| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is bioI [H]
Identifier: 21243896
GI number: 21243896
Start: 3728207
End: 3729400
Strand: Reverse
Name: bioI [H]
Synonym: XAC3170
Alternate gene names: 21243896
Gene position: 3729400-3728207 (Counterclockwise)
Preceding gene: 21243898
Following gene: 21243891
Centisome position: 72.06
GC content: 65.49
Gene sequence:
>1194_bases ATGCTTCTCAGCGATTTGGCAACACCCCAGTTCCGCCACGATCCCTATCCGACCTACGCACGCCTGCGCGAAGAAGGCCC ACTGGTGCAGGTGGCGGACGGGCGGCTGATGTCCGGCCGCTACGCCGTGGTCGATCGCCTGCTCAGCGACCGACGGGTCG GCCGCGACTATCTGCAGAGCGTTCGTCTGCGCTACGGCGAGGCGGCGGTGCACCTGCCGCTGTTCCAGGGCATGAGCCGC ATGTTCCTGCTGCTCAATCCGCCGCTGCACACGCAGTTGCGCGGACTGATGACGCAGGCCTTCGGTGCGCGGCAGATGGA GTCCATGCGTGAGGTAGCCAGCGATATCGCCGCCGGGTTGATCGACGCTTTCCAGGCCAACGGCCACTGCGATCTGCTGA CCGAGTTCGCGTTCCCGCTGCCGATCGCCATCATCTGCCGGATGCTGGATATCGCTGCAGCCGATGTCACCGCGCTGAGT CACGCGACCAGCGCGCTGGCGAAAGTCTTCGATCCGATGATGACGGCGGAAGAACTGCAGGCCACCAGCGTTGCGTACGA CCAGCTGGCAACATATTTCCACGGCGTGATCGCGCAACGTCGCAGCGCTGGTGGCGATGATCTGATCGCGCGCTTCATCC AGGCCGAGGATAACGGCCGCCGCCTGAGCGAGGAGGAGATCGTCTCCAACGTGATCCTGCTGTTCTTTGCCGGTCACGAA ACCACCTCCAACATGATCTGCAATGCGCTGGTCGCGCTGCATCGGCATCCGCAGCAATTGCGCCTGCTGCAGGAAACCCC GGGCCTGCTGCCCAATGCAGTGCTCGAATGCATGCGCTACGACAGCTCGGTGCAGATGGCCACGCGCACCGCCTTGCAGG ATTTCGAGATCGAGGGCGTGGCGGTTCCCCGGGGCACCATGCTGTATCTGATGCTGGGCGCGGCCAATCACGACACGCTG CAGTTCACCGACCCGCAGGTGCTGGATATCCGCCGCCAGCAGGGCCGCGCGCTGTCGCTCGGTGGCGGCATCCACCACTG CCTGGGCAACCGGCTGGCCCTGATCGAAGTGGAAGCCGCGCTGGCCTGCCTGCTTGCGCGTCTGCCGGCGCTTCGGCTGG AGCAGCTGGACACGCTGAGCTGGAACGACCGCGCCAACCTGCGCGGTGTCGACGCGCTGCTGGCCTCCTGGTGA
Upstream 100 bases:
>100_bases CGTGCAGATAATCCGGGCATCCCGTAGAGCACCTGCGTCCTTCGGCAGGTGCACGCATGCATCGCCCCCATTTCGGCGGT GATGCCACATGAGCCAGGCC
Downstream 100 bases:
>100_bases GCTGCGGCCAGGCGGTGCAGCGACGTGACGTGCCGGGATGGAATCGCAGCGGCAATCACCGCGCCGGCAATCGCCGTGGC AGATGAGGCACGGCCGCGGC
Product: cytochrome P-450 hydroxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MLLSDLATPQFRHDPYPTYARLREEGPLVQVADGRLMSGRYAVVDRLLSDRRVGRDYLQSVRLRYGEAAVHLPLFQGMSR MFLLLNPPLHTQLRGLMTQAFGARQMESMREVASDIAAGLIDAFQANGHCDLLTEFAFPLPIAIICRMLDIAAADVTALS HATSALAKVFDPMMTAEELQATSVAYDQLATYFHGVIAQRRSAGGDDLIARFIQAEDNGRRLSEEEIVSNVILLFFAGHE TTSNMICNALVALHRHPQQLRLLQETPGLLPNAVLECMRYDSSVQMATRTALQDFEIEGVAVPRGTMLYLMLGAANHDTL QFTDPQVLDIRRQQGRALSLGGGIHHCLGNRLALIEVEAALACLLARLPALRLEQLDTLSWNDRANLRGVDALLASW
Sequences:
>Translated_397_residues MLLSDLATPQFRHDPYPTYARLREEGPLVQVADGRLMSGRYAVVDRLLSDRRVGRDYLQSVRLRYGEAAVHLPLFQGMSR MFLLLNPPLHTQLRGLMTQAFGARQMESMREVASDIAAGLIDAFQANGHCDLLTEFAFPLPIAIICRMLDIAAADVTALS HATSALAKVFDPMMTAEELQATSVAYDQLATYFHGVIAQRRSAGGDDLIARFIQAEDNGRRLSEEEIVSNVILLFFAGHE TTSNMICNALVALHRHPQQLRLLQETPGLLPNAVLECMRYDSSVQMATRTALQDFEIEGVAVPRGTMLYLMLGAANHDTL QFTDPQVLDIRRQQGRALSLGGGIHHCLGNRLALIEVEAALACLLARLPALRLEQLDTLSWNDRANLRGVDALLASW >Mature_397_residues MLLSDLATPQFRHDPYPTYARLREEGPLVQVADGRLMSGRYAVVDRLLSDRRVGRDYLQSVRLRYGEAAVHLPLFQGMSR MFLLLNPPLHTQLRGLMTQAFGARQMESMREVASDIAAGLIDAFQANGHCDLLTEFAFPLPIAIICRMLDIAAADVTALS HATSALAKVFDPMMTAEELQATSVAYDQLATYFHGVIAQRRSAGGDDLIARFIQAEDNGRRLSEEEIVSNVILLFFAGHE TTSNMICNALVALHRHPQQLRLLQETPGLLPNAVLECMRYDSSVQMATRTALQDFEIEGVAVPRGTMLYLMLGAANHDTL QFTDPQVLDIRRQQGRALSLGGGIHHCLGNRLALIEVEAALACLLARLPALRLEQLDTLSWNDRANLRGVDALLASW
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI4503231, Length=180, Percent_Identity=29.4444444444444, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI16933533, Length=171, Percent_Identity=28.0701754385965, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24642101, Length=189, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 43942; Mature: 43942
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSDLATPQFRHDPYPTYARLREEGPLVQVADGRLMSGRYAVVDRLLSDRRVGRDYLQS CCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCEECCHHHHHHHHHHHHHCCHHHHHH VRLRYGEAAVHLPLFQGMSRMFLLLNPPLHTQLRGLMTQAFGARQMESMREVASDIAAGL HHHHHCCHHEEHHHHHCHHHEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH IDAFQANGHCDLLTEFAFPLPIAIICRMLDIAAADVTALSHATSALAKVFDPMMTAEELQ HHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATSVAYDQLATYFHGVIAQRRSAGGDDLIARFIQAEDNGRRLSEEEIVSNVILLFFAGHE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECCC TTSNMICNALVALHRHPQQLRLLQETPGLLPNAVLECMRYDSSVQMATRTALQDFEIEGV CHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEE AVPRGTMLYLMLGAANHDTLQFTDPQVLDIRRQQGRALSLGGGIHHCLGNRLALIEVEAA ECCCCEEEEEEEECCCCCCEEECCCHHHHHHHHCCCEEEECCHHHHHHCCCEEEEEHHHH LACLLARLPALRLEQLDTLSWNDRANLRGVDALLASW HHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MLLSDLATPQFRHDPYPTYARLREEGPLVQVADGRLMSGRYAVVDRLLSDRRVGRDYLQS CCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCEECCHHHHHHHHHHHHHCCHHHHHH VRLRYGEAAVHLPLFQGMSRMFLLLNPPLHTQLRGLMTQAFGARQMESMREVASDIAAGL HHHHHCCHHEEHHHHHCHHHEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH IDAFQANGHCDLLTEFAFPLPIAIICRMLDIAAADVTALSHATSALAKVFDPMMTAEELQ HHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATSVAYDQLATYFHGVIAQRRSAGGDDLIARFIQAEDNGRRLSEEEIVSNVILLFFAGHE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECCC TTSNMICNALVALHRHPQQLRLLQETPGLLPNAVLECMRYDSSVQMATRTALQDFEIEGV CHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEE AVPRGTMLYLMLGAANHDTLQFTDPQVLDIRRQQGRALSLGGGIHHCLGNRLALIEVEAA ECCCCEEEEEEEECCCCCCEEECCCHHHHHHHHCCCEEEECCHHHHHHCCCEEEEEHHHH LACLLARLPALRLEQLDTLSWNDRANLRGVDALLASW HHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]