| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243985
Identifier: 21243985
GI number: 21243985
Start: 3839400
End: 3840008
Strand: Direct
Name: 21243985
Synonym: XAC3259
Alternate gene names: NA
Gene position: 3839400-3840008 (Clockwise)
Preceding gene: 21243980
Following gene: 21243988
Centisome position: 74.18
GC content: 58.13
Gene sequence:
>609_bases ATGATACCCCGGTTGATACCTGATCATAGCGAGGCGACGACGGCGGCTCAAGAACATCCCGCAGGCTGGCCATGTCCCCG GCCAGCCATAAATGAATCCGGATGCCTGGCGTTGATATCACCTATCAACATACCTCAAATCAAACTTTTTTCGCGTATTC AAATTTGTGAAATGCAGCCGAAAGCGAGCTCTTGCTTAAGCGTCGGTTCTTGGTTGGATGAGGGCTCACCCAACACAGGA GCACCCATGCACCAAACACAGATTCAGGTCGCCAGTCGCTTGCTCGGCCACCTCCTTCAGCAGCGCACCACACGCCTTCC ACCTCATGAAGTGGAAGACATCCAATACGCGCTCGACTTGGCCGCCGAGCTGCTGAGGCTCGGCGGGCCAGGGCCAGCCA GTCAAACCCAGGCCTCAGCCATGGCACCTTCTCAACCCATCCTGGTCAAACGAGCGGCCGTTGATCGCAGCATCGTGCCG ACCATGCCGGCGTCCGTCGAAGAATGGCGGGAGATGCGCAAGAAGAACAAGGAAAAGGACAATGTCCCCCGCCCCAAGGA ACCCATCGGGATCGAGCGGATAGACCTCCGCCCTCGTCCCCGGCACTGA
Upstream 100 bases:
>100_bases CCAGAAGACGTGCCAGATGTGGAGCGGGCGATGGGAACAGAATCCTCCCACGCCAACCAATTGATTTTCCTAGCTTATCC CGGAGTGGGGTGATCCAAAA
Downstream 100 bases:
>100_bases GGGCCAAGAGAAAAAAGCCCCGCAGATGCGGGGCTTTCGATATCCATCAGGGCCGCGGGCGCCGGCTTGTTGGTCGTGGC GCTGGCGTCGGCATTGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MIPRLIPDHSEATTAAQEHPAGWPCPRPAINESGCLALISPINIPQIKLFSRIQICEMQPKASSCLSVGSWLDEGSPNTG APMHQTQIQVASRLLGHLLQQRTTRLPPHEVEDIQYALDLAAELLRLGGPGPASQTQASAMAPSQPILVKRAAVDRSIVP TMPASVEEWREMRKKNKEKDNVPRPKEPIGIERIDLRPRPRH
Sequences:
>Translated_202_residues MIPRLIPDHSEATTAAQEHPAGWPCPRPAINESGCLALISPINIPQIKLFSRIQICEMQPKASSCLSVGSWLDEGSPNTG APMHQTQIQVASRLLGHLLQQRTTRLPPHEVEDIQYALDLAAELLRLGGPGPASQTQASAMAPSQPILVKRAAVDRSIVP TMPASVEEWREMRKKNKEKDNVPRPKEPIGIERIDLRPRPRH >Mature_202_residues MIPRLIPDHSEATTAAQEHPAGWPCPRPAINESGCLALISPINIPQIKLFSRIQICEMQPKASSCLSVGSWLDEGSPNTG APMHQTQIQVASRLLGHLLQQRTTRLPPHEVEDIQYALDLAAELLRLGGPGPASQTQASAMAPSQPILVKRAAVDRSIVP TMPASVEEWREMRKKNKEKDNVPRPKEPIGIERIDLRPRPRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22291; Mature: 22291
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPRLIPDHSEATTAAQEHPAGWPCPRPAINESGCLALISPINIPQIKLFSRIQICEMQP CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC KASSCLSVGSWLDEGSPNTGAPMHQTQIQVASRLLGHLLQQRTTRLPPHEVEDIQYALDL CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AAELLRLGGPGPASQTQASAMAPSQPILVKRAAVDRSIVPTMPASVEEWREMRKKNKEKD HHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC NVPRPKEPIGIERIDLRPRPRH CCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MIPRLIPDHSEATTAAQEHPAGWPCPRPAINESGCLALISPINIPQIKLFSRIQICEMQP CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC KASSCLSVGSWLDEGSPNTGAPMHQTQIQVASRLLGHLLQQRTTRLPPHEVEDIQYALDL CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AAELLRLGGPGPASQTQASAMAPSQPILVKRAAVDRSIVPTMPASVEEWREMRKKNKEKD HHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC NVPRPKEPIGIERIDLRPRPRH CCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA