| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243957
Identifier: 21243957
GI number: 21243957
Start: 3807382
End: 3808113
Strand: Reverse
Name: 21243957
Synonym: XAC3231
Alternate gene names: NA
Gene position: 3808113-3807382 (Counterclockwise)
Preceding gene: 21243958
Following gene: 21243954
Centisome position: 73.58
GC content: 60.25
Gene sequence:
>732_bases TTGCGCGGAAGGCTATGGCTCGATCACGCGCTATGGCTAAGCGGCCTGGAATGGACTCAATTCGAACGCATCTGCATCCA GCGAAACCGCTCGGCTTCCAAGCTCGGGGGCAAGTGGCGCGCGGGGACCAACTTGCCTAACCGTTCCTCGGCCCAGGCAA TGGAAAGAGTGCTATCGGGTACTGCCTGGGTATTCGATTTGGCCCTCTTTCAACTGCTGTCCAACGAGCCTCTGACGCGC TCACGCCTCACTGCCCTGACTGCGAATTTCAGGCAGCCTGGATTCTTGGATGGACACTGTTGGAGGCTACCGCACCAAGA TGGCGTGGCGATCTCCCACGACTCGCAAACGCTGCTCCATCGCGGGGATCTGTGGGGGCTGTTTGGCCTGGTCGGAGACG TTCGCTGGGCTGAGCTGGAGGGTGACGACTATAAGCACCTGGAATGCAGCCAGGACGCTTTCAGGGCACTTCCAGCTCTG CTTCGGACGCCCTGGGCTGCAGCGTGCGTTCCCCAGCTTTATGAGCTGCTGGAACGCGTTAGGCGGCGAGTTCCATATAC CCGGGACGCCTACGAGGTCGAGTGGAAGACGATCGAAGAGTTGGCGGCGCGCGCCCAATTTTCGGCGGAGCCAGCTGACC GCTCCAGTGATGCCAATGGGTATGCGGAGCTGTACCCCGATCCCATTGTTCTGATGAAGCGGGTGCGAGATCGTCGGATT CGACAATGGTGA
Upstream 100 bases:
>100_bases GCGAAAAACGCCCTAAACTTGACCCATGCGAAAGACCCTGGACGATCTTCTTCGGGAATGGAGCGGGCAACAGCCGGAGC GGAAAACGCCATGGCGAGCT
Downstream 100 bases:
>100_bases GCGCGTCAGGCGCGCGATCACTCTCCCGAGCAGGTACCAGTAGAATCCGCAATGTAGAAGGCCGGCAGGGATTCGTTTAA AAAACAGCCAAAAGTGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MRGRLWLDHALWLSGLEWTQFERICIQRNRSASKLGGKWRAGTNLPNRSSAQAMERVLSGTAWVFDLALFQLLSNEPLTR SRLTALTANFRQPGFLDGHCWRLPHQDGVAISHDSQTLLHRGDLWGLFGLVGDVRWAELEGDDYKHLECSQDAFRALPAL LRTPWAAACVPQLYELLERVRRRVPYTRDAYEVEWKTIEELAARAQFSAEPADRSSDANGYAELYPDPIVLMKRVRDRRI RQW
Sequences:
>Translated_243_residues MRGRLWLDHALWLSGLEWTQFERICIQRNRSASKLGGKWRAGTNLPNRSSAQAMERVLSGTAWVFDLALFQLLSNEPLTR SRLTALTANFRQPGFLDGHCWRLPHQDGVAISHDSQTLLHRGDLWGLFGLVGDVRWAELEGDDYKHLECSQDAFRALPAL LRTPWAAACVPQLYELLERVRRRVPYTRDAYEVEWKTIEELAARAQFSAEPADRSSDANGYAELYPDPIVLMKRVRDRRI RQW >Mature_243_residues MRGRLWLDHALWLSGLEWTQFERICIQRNRSASKLGGKWRAGTNLPNRSSAQAMERVLSGTAWVFDLALFQLLSNEPLTR SRLTALTANFRQPGFLDGHCWRLPHQDGVAISHDSQTLLHRGDLWGLFGLVGDVRWAELEGDDYKHLECSQDAFRALPAL LRTPWAAACVPQLYELLERVRRRVPYTRDAYEVEWKTIEELAARAQFSAEPADRSSDANGYAELYPDPIVLMKRVRDRRI RQW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28058; Mature: 28058
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRLWLDHALWLSGLEWTQFERICIQRNRSASKLGGKWRAGTNLPNRSSAQAMERVLSG CCCCEEHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCC TAWVFDLALFQLLSNEPLTRSRLTALTANFRQPGFLDGHCWRLPHQDGVAISHDSQTLLH HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEECCCHHHHH RGDLWGLFGLVGDVRWAELEGDDYKHLECSQDAFRALPALLRTPWAAACVPQLYELLERV CCCHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RRRVPYTRDAYEVEWKTIEELAARAQFSAEPADRSSDANGYAELYPDPIVLMKRVRDRRI HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH RQW CCC >Mature Secondary Structure MRGRLWLDHALWLSGLEWTQFERICIQRNRSASKLGGKWRAGTNLPNRSSAQAMERVLSG CCCCEEHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCC TAWVFDLALFQLLSNEPLTRSRLTALTANFRQPGFLDGHCWRLPHQDGVAISHDSQTLLH HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEECCCHHHHH RGDLWGLFGLVGDVRWAELEGDDYKHLECSQDAFRALPALLRTPWAAACVPQLYELLERV CCCHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RRRVPYTRDAYEVEWKTIEELAARAQFSAEPADRSSDANGYAELYPDPIVLMKRVRDRRI HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH RQW CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA