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The map label for this gene is rimK [H]

Identifier: 21243978

GI number: 21243978

Start: 3832959

End: 3833117

Strand: Reverse

Name: rimK [H]

Synonym: XAC3252

Alternate gene names: 21243978

Gene position: 3833117-3832959 (Counterclockwise)

Preceding gene: 21243979

Following gene: 21243977

Centisome position: 74.06

GC content: 67.92

Gene sequence:

>159_bases
GTGGCTGGGGTCGACCTGATCCGCTCAAGACGCGGCCCGCTGGTGCTGGAGGTCAACTCGACCCCAGGTCTGGAAGGGGT
GGAAGGCGTGTGCGGCGTGGATGTGGCCGCGGCGATTGTCGTGCACCTGGAACAGTCGGTCCGCCGATCGGCCGGCTAA

Upstream 100 bases:

>100_bases
TTCGGTCCAATCTGCACCTGGGCGGCACTGCCGCCGTGGCCGAGGCAACCGAACAGGAGCAGGAGGTGGCGGTGCGCTCG
GCACGCGCCTTGGCCTGGCA

Downstream 100 bases:

>100_bases
CGGTTTTACCGAAAAATTAACGAAAATCTAATTACGGCCCCGCTAGCCTCTTCCGACCGTAGCTCCGCTCTCGGCAGTGA
CGGTGATCGGGATGAACTTT

Product: ribosomal protein S6 modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 51

Protein sequence:

>52_residues
MAGVDLIRSRRGPLVLEVNSTPGLEGVEGVCGVDVAAAIVVHLEQSVRRSAG

Sequences:

>Translated_52_residues
MAGVDLIRSRRGPLVLEVNSTPGLEGVEGVCGVDVAAAIVVHLEQSVRRSAG
>Mature_51_residues
AGVDLIRSRRGPLVLEVNSTPGLEGVEGVCGVDVAAAIVVHLEQSVRRSAG

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG0189

COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR004666 [H]

Pfam domain/function: PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 5341; Mature: 5210

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVDLIRSRRGPLVLEVNSTPGLEGVEGVCGVDVAAAIVVHLEQSVRRSAG
CCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGVDLIRSRRGPLVLEVNSTPGLEGVEGVCGVDVAAAIVVHLEQSVRRSAG
CCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glu; Ribosomal protein S6 [C]

Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]

General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]