| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243960
Identifier: 21243960
GI number: 21243960
Start: 3809875
End: 3810390
Strand: Reverse
Name: 21243960
Synonym: XAC3234
Alternate gene names: NA
Gene position: 3810390-3809875 (Counterclockwise)
Preceding gene: 21243961
Following gene: 21243958
Centisome position: 73.62
GC content: 63.37
Gene sequence:
>516_bases ATGGTGACTAAGACCCCTTCGTCTCTTAAATGGCTAGTCGACAAGCGCGCCCGCCTCGCTGGCCACATTGCCCAGATCCA GAGAAGGGCCGACGCTGCTCGTCAGCTTGCGGCCGATCTGGACAGCAGCGTCGAGGCGACACGCAGGGATCTTGAAGCAC TGGACCGCATTCTTGGCCTTCACGACATCTGCGTGCCGCCGGAGGTTATCCGACCGGTACGAATGTCGAGTGAGGGTCCG CTGCTACAGCGCGGCCATATCAGCCGAAACGTCCTGGCCTGTCTGAGAGAGGCGGCGGGTGAATGGCGGTCTACGACTGA GGTCCTGCTGTTCGTCGGCTCGCAGGGCAAGGCGGTGGGCGGAAATGTGCAGTATGCGGAGCTCAGGCTGCGGGTACGCA AATGCCTGCAGGCTCACTGTTCCGCCGGAAGGGTCATCCGGCGGAACAGCCCGCGCACTAACGTAGAGGGTTACTGGGCA CTCGCGCCCGACGCCGATGACGGCGGGATGCCCTGA
Upstream 100 bases:
>100_bases CGCTGGTGAAGTAAGCACGCCCCACGCGCAAGTGTGTGAGCGCGCCATGAGGGCGCACTTGCCCAAGGAAATCCGGTAGC TGCTGGGATACGGTGGGGTC
Downstream 100 bases:
>100_bases TTCATTAGAATCTCAGTCCCGCGCCGTTTCCCCTGGTAGTAGCCGCGCCACCATCGCGAATGCCCCACGGTGAGGGCCTT TATCAGGAGCATTTCGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MVTKTPSSLKWLVDKRARLAGHIAQIQRRADAARQLAADLDSSVEATRRDLEALDRILGLHDICVPPEVIRPVRMSSEGP LLQRGHISRNVLACLREAAGEWRSTTEVLLFVGSQGKAVGGNVQYAELRLRVRKCLQAHCSAGRVIRRNSPRTNVEGYWA LAPDADDGGMP
Sequences:
>Translated_171_residues MVTKTPSSLKWLVDKRARLAGHIAQIQRRADAARQLAADLDSSVEATRRDLEALDRILGLHDICVPPEVIRPVRMSSEGP LLQRGHISRNVLACLREAAGEWRSTTEVLLFVGSQGKAVGGNVQYAELRLRVRKCLQAHCSAGRVIRRNSPRTNVEGYWA LAPDADDGGMP >Mature_171_residues MVTKTPSSLKWLVDKRARLAGHIAQIQRRADAARQLAADLDSSVEATRRDLEALDRILGLHDICVPPEVIRPVRMSSEGP LLQRGHISRNVLACLREAAGEWRSTTEVLLFVGSQGKAVGGNVQYAELRLRVRKCLQAHCSAGRVIRRNSPRTNVEGYWA LAPDADDGGMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18827; Mature: 18827
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTKTPSSLKWLVDKRARLAGHIAQIQRRADAARQLAADLDSSVEATRRDLEALDRILGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HDICVPPEVIRPVRMSSEGPLLQRGHISRNVLACLREAAGEWRSTTEVLLFVGSQGKAVG HHCCCCHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC GNVQYAELRLRVRKCLQAHCSAGRVIRRNSPRTNVEGYWALAPDADDGGMP CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MVTKTPSSLKWLVDKRARLAGHIAQIQRRADAARQLAADLDSSVEATRRDLEALDRILGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HDICVPPEVIRPVRMSSEGPLLQRGHISRNVLACLREAAGEWRSTTEVLLFVGSQGKAVG HHCCCCHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC GNVQYAELRLRVRKCLQAHCSAGRVIRRNSPRTNVEGYWALAPDADDGGMP CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA