| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243992
Identifier: 21243992
GI number: 21243992
Start: 3846782
End: 3849367
Strand: Reverse
Name: 21243992
Synonym: XAC3266
Alternate gene names: NA
Gene position: 3849367-3846782 (Counterclockwise)
Preceding gene: 21243993
Following gene: 21243991
Centisome position: 74.38
GC content: 64.58
Gene sequence:
>2586_bases ATGCCGAACTATCGGACGCTTTTTCAAGATCACCACAACATTGAACAGCAGACGCTCAAGAACAGCGAGTTGCTGGCGAA GCTTCAAGAGACGGGCCGGTTCGACATTCACGCCCCAGAGAATCGCCTGTTCTTGCCGTCCGATCCGCAGTTCGCTCAGG CGTTGGACATTACGCCGCACAGCGGCGGTCCTCTTGGTGCTTACCAAGATGGCGTGATTGAGCGCTTGGACGATCTCCAG GCGACGCGGGATGGTCGCGCCGCCTTGCGTGGTGACCCTGAAGCATTGGAGCGCGTTGCCCAGCGTGTGGAGCAATTGCG CGACACCATCAAGGTCGGCTTGATCAATGGCGACTTGAACACCAATACGCCAGTGGGGCTTTCGCCCTCACAGGCGAGCG CGAAAGTTCAGAACTTTTTCCGTGACACCCCGGGCTATCACCAGGCCCACGCTCCACAGATCGATGCTCTGAAAGGTTTC ACGGGAGTGGACCACGGCTGGGGTGGCGTGGCGAACTCTGAGTCCCGCATTGTCACCGCGCTCGATCAGATCCAGGTCAG CAGCACGGCCATTGCGCGTGGAGGGAATCCAACGCTGCAACGAAGTGGGCTCTCGGTTGCCATCGCCAATGCCCATCACG ACGGACGTGTGGTGCTGTCAGAGCAGGGCCTCCTCAAGGTTGAGCAAACCTTGGGTGAGGAAGCTGCACAAAACCTCCGA GTGCCGCGCGGGCAGCGCGGTGATGTCGCCATGCAGCTGTTGATGGGCGAGGCTTCTGCTCGGGGCCTGACCCGTGCCGG CGGACTTTTGACCACCGGCGCGGATGCCGTCATGACCGCGCGCACGGCGTCGGCATTGATGGAGCAGGGCAACACGACGG CCGCCCAGTCGGAGGTTCAGCACGCCATTGCCCGTAACGCAGGCGGCTGGGCTGGTGGTGCTTCCACAGCGGCCGCGCTG GGCAGCAGCGGTGGCTTTGTGCCTGCGGCCTTGGTGGTTGGCGACGCGGTCCTGATGAGCAAGGCCTTCGACAAAGGCGC TGACTTGTTGGACAACCGCGCCATCTACCACCAGACCGACAAGGCGGGCGTAGAGTGGCAGTTCAACGGACGGGATTGGG AACGCCAGGGCGCTTTCGAGCGCGCGGCCGATGGACGAGACACTCCCAGTCAGGCTCCGGTGGGAGCCAGCTACGCCAAG TCCCAAGAGTTGGGTGCCATGGCGAACGCCAAGGCCGCCGAGTTGGCGTTGGGCAAGGCGCCGCCGCCGCAGGATCCGTT CAATCTCCCGGCCAAGCCGAGCGACCAGACGGGATTGGACAACCAAAACTGGCAACGCAATCCGGCCACTGAGTCCTGGG AGCGCCAAGTCAAGACCGGCCCGGCGGGTGCCAACGACCGTGGCGTCTACGAGCCACAGATAGCCAGCCCGGAGCAAACC CAGCGCCTGAACCAGGAAGCCCTGGGGCGCATCGAGAACAACATCGCCACCGGTCGCGAGGCCATCGCCCAGGCCTACCT GGAAAGCCATGCCGCCCAGCGTGGGCAGGACTACGGGGTTGCAGTGCCGGAAGCCGTAGAGAGCGCCCGGGCAAAGCCCG ACCAGGTCCAGGGCCATAACGGCCAGCTCTACCAGCGCAACGAGGCTGGGCAATGGGCGGGCAAGGACGGAGTGGCCGCC GGCAACCTGGCGGTGGAACTGGAGCTGACGAATCAGATGCGCCAGCCCTCGCTGGAGCGCGCCCAGGAAACCTTAGCGGC CATTGAGGCTCGCCCAGCGCCCACGCCGGCGCAGATGGAGCACAACGAGCTCCTGCATCGCTACCGGGCCGCGGGGGTCG ACCTCAACGCTCAGGAGAATAACCTTCAGGCGGTGGAGCTGGCCACCCAGCGCACTAAGCATTCCGAAGGCCTTGCCGGC CCGACGATGCAGCAGCTGAAGCCGAACGAGCAGGGGCAATACGGCTACGACAGTCCCATTGCCCATTACCAAGTTGACCA AGACGGGGTTGCCCACCAGGTCGCGTTGACGACCGCTGAGGAGCTACGCCAGGCCAAGGCCGAGCTGGGCCAGCCGGCCA TGGCGCACGTGCCGACGCTGGGCGCGGTTTCGGTGACCGGGCCGGGGCGCAGCAAAGAGCAGGAGGCCGAACCGGCTCAG GAGAAGGCGGCGCCGGGGCCGGTGCTGGCCGACAATCCTGCGCACCCTGACCACTCGACCTACCAGCAGATCCATTCCTG GGTGCGTGGCACGGGCAACTGGAACGTCGAAGAGAGCAAGAACGTCACCGCCTCGCTCTACAAGCAGCAAACCGAAGACC CGTTGCTGCAGCGGGTCGACAAGGTCACGGGCGGGCTGGGCAAAGACGGGGCGGAGAACGTCTTTGCGGTCTATGCGCCC TTTGGGGACAAAGGACCCTTTTTCCATGCCCATGTCGACGGGCGCGAGGCCTCGCAGGAGCCGGCCCAGCAGAACCTGCA GCAGGCGGAGGTCATTAAGCAGGACCAGACGCGACAGCAGGCGTTGGAAGAGACACAGCAGCAGACTGCACGGCAAGACC AGGCGCGACCAAGCCGGTCGCTGTAA
Upstream 100 bases:
>100_bases CAGCGGGGATTGGCACCGAAGGCCAGTCGGATGGCCTCTGGTTCTACGACGTAGTGAACCGTTGACGCGAGCCGCAAGCC AACAGGAAGGAGCCTGAGTC
Downstream 100 bases:
>100_bases GCGCTTCTGTCTGCGCTGGCCACAGTACTCGATCGCGGTCTCTGCTCTTCTCGCCAAGTAGATGGCCGTGGGTTAATGCT GTTGCAAAGGATCTTAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 861; Mature: 860
Protein sequence:
>861_residues MPNYRTLFQDHHNIEQQTLKNSELLAKLQETGRFDIHAPENRLFLPSDPQFAQALDITPHSGGPLGAYQDGVIERLDDLQ ATRDGRAALRGDPEALERVAQRVEQLRDTIKVGLINGDLNTNTPVGLSPSQASAKVQNFFRDTPGYHQAHAPQIDALKGF TGVDHGWGGVANSESRIVTALDQIQVSSTAIARGGNPTLQRSGLSVAIANAHHDGRVVLSEQGLLKVEQTLGEEAAQNLR VPRGQRGDVAMQLLMGEASARGLTRAGGLLTTGADAVMTARTASALMEQGNTTAAQSEVQHAIARNAGGWAGGASTAAAL GSSGGFVPAALVVGDAVLMSKAFDKGADLLDNRAIYHQTDKAGVEWQFNGRDWERQGAFERAADGRDTPSQAPVGASYAK SQELGAMANAKAAELALGKAPPPQDPFNLPAKPSDQTGLDNQNWQRNPATESWERQVKTGPAGANDRGVYEPQIASPEQT QRLNQEALGRIENNIATGREAIAQAYLESHAAQRGQDYGVAVPEAVESARAKPDQVQGHNGQLYQRNEAGQWAGKDGVAA GNLAVELELTNQMRQPSLERAQETLAAIEARPAPTPAQMEHNELLHRYRAAGVDLNAQENNLQAVELATQRTKHSEGLAG PTMQQLKPNEQGQYGYDSPIAHYQVDQDGVAHQVALTTAEELRQAKAELGQPAMAHVPTLGAVSVTGPGRSKEQEAEPAQ EKAAPGPVLADNPAHPDHSTYQQIHSWVRGTGNWNVEESKNVTASLYKQQTEDPLLQRVDKVTGGLGKDGAENVFAVYAP FGDKGPFFHAHVDGREASQEPAQQNLQQAEVIKQDQTRQQALEETQQQTARQDQARPSRSL
Sequences:
>Translated_861_residues MPNYRTLFQDHHNIEQQTLKNSELLAKLQETGRFDIHAPENRLFLPSDPQFAQALDITPHSGGPLGAYQDGVIERLDDLQ ATRDGRAALRGDPEALERVAQRVEQLRDTIKVGLINGDLNTNTPVGLSPSQASAKVQNFFRDTPGYHQAHAPQIDALKGF TGVDHGWGGVANSESRIVTALDQIQVSSTAIARGGNPTLQRSGLSVAIANAHHDGRVVLSEQGLLKVEQTLGEEAAQNLR VPRGQRGDVAMQLLMGEASARGLTRAGGLLTTGADAVMTARTASALMEQGNTTAAQSEVQHAIARNAGGWAGGASTAAAL GSSGGFVPAALVVGDAVLMSKAFDKGADLLDNRAIYHQTDKAGVEWQFNGRDWERQGAFERAADGRDTPSQAPVGASYAK SQELGAMANAKAAELALGKAPPPQDPFNLPAKPSDQTGLDNQNWQRNPATESWERQVKTGPAGANDRGVYEPQIASPEQT QRLNQEALGRIENNIATGREAIAQAYLESHAAQRGQDYGVAVPEAVESARAKPDQVQGHNGQLYQRNEAGQWAGKDGVAA GNLAVELELTNQMRQPSLERAQETLAAIEARPAPTPAQMEHNELLHRYRAAGVDLNAQENNLQAVELATQRTKHSEGLAG PTMQQLKPNEQGQYGYDSPIAHYQVDQDGVAHQVALTTAEELRQAKAELGQPAMAHVPTLGAVSVTGPGRSKEQEAEPAQ EKAAPGPVLADNPAHPDHSTYQQIHSWVRGTGNWNVEESKNVTASLYKQQTEDPLLQRVDKVTGGLGKDGAENVFAVYAP FGDKGPFFHAHVDGREASQEPAQQNLQQAEVIKQDQTRQQALEETQQQTARQDQARPSRSL >Mature_860_residues PNYRTLFQDHHNIEQQTLKNSELLAKLQETGRFDIHAPENRLFLPSDPQFAQALDITPHSGGPLGAYQDGVIERLDDLQA TRDGRAALRGDPEALERVAQRVEQLRDTIKVGLINGDLNTNTPVGLSPSQASAKVQNFFRDTPGYHQAHAPQIDALKGFT GVDHGWGGVANSESRIVTALDQIQVSSTAIARGGNPTLQRSGLSVAIANAHHDGRVVLSEQGLLKVEQTLGEEAAQNLRV PRGQRGDVAMQLLMGEASARGLTRAGGLLTTGADAVMTARTASALMEQGNTTAAQSEVQHAIARNAGGWAGGASTAAALG SSGGFVPAALVVGDAVLMSKAFDKGADLLDNRAIYHQTDKAGVEWQFNGRDWERQGAFERAADGRDTPSQAPVGASYAKS QELGAMANAKAAELALGKAPPPQDPFNLPAKPSDQTGLDNQNWQRNPATESWERQVKTGPAGANDRGVYEPQIASPEQTQ RLNQEALGRIENNIATGREAIAQAYLESHAAQRGQDYGVAVPEAVESARAKPDQVQGHNGQLYQRNEAGQWAGKDGVAAG NLAVELELTNQMRQPSLERAQETLAAIEARPAPTPAQMEHNELLHRYRAAGVDLNAQENNLQAVELATQRTKHSEGLAGP TMQQLKPNEQGQYGYDSPIAHYQVDQDGVAHQVALTTAEELRQAKAELGQPAMAHVPTLGAVSVTGPGRSKEQEAEPAQE KAAPGPVLADNPAHPDHSTYQQIHSWVRGTGNWNVEESKNVTASLYKQQTEDPLLQRVDKVTGGLGKDGAENVFAVYAPF GDKGPFFHAHVDGREASQEPAQQNLQQAEVIKQDQTRQQALEETQQQTARQDQARPSRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92447; Mature: 92316
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNYRTLFQDHHNIEQQTLKNSELLAKLQETGRFDIHAPENRLFLPSDPQFAQALDITPH CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEECCCCCCHHHEEECCCC SGGPLGAYQDGVIERLDDLQATRDGRAALRGDPEALERVAQRVEQLRDTIKVGLINGDLN CCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCC TNTPVGLSPSQASAKVQNFFRDTPGYHQAHAPQIDALKGFTGVDHGWGGVANSESRIVTA CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHH LDQIQVSSTAIARGGNPTLQRSGLSVAIANAHHDGRVVLSEQGLLKVEQTLGEEAAQNLR HHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCC VPRGQRGDVAMQLLMGEASARGLTRAGGLLTTGADAVMTARTASALMEQGNTTAAQSEVQ CCCCCCCHHHHHHHHHHHHHCCHHHCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHH HAIARNAGGWAGGASTAAALGSSGGFVPAALVVGDAVLMSKAFDKGADLLDNRAIYHQTD HHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC KAGVEWQFNGRDWERQGAFERAADGRDTPSQAPVGASYAKSQELGAMANAKAAELALGKA CCCCEEEECCCCHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCC PPPQDPFNLPAKPSDQTGLDNQNWQRNPATESWERQVKTGPAGANDRGVYEPQIASPEQT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH QRLNQEALGRIENNIATGREAIAQAYLESHAAQRGQDYGVAVPEAVESARAKPDQVQGHN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCC GQLYQRNEAGQWAGKDGVAAGNLAVELELTNQMRQPSLERAQETLAAIEARPAPTPAQME CCEEECCCCCCCCCCCCCEECCEEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCH HNELLHRYRAAGVDLNAQENNLQAVELATQRTKHSEGLAGPTMQQLKPNEQGQYGYDSPI HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCC AHYQVDQDGVAHQVALTTAEELRQAKAELGQPAMAHVPTLGAVSVTGPGRSKEQEAEPAQ CEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCHHHCCCHH EKAAPGPVLADNPAHPDHSTYQQIHSWVRGTGNWNVEESKNVTASLYKQQTEDPLLQRVD HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH KVTGGLGKDGAENVFAVYAPFGDKGPFFHAHVDGREASQEPAQQNLQQAEVIKQDQTRQQ HHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH ALEETQQQTARQDQARPSRSL HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PNYRTLFQDHHNIEQQTLKNSELLAKLQETGRFDIHAPENRLFLPSDPQFAQALDITPH CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEECCCCCCHHHEEECCCC SGGPLGAYQDGVIERLDDLQATRDGRAALRGDPEALERVAQRVEQLRDTIKVGLINGDLN CCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCC TNTPVGLSPSQASAKVQNFFRDTPGYHQAHAPQIDALKGFTGVDHGWGGVANSESRIVTA CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHH LDQIQVSSTAIARGGNPTLQRSGLSVAIANAHHDGRVVLSEQGLLKVEQTLGEEAAQNLR HHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCC VPRGQRGDVAMQLLMGEASARGLTRAGGLLTTGADAVMTARTASALMEQGNTTAAQSEVQ CCCCCCCHHHHHHHHHHHHHCCHHHCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHH HAIARNAGGWAGGASTAAALGSSGGFVPAALVVGDAVLMSKAFDKGADLLDNRAIYHQTD HHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC KAGVEWQFNGRDWERQGAFERAADGRDTPSQAPVGASYAKSQELGAMANAKAAELALGKA CCCCEEEECCCCHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCC PPPQDPFNLPAKPSDQTGLDNQNWQRNPATESWERQVKTGPAGANDRGVYEPQIASPEQT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH QRLNQEALGRIENNIATGREAIAQAYLESHAAQRGQDYGVAVPEAVESARAKPDQVQGHN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCC GQLYQRNEAGQWAGKDGVAAGNLAVELELTNQMRQPSLERAQETLAAIEARPAPTPAQME CCEEECCCCCCCCCCCCCEECCEEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCH HNELLHRYRAAGVDLNAQENNLQAVELATQRTKHSEGLAGPTMQQLKPNEQGQYGYDSPI HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCC AHYQVDQDGVAHQVALTTAEELRQAKAELGQPAMAHVPTLGAVSVTGPGRSKEQEAEPAQ CEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCHHHCCCHH EKAAPGPVLADNPAHPDHSTYQQIHSWVRGTGNWNVEESKNVTASLYKQQTEDPLLQRVD HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH KVTGGLGKDGAENVFAVYAPFGDKGPFFHAHVDGREASQEPAQQNLQQAEVIKQDQTRQQ HHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH ALEETQQQTARQDQARPSRSL HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA