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The map label for this gene is ssuC [H]

Identifier: 21243923

GI number: 21243923

Start: 3762283

End: 3763077

Strand: Reverse

Name: ssuC [H]

Synonym: XAC3197

Alternate gene names: 21243923

Gene position: 3763077-3762283 (Counterclockwise)

Preceding gene: 21243924

Following gene: 21243922

Centisome position: 72.71

GC content: 65.91

Gene sequence:

>795_bases
ATGAGCGCCGCCTCGCGCCGCCTGGGCAACGCATTGTTGCCCTGGCTGCTGCCGCTGGGCTTGCTGGCGGGCTGGCAAAT
TGCAGCCTCCAGCGGTTGGTTGCCGCAGCGCATCCTGCCCGCGCCGGATGCGGTGCTGCGTGCGGCAGCCACGCTGGTGC
GCAGCGGCGAGTTGTGGCAACACCTGGCCATCAGCAGCTGGCGCGCGGCGGTCGGCCTGGCGATTGGCGGCAGTATCGGA
TTTGCGCTCGGCCTATTGACCGGCGTCTGCCGCGTGGCCGAGCGCCTGCTCGACAGCGCCCTGCAGATGCTGCGCAACGT
GCCGCATCTGGCGCTGATTCCGCTGGTGATCCTGTGGTTCGGTATCGATGAGGGCGCCAAACTGTTTCTGGTCGCCTTGG
GCACCTTTTTTCCGATCTATCTCAACACCTACCACGGCATCCGTAGCGTGGACCCGGCCTTGATCGAGATGGCGCGCAAC
TATGGCCTGCGCGGTCCGCAGCTGTTCCGGGACGTGCTGTTGCCAGGTGCGTTACCGTCGATTCTGGTGGGCTTGCGGTT
CGCGTTGGGCCTGATGTGGCTGACCCTGATCGTGGCCGAGACCATCTCTGCCAGTTCCGGCATCGGCTATCTGGCAACGA
ACGCGCGCGAATTCTTGCAGACCGATATCGTGGTGGTCGCCATCGTGCTGTACGCGCTGCTCGGCAAGCTGGCCGATCTG
GCCGCGCGCGGGCTGGAAGCCTGGTGGCTGGGCTGGCATCCGGCGCAACAACAGCGTGCAGAGCTACGCCGATGA

Upstream 100 bases:

>100_bases
GATGCAGGAGCCGCGGCCATGGCGCTGCGCGTGGCCGGGCCTGTGCAGCCGTTTCGATCCTACGCGACACGCTGCAGCGC
GCCACGACCGAGGTGTCGCG

Downstream 100 bases:

>100_bases
GCGCTGCCACCACCGGGCTGCCGCTGCGCGTACGCGGCATCGCGAAACGTTATGGCGACAGCGACGTGTTGCGCGGCATC
GACCTGGAGATCGCGCCCAG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSAASRRLGNALLPWLLPLGLLAGWQIAASSGWLPQRILPAPDAVLRAAATLVRSGELWQHLAISSWRAAVGLAIGGSIG
FALGLLTGVCRVAERLLDSALQMLRNVPHLALIPLVILWFGIDEGAKLFLVALGTFFPIYLNTYHGIRSVDPALIEMARN
YGLRGPQLFRDVLLPGALPSILVGLRFALGLMWLTLIVAETISASSGIGYLATNAREFLQTDIVVVAIVLYALLGKLADL
AARGLEAWWLGWHPAQQQRAELRR

Sequences:

>Translated_264_residues
MSAASRRLGNALLPWLLPLGLLAGWQIAASSGWLPQRILPAPDAVLRAAATLVRSGELWQHLAISSWRAAVGLAIGGSIG
FALGLLTGVCRVAERLLDSALQMLRNVPHLALIPLVILWFGIDEGAKLFLVALGTFFPIYLNTYHGIRSVDPALIEMARN
YGLRGPQLFRDVLLPGALPSILVGLRFALGLMWLTLIVAETISASSGIGYLATNAREFLQTDIVVVAIVLYALLGKLADL
AARGLEAWWLGWHPAQQQRAELRR
>Mature_263_residues
SAASRRLGNALLPWLLPLGLLAGWQIAASSGWLPQRILPAPDAVLRAAATLVRSGELWQHLAISSWRAAVGLAIGGSIGF
ALGLLTGVCRVAERLLDSALQMLRNVPHLALIPLVILWFGIDEGAKLFLVALGTFFPIYLNTYHGIRSVDPALIEMARNY
GLRGPQLFRDVLLPGALPSILVGLRFALGLMWLTLIVAETISASSGIGYLATNAREFLQTDIVVVAIVLYALLGKLADLA
ARGLEAWWLGWHPAQQQRAELRR

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=246, Percent_Identity=71.5447154471545, Blast_Score=328, Evalue=2e-91,
Organism=Escherichia coli, GI1786564, Length=238, Percent_Identity=36.1344537815126, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28577; Mature: 28446

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAASRRLGNALLPWLLPLGLLAGWQIAASSGWLPQRILPAPDAVLRAAATLVRSGELWQ
CCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HLAISSWRAAVGLAIGGSIGFALGLLTGVCRVAERLLDSALQMLRNVPHLALIPLVILWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GIDEGAKLFLVALGTFFPIYLNTYHGIRSVDPALIEMARNYGLRGPQLFRDVLLPGALPS
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
ILVGLRFALGLMWLTLIVAETISASSGIGYLATNAREFLQTDIVVVAIVLYALLGKLADL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARGLEAWWLGWHPAQQQRAELRR
HHHCCHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SAASRRLGNALLPWLLPLGLLAGWQIAASSGWLPQRILPAPDAVLRAAATLVRSGELWQ
CHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HLAISSWRAAVGLAIGGSIGFALGLLTGVCRVAERLLDSALQMLRNVPHLALIPLVILWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GIDEGAKLFLVALGTFFPIYLNTYHGIRSVDPALIEMARNYGLRGPQLFRDVLLPGALPS
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
ILVGLRFALGLMWLTLIVAETISASSGIGYLATNAREFLQTDIVVVAIVLYALLGKLADL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARGLEAWWLGWHPAQQQRAELRR
HHHCCHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]