILDIPYQRAKRLLEK EKSGGIDDHPEGFEIDEIANALYKKDVKVVADWNPPAKLPSGTIVCIYSRVRYKSYHYLLKVPGGYMDPWFDLKDGVMEA QLRAELPKGTKLVVALIPSKK
Sequences:
>Translated_181_residues MGVNPLLCPRVYRPTLRHGQLSAALSSCMDSHTMQQLQTRIGRMRKYELVSQEDELGCAAACVASILDIPYQRAKRLLEK EKSGGIDDHPEGFEIDEIANALYKKDVKVVADWNPPAKLPSGTIVCIYSRVRYKSYHYLLKVPGGYMDPWFDLKDGVMEA QLRAELPKGTKLVVALIPSKK >Mature_180_residues GVNPLLCPRVYRPTLRHGQLSAALSSCMDSHTMQQLQTRIGRMRKYELVSQEDELGCAAACVASILDIPYQRAKRLLEKE KSGGIDDHPEGFEIDEIANALYKKDVKVVADWNPPAKLPSGTIVCIYSRVRYKSYHYLLKVPGGYMDPWFDLKDGVMEAQ LRAELPKGTKLVVALIPSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20321; Mature: 20190
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVNPLLCPRVYRPTLRHGQLSAALSSCMDSHTMQQLQTRIGRMRKYELVSQEDELGCAA CCCCCCCCCHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ACVASILDIPYQRAKRLLEKEKSGGIDDHPEGFEIDEIANALYKKDVKVVADWNPPAKLP HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC SGTIVCIYSRVRYKSYHYLLKVPGGYMDPWFDLKDGVMEAQLRAELPKGTKLVVALIPSK CCCEEEEEHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC K C >Mature Secondary Structure GVNPLLCPRVYRPTLRHGQLSAALSSCMDSHTMQQLQTRIGRMRKYELVSQEDELGCAA CCCCCCCCHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ACVASILDIPYQRAKRLLEKEKSGGIDDHPEGFEIDEIANALYKKDVKVVADWNPPAKLP HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC SGTIVCIYSRVRYKSYHYLLKVPGGYMDPWFDLKDGVMEAQLRAELPKGTKLVVALIPSK CCCEEEEEHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA