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The map label for this gene is orfS [H]

Identifier: 21243953

GI number: 21243953

Start: 3803395

End: 3804414

Strand: Reverse

Name: orfS [H]

Synonym: XAC3227

Alternate gene names: 21243953

Gene position: 3804414-3803395 (Counterclockwise)

Preceding gene: 21243954

Following gene: 21243952

Centisome position: 73.51

GC content: 67.06

Gene sequence:

>1020_bases
GTGCTCAAGGGCATCCAAACGGTGCATCCGAGTCAGGAAAAGCGAGCCACGCCACTACAGCTCACGCAGTTGGGTCAGGT
CGTGGATTGGCTCGATGGCGCCGCAACTGCGGCCGGAACGCGTGACGATGCGGCCGGTCGGCTCCGGCACCTGCGCGATC
GCGCCTTTGTACTGCTGGGCTTTTGGCGCGGTTTCCGCGGCGACGAACTGGTTCGCCTCCAGGTTCAGGATTTGGAGTTG
GTGGCCGGCGAAGGCATGACCTGCTTCCTGCCGCACAGCAAGAGCGATCGCCAGCACGCCGGCACCACCTACAAGGTCCC
GGCACTGTCGCGCTGGTGCCCGGTGGCTGCCACCATGACCTGGGTCGCGGCAGCCGCCCTCCACGAGGGGCCACTGTTTC
GCGCGGTCAACCAGTGGGGCGGGATTGCCGCCGCGCCACTCCACCCCAACAGCCTGGTGCATCTGCTACGGCGGATCTTC
CGTGAGGCGGGGCTGAGTTCTCCCAACGACTACAGCGGCCACTCGCTGCGGCGCGGCTTTGCCGGCTGGGCCAACGCCAA
CGGCTGGGATGTCAAGGCGCTGATGGAGTACGTCGGCTGGCGCGACGTGCAGTCGGCGATGCGCTACCTCGACGGGGCCG
ATCCGTTCGCCCGCCAGCGCATTGAGGCGAGCCTGCCGCCAGCCACACCACCGCTGCTGGCCCTGGCGGCGCCGGCTCCC
GATCCAGTGCCGACCACGGCGGTCGAAGCGACTGTCACCCTGACGCGCTTCAACTCGCGTGTGCGCGGACTGGCCAAAGC
GCATCGGCTGATCGAGCAAATCTGCCTGCAACCGCATCAGGCGCAGCGACTCAACACCGACGGCACGCGCTACCGGTTGG
CGATCGCGGCCGTTGACGAGGCTGCCTTTGAAGAAACCATCGCAATGCTGCTCGACGAGATGCACCGCATCGCCGACAAC
CACCAGTGCTTCCTCGCCGTCGCCTTGCGCGATGAAGCGGGCGAGCGCCATTGGGACTAA

Upstream 100 bases:

>100_bases
ACTCGCGCTCAACACACTCAGGCACCGGCTCGCAGCACTGGCCCAGTGACACCAGGCGCACGGTTTCGCCGACCCCACGC
GGGCGCCCGTCGTACGCAAG

Downstream 100 bases:

>100_bases
ACCTGAGCATGACGACGCTGCACGAAACCGCCTACCCGCGCCTCAAGCCCGATCCCACCGCCAAAGAGCTCCAGGATATC
TACACGCCTACTGCGGTGGA

Product: cointegrate resolution protein S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MLKGIQTVHPSQEKRATPLQLTQLGQVVDWLDGAATAAGTRDDAAGRLRHLRDRAFVLLGFWRGFRGDELVRLQVQDLEL
VAGEGMTCFLPHSKSDRQHAGTTYKVPALSRWCPVAATMTWVAAAALHEGPLFRAVNQWGGIAAAPLHPNSLVHLLRRIF
REAGLSSPNDYSGHSLRRGFAGWANANGWDVKALMEYVGWRDVQSAMRYLDGADPFARQRIEASLPPATPPLLALAAPAP
DPVPTTAVEATVTLTRFNSRVRGLAKAHRLIEQICLQPHQAQRLNTDGTRYRLAIAAVDEAAFEETIAMLLDEMHRIADN
HQCFLAVALRDEAGERHWD

Sequences:

>Translated_339_residues
MLKGIQTVHPSQEKRATPLQLTQLGQVVDWLDGAATAAGTRDDAAGRLRHLRDRAFVLLGFWRGFRGDELVRLQVQDLEL
VAGEGMTCFLPHSKSDRQHAGTTYKVPALSRWCPVAATMTWVAAAALHEGPLFRAVNQWGGIAAAPLHPNSLVHLLRRIF
REAGLSSPNDYSGHSLRRGFAGWANANGWDVKALMEYVGWRDVQSAMRYLDGADPFARQRIEASLPPATPPLLALAAPAP
DPVPTTAVEATVTLTRFNSRVRGLAKAHRLIEQICLQPHQAQRLNTDGTRYRLAIAAVDEAAFEETIAMLLDEMHRIADN
HQCFLAVALRDEAGERHWD
>Mature_339_residues
MLKGIQTVHPSQEKRATPLQLTQLGQVVDWLDGAATAAGTRDDAAGRLRHLRDRAFVLLGFWRGFRGDELVRLQVQDLEL
VAGEGMTCFLPHSKSDRQHAGTTYKVPALSRWCPVAATMTWVAAAALHEGPLFRAVNQWGGIAAAPLHPNSLVHLLRRIF
REAGLSSPNDYSGHSLRRGFAGWANANGWDVKALMEYVGWRDVQSAMRYLDGADPFARQRIEASLPPATPPLLALAAPAP
DPVPTTAVEATVTLTRFNSRVRGLAKAHRLIEQICLQPHQAQRLNTDGTRYRLAIAAVDEAAFEETIAMLLDEMHRIADN
HQCFLAVALRDEAGERHWD

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 37432; Mature: 37432

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGIQTVHPSQEKRATPLQLTQLGQVVDWLDGAATAAGTRDDAAGRLRHLRDRAFVLLG
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
FWRGFRGDELVRLQVQDLELVAGEGMTCFLPHSKSDRQHAGTTYKVPALSRWCPVAATMT
HHCCCCCCCEEEEEEECCCEEECCCCEEEECCCCCCHHHCCCEEECCCCHHHCHHHHHHH
WVAAAALHEGPLFRAVNQWGGIAAAPLHPNSLVHLLRRIFREAGLSSPNDYSGHSLRRGF
HHHHHHHHCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC
AGWANANGWDVKALMEYVGWRDVQSAMRYLDGADPFARQRIEASLPPATPPLLALAAPAP
CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEECCCC
DPVPTTAVEATVTLTRFNSRVRGLAKAHRLIEQICLQPHQAQRLNTDGTRYRLAIAAVDE
CCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEEEHHH
AAFEETIAMLLDEMHRIADNHQCFLAVALRDEAGERHWD
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MLKGIQTVHPSQEKRATPLQLTQLGQVVDWLDGAATAAGTRDDAAGRLRHLRDRAFVLLG
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
FWRGFRGDELVRLQVQDLELVAGEGMTCFLPHSKSDRQHAGTTYKVPALSRWCPVAATMT
HHCCCCCCCEEEEEEECCCEEECCCCEEEECCCCCCHHHCCCEEECCCCHHHCHHHHHHH
WVAAAALHEGPLFRAVNQWGGIAAAPLHPNSLVHLLRRIFREAGLSSPNDYSGHSLRRGF
HHHHHHHHCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC
AGWANANGWDVKALMEYVGWRDVQSAMRYLDGADPFARQRIEASLPPATPPLLALAAPAP
CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEECCCC
DPVPTTAVEATVTLTRFNSRVRGLAKAHRLIEQICLQPHQAQRLNTDGTRYRLAIAAVDE
CCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEEEHHH
AAFEETIAMLLDEMHRIADNHQCFLAVALRDEAGERHWD
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11073919 [H]