| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243981
Identifier: 21243981
GI number: 21243981
Start: 3836513
End: 3837052
Strand: Reverse
Name: 21243981
Synonym: XAC3255
Alternate gene names: NA
Gene position: 3837052-3836513 (Counterclockwise)
Preceding gene: 21243982
Following gene: 21243979
Centisome position: 74.14
GC content: 53.52
Gene sequence:
>540_bases TTGGCCTTCGATGTTTTGGTGAGTGGTTTGCGCAGCAGCGCCTTGCTTTGCGCTTGTCGTATTGCAAGACGCCTGGCTGA TTTTCCGTGGTCTGCGGAGTCCGGTTGGATTTTCAATGAATCTATCGTCGATAAATGGCTTGGATGTTTGCACGCTTTAA GTGTGGTTGGCCGCAGACTTGCTGATGTCTGGCTTTTGAGCGTGTACTGCAGCTGCACGGCTGAGGACCGCAAGTTGCAT GTTTTCAAACATCGCAGTCGATGCCGGTTTTTCAAGCAAGGCCACGCGCTCAGGAATTACGAAGAAAGTATTCGCCGTGT TTCTCGCAAAATCATGGAGAGGGCTGCGTACGAATTTCAGCTCCACATCCAGGTAGCAAGCAATGACGTGGCCTACCGTA AGAGGTCGCACAGATTCGCTCGGGCATTGCCATCCGCACCATCACCCTGGCCACGCGCAAGCCGCGTAGCGCACGCAGAA CCAATCCGCCATTCCATCGACCGAAACAAAAAACGCTTGCTGCCTACCCGATACCGGTAG
Upstream 100 bases:
>100_bases AGAGTGGAAAGCCAATCATCCGGATAAGCGCTTCCCGCTGTATCCGGGTTGAGTCGTTCGACAAGGGATATCGAGGGCCT GCAGTGGGTTAGGCGTTGCT
Downstream 100 bases:
>100_bases ACAGCAAGCGTCGCTCCTGAGTGCGCGTTGCTGGGACAGCTTTACTGGTCGCTCTTGCACTCGAAGACCGACACGCTACG CGGCGGGGCCAGGAATTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAFDVLVSGLRSSALLCACRIARRLADFPWSAESGWIFNESIVDKWLGCLHALSVVGRRLADVWLLSVYCSCTAEDRKLH VFKHRSRCRFFKQGHALRNYEESIRRVSRKIMERAAYEFQLHIQVASNDVAYRKRSHRFARALPSAPSPWPRASRVAHAE PIRHSIDRNKKRLLPTRYR
Sequences:
>Translated_179_residues MAFDVLVSGLRSSALLCACRIARRLADFPWSAESGWIFNESIVDKWLGCLHALSVVGRRLADVWLLSVYCSCTAEDRKLH VFKHRSRCRFFKQGHALRNYEESIRRVSRKIMERAAYEFQLHIQVASNDVAYRKRSHRFARALPSAPSPWPRASRVAHAE PIRHSIDRNKKRLLPTRYR >Mature_178_residues AFDVLVSGLRSSALLCACRIARRLADFPWSAESGWIFNESIVDKWLGCLHALSVVGRRLADVWLLSVYCSCTAEDRKLHV FKHRSRCRFFKQGHALRNYEESIRRVSRKIMERAAYEFQLHIQVASNDVAYRKRSHRFARALPSAPSPWPRASRVAHAEP IRHSIDRNKKRLLPTRYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20861; Mature: 20730
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDVLVSGLRSSALLCACRIARRLADFPWSAESGWIFNESIVDKWLGCLHALSVVGRRL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHH ADVWLLSVYCSCTAEDRKLHVFKHRSRCRFFKQGHALRNYEESIRRVSRKIMERAAYEFQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEE LHIQVASNDVAYRKRSHRFARALPSAPSPWPRASRVAHAEPIRHSIDRNKKRLLPTRYR EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure AFDVLVSGLRSSALLCACRIARRLADFPWSAESGWIFNESIVDKWLGCLHALSVVGRRL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHH ADVWLLSVYCSCTAEDRKLHVFKHRSRCRFFKQGHALRNYEESIRRVSRKIMERAAYEFQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEE LHIQVASNDVAYRKRSHRFARALPSAPSPWPRASRVAHAEPIRHSIDRNKKRLLPTRYR EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA