| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243890
Identifier: 21243890
GI number: 21243890
Start: 3716568
End: 3717068
Strand: Reverse
Name: 21243890
Synonym: XAC3164
Alternate gene names: NA
Gene position: 3717068-3716568 (Counterclockwise)
Preceding gene: 21243891
Following gene: 21243888
Centisome position: 71.82
GC content: 63.27
Gene sequence:
>501_bases ATGATCACCGCCACCATCAGCCTGGAAGACCATCTGGCCGCACAGCGCTTGCGTGCGCGTCATTGGTCCAAACGTGTGAT CGTGTTTCTGGCTGTTCTGCTGCTGGTCGGGGTGGTGGTGCTGCAACTGAGTGACGCGAGCGAGATCATCGGCCCGGTGC TGATCGGCAGCGGTGGCGGCGGGTTGATCGGCCTGGCGCTGTTGCACGTGTGGGGCCTGCCACGGCGGATCAAACGCCTG CACGCGCAGCAGGCCTCGCTGCGGCATACCTACACCTATGCATGGGACGAGAACGGACTGGAAATCACCTGGGCGGACGG CCATCTGCGTCGCCCCTGGTCCGATTACATGCGCATCCGCGAAAACGAGCGGGTGCTGCTGCTGTACCACAACGACCGGC TGTTCGAGCTGTTCTGCCCGCATTGGTTCGCCGACAGGGCGCAGTACGAGGCGTTTCGTCAGTTGGCCGTGCAGGTGGGA AAGACGTCCAAAGCGCCCTAA
Upstream 100 bases:
>100_bases CGCACGGTTCGTACCCGCCTGCCGATTGCGCTACCTGTCGTTAGTCACGACAAAAACCGCTGGGTTACGCTGCGCCTGGA GCCCAGCAAGGAGGTTGCCC
Downstream 100 bases:
>100_bases GCGCGGCAGTGCTGCTCAGCTGCTGATGTGCTGTTCTGCCAGTAGCCAATCGCGCAACCGGCGCCCGGCGTCGCTTTGCG GCCGCGACCGTAGCCGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MITATISLEDHLAAQRLRARHWSKRVIVFLAVLLLVGVVVLQLSDASEIIGPVLIGSGGGGLIGLALLHVWGLPRRIKRL HAQQASLRHTYTYAWDENGLEITWADGHLRRPWSDYMRIRENERVLLLYHNDRLFELFCPHWFADRAQYEAFRQLAVQVG KTSKAP
Sequences:
>Translated_166_residues MITATISLEDHLAAQRLRARHWSKRVIVFLAVLLLVGVVVLQLSDASEIIGPVLIGSGGGGLIGLALLHVWGLPRRIKRL HAQQASLRHTYTYAWDENGLEITWADGHLRRPWSDYMRIRENERVLLLYHNDRLFELFCPHWFADRAQYEAFRQLAVQVG KTSKAP >Mature_166_residues MITATISLEDHLAAQRLRARHWSKRVIVFLAVLLLVGVVVLQLSDASEIIGPVLIGSGGGGLIGLALLHVWGLPRRIKRL HAQQASLRHTYTYAWDENGLEITWADGHLRRPWSDYMRIRENERVLLLYHNDRLFELFCPHWFADRAQYEAFRQLAVQVG KTSKAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19000; Mature: 19000
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITATISLEDHLAAQRLRARHWSKRVIVFLAVLLLVGVVVLQLSDASEIIGPVLIGSGGG CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCEEEECCCCC GLIGLALLHVWGLPRRIKRLHAQQASLRHTYTYAWDENGLEITWADGHLRRPWSDYMRIR HHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEECCCCCCCCHHHHHHHC ENERVLLLYHNDRLFELFCPHWFADRAQYEAFRQLAVQVGKTSKAP CCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MITATISLEDHLAAQRLRARHWSKRVIVFLAVLLLVGVVVLQLSDASEIIGPVLIGSGGG CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCEEEECCCCC GLIGLALLHVWGLPRRIKRLHAQQASLRHTYTYAWDENGLEITWADGHLRRPWSDYMRIR HHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEECCCCCCCCHHHHHHHC ENERVLLLYHNDRLFELFCPHWFADRAQYEAFRQLAVQVGKTSKAP CCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA