| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fecA [H]
Identifier: 21243902
GI number: 21243902
Start: 3735276
End: 3737417
Strand: Direct
Name: fecA [H]
Synonym: XAC3176
Alternate gene names: 21243902
Gene position: 3735276-3737417 (Clockwise)
Preceding gene: 21243901
Following gene: 21243903
Centisome position: 72.17
GC content: 63.91
Gene sequence:
>2142_bases ATGTCGACGTTCCGTTTCCACGCCCTGGCCATCGCGATCGCGGCGAGCACGCTGACGCTGCCGCAGCTGACGCGCGCAAG CGATACGCCGACGACCGATGCGCTCGATGCGAGCGTTGGCGGTACGCCGATTCGCGCGCTGGATGCGATCCAGGTGCAGG GCAGCCTGCTCGGGCGCTCCAAACCCGACGATGTGCAGCGTTACGCCGGCAGCCGCCAGGTGATCGACCGCGAGCAGTTG CGCAATGGCGGCAACCGTTCGCTGGACGATGCTCTGCAACGCGTGCCGGGCATCAAGATCTTCGACGAAACCGGCACCGG CGCGCTGCCGCAGCTGATGCTGCGCGGCCTGTACGAAAGCCGCAGCGGTCGCGTGCAGGTGCTCGAAGACGGCATTCCAT TGGCGTTGGCCCCGTATGGGCAAACCAGCCTGTCGTTGTTCCCGGTGGGGTTGAACCAGATCGACCGCATCGACATCGTG CGTGGCGGTGCGGCCGTGCAATACGGACCGAACAACGTGGGCGGGGTGATCAACCTGGTCAGCAAGGAGATCCCGAGCGC GTGGAGCACCACGCTGGCGCACAAGGTCACCGCCGGCGGCGAGGGCCAGTTCCTGCAGGACAGTGCGCTCAGCAGCGGTG GATATCTCACCGATCATTTCGGGATGCAGATCGATGCCAATCGCACCTATGGCGAGTACTGGCGCGCGCATAGCGACACC GACATCAGCAATCTGCGCGTACGTGCCGAATGGTGGCTGGACGACACCAAGCTGCTCAAGGCCAGCGTGCAGCGGTATCT GGTCGACATGGATCTGGCCGGCGCGCTGAGCCCGGATGATTATCGGCGCGACCCGCGCCAGTCCACCCGCCCGCTGGACA GCTTCAACGGCCGCACCACACGTGCGTCGCTGAGCTACGAACAGCTGCTGGGCGATTGGGGACCGATGCAGGACGTGCGC CTGGATTGGAGCAACTTCAGTGCACGCAGCAGTCGCAATTTCATTGTCGGCATGCGCCAGGCCTCCACCGAGACGTGGCG CTCGGACTTGCCGCCGCAACTGCGCCAGACCGCACCGCGCGACTTCCGCGTGGTCGGCAGCGAGCCACGGCTGAGCTGGA GCATGGGCGATGCCGGTGGCGTGCGTCAGCAATGGACTGCCGGGGTGCGCGCAGTGCGCGAGGACATCGATTTTCTGGTG GGCAATCTGCGTCTGCGCGACGGGCTATTCACCACCGTGCGCGATTGGCAGTTCGAAGACCGTGCGTTGGCCGCATACAT CAGCAACGCCATCACCCTACCGGACGAGCGCGTGACGATCACGCCAGGCCTACGCTACGAGCGGCTGGATTCGCGTTATT TCAATCGCGCCACTGGCGTCAGCACGCTCAACCAAACGCGCGATGTCTTGCCCGGGCTGACGTTGGGCTTCCAGGCAACT GAGCAGTGGTTCTTCTACGCCGACGGGCAGCGCTCGATGCGCGCGCCGCAGGTCACACAGATCATCTTCGGCAACAACCT GGATGCCGAGCTGGCATGGAATTACGAGGCCGGCGCGCGCTATCAACCCAACGAGCGCACACGCATCCAGTTGGGTGGGT ATCTCATCGATTTCGACCAACAGATTCAACTCGACAACACCACGCGCGTGTTTCGCAACCTGGGCAGGACCCGCCATCAA GGTGGCGAGCTGGAACTGCAGTGGAGCCCTGAGCAACTGCGTGCGCTCACCCTCAACGCCAGTTATGCCTATCTGGATGC CAGCCAGGAATCGGGCGCATTCCGTGGCTTGCGCGTGCCTTACACCTCGCGCAACCAGATCACGCTGGGCGGCACGTACG CGCTCGGTCACACCACTGTCGCGCTTTCCGGCTATTACTTCAGCAAGGCCTTCAGCGACGCGGCCAACACCGTGCAAGAG AACGCCATCGCGTCGGTGGGTCAGTTGCCGGCCTACATGGTCTGGAACACGCAAGTGAGCCATACCTTGTTCGAACGCGA TGGACAGAAGTTCAGTGCATCGTTGGCGATCAACAACCTGTTCGACCGGCACTACTGGTTCCGTGGCGTGGACACCAGCC CCTGGGGGCGTCAGGCCGCGCCTGCGCGCACCGTCACTGCCGGACTGGAGTACACGTTTTAA
Upstream 100 bases:
>100_bases GGCCGGCGAAGACCGCGCGCTGATCCAACGCGCCTTGCGCGGCCATTTGGCCAGCCTTGCCGTCCCCCATTCACCTCCCG CCTGCAGGAGCACGCCGTAG
Downstream 100 bases:
>100_bases ACCTGCATCACGTAGCTAGCGCTGCACACGACCAATGCACAGGCGTAGGTTGCGCGTGAAGCGACGGCGGTCGTACTGAC GAGCGCCAAGACAACACGGC
Product: citrate-dependent iron transporter
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 713; Mature: 712
Protein sequence:
>713_residues MSTFRFHALAIAIAASTLTLPQLTRASDTPTTDALDASVGGTPIRALDAIQVQGSLLGRSKPDDVQRYAGSRQVIDREQL RNGGNRSLDDALQRVPGIKIFDETGTGALPQLMLRGLYESRSGRVQVLEDGIPLALAPYGQTSLSLFPVGLNQIDRIDIV RGGAAVQYGPNNVGGVINLVSKEIPSAWSTTLAHKVTAGGEGQFLQDSALSSGGYLTDHFGMQIDANRTYGEYWRAHSDT DISNLRVRAEWWLDDTKLLKASVQRYLVDMDLAGALSPDDYRRDPRQSTRPLDSFNGRTTRASLSYEQLLGDWGPMQDVR LDWSNFSARSSRNFIVGMRQASTETWRSDLPPQLRQTAPRDFRVVGSEPRLSWSMGDAGGVRQQWTAGVRAVREDIDFLV GNLRLRDGLFTTVRDWQFEDRALAAYISNAITLPDERVTITPGLRYERLDSRYFNRATGVSTLNQTRDVLPGLTLGFQAT EQWFFYADGQRSMRAPQVTQIIFGNNLDAELAWNYEAGARYQPNERTRIQLGGYLIDFDQQIQLDNTTRVFRNLGRTRHQ GGELELQWSPEQLRALTLNASYAYLDASQESGAFRGLRVPYTSRNQITLGGTYALGHTTVALSGYYFSKAFSDAANTVQE NAIASVGQLPAYMVWNTQVSHTLFERDGQKFSASLAINNLFDRHYWFRGVDTSPWGRQAAPARTVTAGLEYTF
Sequences:
>Translated_713_residues MSTFRFHALAIAIAASTLTLPQLTRASDTPTTDALDASVGGTPIRALDAIQVQGSLLGRSKPDDVQRYAGSRQVIDREQL RNGGNRSLDDALQRVPGIKIFDETGTGALPQLMLRGLYESRSGRVQVLEDGIPLALAPYGQTSLSLFPVGLNQIDRIDIV RGGAAVQYGPNNVGGVINLVSKEIPSAWSTTLAHKVTAGGEGQFLQDSALSSGGYLTDHFGMQIDANRTYGEYWRAHSDT DISNLRVRAEWWLDDTKLLKASVQRYLVDMDLAGALSPDDYRRDPRQSTRPLDSFNGRTTRASLSYEQLLGDWGPMQDVR LDWSNFSARSSRNFIVGMRQASTETWRSDLPPQLRQTAPRDFRVVGSEPRLSWSMGDAGGVRQQWTAGVRAVREDIDFLV GNLRLRDGLFTTVRDWQFEDRALAAYISNAITLPDERVTITPGLRYERLDSRYFNRATGVSTLNQTRDVLPGLTLGFQAT EQWFFYADGQRSMRAPQVTQIIFGNNLDAELAWNYEAGARYQPNERTRIQLGGYLIDFDQQIQLDNTTRVFRNLGRTRHQ GGELELQWSPEQLRALTLNASYAYLDASQESGAFRGLRVPYTSRNQITLGGTYALGHTTVALSGYYFSKAFSDAANTVQE NAIASVGQLPAYMVWNTQVSHTLFERDGQKFSASLAINNLFDRHYWFRGVDTSPWGRQAAPARTVTAGLEYTF >Mature_712_residues STFRFHALAIAIAASTLTLPQLTRASDTPTTDALDASVGGTPIRALDAIQVQGSLLGRSKPDDVQRYAGSRQVIDREQLR NGGNRSLDDALQRVPGIKIFDETGTGALPQLMLRGLYESRSGRVQVLEDGIPLALAPYGQTSLSLFPVGLNQIDRIDIVR GGAAVQYGPNNVGGVINLVSKEIPSAWSTTLAHKVTAGGEGQFLQDSALSSGGYLTDHFGMQIDANRTYGEYWRAHSDTD ISNLRVRAEWWLDDTKLLKASVQRYLVDMDLAGALSPDDYRRDPRQSTRPLDSFNGRTTRASLSYEQLLGDWGPMQDVRL DWSNFSARSSRNFIVGMRQASTETWRSDLPPQLRQTAPRDFRVVGSEPRLSWSMGDAGGVRQQWTAGVRAVREDIDFLVG NLRLRDGLFTTVRDWQFEDRALAAYISNAITLPDERVTITPGLRYERLDSRYFNRATGVSTLNQTRDVLPGLTLGFQATE QWFFYADGQRSMRAPQVTQIIFGNNLDAELAWNYEAGARYQPNERTRIQLGGYLIDFDQQIQLDNTTRVFRNLGRTRHQG GELELQWSPEQLRALTLNASYAYLDASQESGAFRGLRVPYTSRNQITLGGTYALGHTTVALSGYYFSKAFSDAANTVQEN AIASVGQLPAYMVWNTQVSHTLFERDGQKFSASLAINNLFDRHYWFRGVDTSPWGRQAAPARTVTAGLEYTF
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=690, Percent_Identity=32.463768115942, Blast_Score=298, Evalue=9e-82, Organism=Escherichia coli, GI1790405, Length=127, Percent_Identity=34.6456692913386, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79443; Mature: 79311
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFRFHALAIAIAASTLTLPQLTRASDTPTTDALDASVGGTPIRALDAIQVQGSLLGRS CCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHEEEHHHHCCCC KPDDVQRYAGSRQVIDREQLRNGGNRSLDDALQRVPGIKIFDETGTGALPQLMLRGLYES CCHHHHHHCCCHHHCCHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHC RSGRVQVLEDGIPLALAPYGQTSLSLFPVGLNQIDRIDIVRGGAAVQYGPNNVGGVINLV CCCCEEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCHHHHHH SKEIPSAWSTTLAHKVTAGGEGQFLQDSALSSGGYLTDHFGMQIDANRTYGEYWRAHSDT HHHCCCHHHHHHHHEECCCCCCCEECHHHCCCCCEEEECCCEEEECCCCHHHHHCCCCCC DISNLRVRAEWWLDDTKLLKASVQRYLVDMDLAGALSPDDYRRDPRQSTRPLDSFNGRTT CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHCCCCHHCCCCCE RASLSYEQLLGDWGPMQDVRLDWSNFSARSSRNFIVGMRQASTETWRSDLPPQLRQTAPR EECCCHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEHHCCCHHHHHCCCHHHHHCCCC DFRVVGSEPRLSWSMGDAGGVRQQWTAGVRAVREDIDFLVGNLRLRDGLFTTVRDWQFED CEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCEEHHHCCCCCH RALAAYISNAITLPDERVTITPGLRYERLDSRYFNRATGVSTLNQTRDVLPGLTLGFQAT HHHHHHHHCCEECCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCEEC EQWFFYADGQRSMRAPQVTQIIFGNNLDAELAWNYEAGARYQPNERTRIQLGGYLIDFDQ CCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEECCEEEECCC QIQLDNTTRVFRNLGRTRHQGGELELQWSPEQLRALTLNASYAYLDASQESGAFRGLRVP EEEECHHHHHHHHHHHHHCCCCEEEEEECHHHEEEEEEECCEEEEECCCCCCCCCEEECC YTSRNQITLGGTYALGHTTVALSGYYFSKAFSDAANTVQENAIASVGQLPAYMVWNTQVS CCCCCEEEECCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH HTLFERDGQKFSASLAINNLFDRHYWFRGVDTSPWGRQAAPARTVTAGLEYTF HHHHHCCCCEEEEEHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEECCCEECC >Mature Secondary Structure STFRFHALAIAIAASTLTLPQLTRASDTPTTDALDASVGGTPIRALDAIQVQGSLLGRS CCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHEEEHHHHCCCC KPDDVQRYAGSRQVIDREQLRNGGNRSLDDALQRVPGIKIFDETGTGALPQLMLRGLYES CCHHHHHHCCCHHHCCHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHC RSGRVQVLEDGIPLALAPYGQTSLSLFPVGLNQIDRIDIVRGGAAVQYGPNNVGGVINLV CCCCEEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCHHHHHH SKEIPSAWSTTLAHKVTAGGEGQFLQDSALSSGGYLTDHFGMQIDANRTYGEYWRAHSDT HHHCCCHHHHHHHHEECCCCCCCEECHHHCCCCCEEEECCCEEEECCCCHHHHHCCCCCC DISNLRVRAEWWLDDTKLLKASVQRYLVDMDLAGALSPDDYRRDPRQSTRPLDSFNGRTT CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHCCCCHHCCCCCE RASLSYEQLLGDWGPMQDVRLDWSNFSARSSRNFIVGMRQASTETWRSDLPPQLRQTAPR EECCCHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEHHCCCHHHHHCCCHHHHHCCCC DFRVVGSEPRLSWSMGDAGGVRQQWTAGVRAVREDIDFLVGNLRLRDGLFTTVRDWQFED CEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCEEHHHCCCCCH RALAAYISNAITLPDERVTITPGLRYERLDSRYFNRATGVSTLNQTRDVLPGLTLGFQAT HHHHHHHHCCEECCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCEEC EQWFFYADGQRSMRAPQVTQIIFGNNLDAELAWNYEAGARYQPNERTRIQLGGYLIDFDQ CCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEECCEEEECCC QIQLDNTTRVFRNLGRTRHQGGELELQWSPEQLRALTLNASYAYLDASQESGAFRGLRVP EEEECHHHHHHHHHHHHHCCCCEEEEEECHHHEEEEEEECCEEEEECCCCCCCCCEEECC YTSRNQITLGGTYALGHTTVALSGYYFSKAFSDAANTVQENAIASVGQLPAYMVWNTQVS CCCCCEEEECCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH HTLFERDGQKFSASLAINNLFDRHYWFRGVDTSPWGRQAAPARTVTAGLEYTF HHHHHCCCCEEEEEHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]