| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fhuA [C]
Identifier: 21243884
GI number: 21243884
Start: 3709161
End: 3711572
Strand: Direct
Name: fhuA [C]
Synonym: XAC3158
Alternate gene names: 21243884
Gene position: 3709161-3711572 (Clockwise)
Preceding gene: 21243883
Following gene: 21243885
Centisome position: 71.67
GC content: 65.01
Gene sequence:
>2412_bases ATGGATTCGATGTCCTCCTTGCGCGTGCGCCATCCTGCCACGCTCGCGTTATTGCTGGTTCCGCTCACCCTGCCCGCATA CGCACAGCAGGTTCCCGACGGCGCAACCCCCGACCCGGCCGCAACCGTACCGGCCAGCGCTGACGAGCAAGTATCGACGC TGGATCAGGTGCAGGTGGTCGGCCAAGCGATGACCTATTCCAAGACCAACGTCAGCAAGGAAATGCTGGACCGCCAGTTC GTGCTCGGCAGCGTCAACGATGCGCTCAACGAACTGCCCGGCGTGGTGGTCACCGAAGCCGATGCCTTCGGCTCGTCGGA TTGGGGCACGCAGATCAGCATGCGCGGCTTCGTCAGCAATCGCGATACGCAGCAGATCGGCACCACCATCGACGGCGTGC CCAATGGTGGCTCTGCGTACGGCGGTGGCTCCAAGGCCAACCGCTTCATCGACATGCCGGATCTGGAAACGGTGGAAGTG AGCCAGGGCACCGCCGACATCGCCTCGCGCTCCAACGAAGCCCTGGGCGGCACCTTGAATTACCTCACCAGCGAACCGCT GGAAACGCAGCGTGTGCGCATGATCGGCGGCATTGGCGATAACCAGGCGCGCAAATACTACGCGCGCTACGACACCGGCC TGATCGGCGGCAGCACACGCGCCTGGGTCAGCGGCTCGTCGGCACGCAACGACGACTGGATCGACGGCAGCGGCCACACC AGCCGCGATCACCTGGCCGGCAAGTTCGTCAGCGTGTTGAATCAGTGGACGCTCAGCGGCTACGCCTCTTACGACGATGC CGACGAATCCGAATACGCCAGCGTGACCCCGGAGCAATTCGCGCGCGCCCCCGAGCACGACCTGTTGACCGGCACGCTCA CCGGCATTCCGTACCTGGACCAGAACTACCGCTCCGGCTCGCGTGCGCTGCGCAAGAACACCTTTGGCTACCTGCGCGGC GCCTTCGATGGCGGCAACGGCTTCAAGACCACGCTGACCGGCTATGCCCACCGCATGCAGGGGCGCGGCGACTGGATTCC GCCGTATCTGGTGGATGTCAGCAACGATGGCGCCGGCATGGCGGAATCCGAGGCGCGTGGCGGCAATACCGTGTATGGCG GCAGCGATCTGGGCAAGCTGTATTACCTCACCCCCGGCGGCGCAGCTGCCACCATGCTGGCCGGTTGTGCCGGCAGCGAT GCGGTACCGGCCGAATCCAATCCGGCCTGCTATCCGGCCGGTTCGGTGCCGGTGCAGTCGTATCGACATAGCCACTACGA CAATCACCGCGCCGGCGCGATCGCCGATGTGGAATGGCGGACCGATCTCGGCGCCATCGACAACACCGCGCGTGCCGGTG CCTGGCTGGAGCGCGTTGAGCGCAGCGTCACCCGCGACTGGCACCGCCTGCTCAACGTCGGCACCAACATCAGCTTCGAT CATCAGCCGTATTGGGTGCAGTTCAAGGACAACTACCAGACCGACGAGCAGATGTATTACCTGGAAGACGTGATGCGCTA TGGCGCATTCGCCTGGCGCGTGGGCGTCAAGCAATTCTTCGTCGACCAGACCCGCGACCGCCGCATCGGCGATGCGCAGC ACGTGCAATCGGATTCGCATTCGGACCCGTTGCTGTCGGCCGGCCTGACCTGGACGACACCGGTGCAGGGCCTGGAAGCC TTTGCCGGCTACTCGCAAAACTTCGCCGCGATTCCGTCCGGCGTGCTGGGCGAAACCGACCCGGTCGCGCTGAGCCGGGT GAAACCGGAAACCGCCGACAACATCGAACTCGGCCTGCGTGTCAGCCGCTGGCCGTTGACCGGCAGCGTCACGCTGTACG ACATCCGCTTCGACAACCGCATCGTGTATGTGCCGGCCAACTTCGTCACCGGTATCGATTACCTGGGCGAAACCGATGGC GTGTACGAAAACTTCGGCGGCGTGCATGCGCGCGGCGTGGAAGCAGCGCTGGGCTACGGCTGGGACAACGGCTGGCGCAT CAATGGCGCCTACACCTACAACAAGGCCGATTACCTGGGCAGCGGCGACGCCGCACGCGATACCGCGCTGGAAATCACCC CCGGCGCGCAGGTGATCGGCCAACCGCGCAACACCCTGGTGGTGTCGGCGGACTGGCGCGGCCAGGCGTGGCGCTTCGGT ATGTCCGGACGCTATCTGGGCAAGCGCTACCTGGATGCCTCCAACCGCGCCGCACTCGATGGCGTGACAACCTTCGATGC GAACCTCGGGGTGGAACTATCGCAGCTGTCGTCGCAGCTCAAGGGCCTGCAGCTGGCGCTCAACGTCAGCAACCTCACCG ACAAACGCTATCTGGAGGGCGTGGACGGCAGCGACAGCGCCTTTATCGCCGCGCCGCGCACGGTCGGGCTGACGTTGACG CTGGATCTCTAG
Upstream 100 bases:
>100_bases AAGTCCATCTGGTGATCCCGGCCACACCTATAGCGCGGTCATCATCACGCAACGCAAGCGCGGCAGTCTTCCCAGACCCC CTCCCCCGCTGTGGATTTCA
Downstream 100 bases:
>100_bases CGTCGGCGGCGCATTGCCGACCTGCGGGATGGCCATTGCGACATGCGTGCGAGCGGATCGGGCTGAAGACACGCCACCCG ATCCGCTCCCTGCATCGCCT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Protein; Nb-Dependent Receptor; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Receptor Plug; NB Dependent Receptor Protein; Iron Transporter
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MDSMSSLRVRHPATLALLLVPLTLPAYAQQVPDGATPDPAATVPASADEQVSTLDQVQVVGQAMTYSKTNVSKEMLDRQF VLGSVNDALNELPGVVVTEADAFGSSDWGTQISMRGFVSNRDTQQIGTTIDGVPNGGSAYGGGSKANRFIDMPDLETVEV SQGTADIASRSNEALGGTLNYLTSEPLETQRVRMIGGIGDNQARKYYARYDTGLIGGSTRAWVSGSSARNDDWIDGSGHT SRDHLAGKFVSVLNQWTLSGYASYDDADESEYASVTPEQFARAPEHDLLTGTLTGIPYLDQNYRSGSRALRKNTFGYLRG AFDGGNGFKTTLTGYAHRMQGRGDWIPPYLVDVSNDGAGMAESEARGGNTVYGGSDLGKLYYLTPGGAAATMLAGCAGSD AVPAESNPACYPAGSVPVQSYRHSHYDNHRAGAIADVEWRTDLGAIDNTARAGAWLERVERSVTRDWHRLLNVGTNISFD HQPYWVQFKDNYQTDEQMYYLEDVMRYGAFAWRVGVKQFFVDQTRDRRIGDAQHVQSDSHSDPLLSAGLTWTTPVQGLEA FAGYSQNFAAIPSGVLGETDPVALSRVKPETADNIELGLRVSRWPLTGSVTLYDIRFDNRIVYVPANFVTGIDYLGETDG VYENFGGVHARGVEAALGYGWDNGWRINGAYTYNKADYLGSGDAARDTALEITPGAQVIGQPRNTLVVSADWRGQAWRFG MSGRYLGKRYLDASNRAALDGVTTFDANLGVELSQLSSQLKGLQLALNVSNLTDKRYLEGVDGSDSAFIAAPRTVGLTLT LDL
Sequences:
>Translated_803_residues MDSMSSLRVRHPATLALLLVPLTLPAYAQQVPDGATPDPAATVPASADEQVSTLDQVQVVGQAMTYSKTNVSKEMLDRQF VLGSVNDALNELPGVVVTEADAFGSSDWGTQISMRGFVSNRDTQQIGTTIDGVPNGGSAYGGGSKANRFIDMPDLETVEV SQGTADIASRSNEALGGTLNYLTSEPLETQRVRMIGGIGDNQARKYYARYDTGLIGGSTRAWVSGSSARNDDWIDGSGHT SRDHLAGKFVSVLNQWTLSGYASYDDADESEYASVTPEQFARAPEHDLLTGTLTGIPYLDQNYRSGSRALRKNTFGYLRG AFDGGNGFKTTLTGYAHRMQGRGDWIPPYLVDVSNDGAGMAESEARGGNTVYGGSDLGKLYYLTPGGAAATMLAGCAGSD AVPAESNPACYPAGSVPVQSYRHSHYDNHRAGAIADVEWRTDLGAIDNTARAGAWLERVERSVTRDWHRLLNVGTNISFD HQPYWVQFKDNYQTDEQMYYLEDVMRYGAFAWRVGVKQFFVDQTRDRRIGDAQHVQSDSHSDPLLSAGLTWTTPVQGLEA FAGYSQNFAAIPSGVLGETDPVALSRVKPETADNIELGLRVSRWPLTGSVTLYDIRFDNRIVYVPANFVTGIDYLGETDG VYENFGGVHARGVEAALGYGWDNGWRINGAYTYNKADYLGSGDAARDTALEITPGAQVIGQPRNTLVVSADWRGQAWRFG MSGRYLGKRYLDASNRAALDGVTTFDANLGVELSQLSSQLKGLQLALNVSNLTDKRYLEGVDGSDSAFIAAPRTVGLTLT LDL >Mature_803_residues MDSMSSLRVRHPATLALLLVPLTLPAYAQQVPDGATPDPAATVPASADEQVSTLDQVQVVGQAMTYSKTNVSKEMLDRQF VLGSVNDALNELPGVVVTEADAFGSSDWGTQISMRGFVSNRDTQQIGTTIDGVPNGGSAYGGGSKANRFIDMPDLETVEV SQGTADIASRSNEALGGTLNYLTSEPLETQRVRMIGGIGDNQARKYYARYDTGLIGGSTRAWVSGSSARNDDWIDGSGHT SRDHLAGKFVSVLNQWTLSGYASYDDADESEYASVTPEQFARAPEHDLLTGTLTGIPYLDQNYRSGSRALRKNTFGYLRG AFDGGNGFKTTLTGYAHRMQGRGDWIPPYLVDVSNDGAGMAESEARGGNTVYGGSDLGKLYYLTPGGAAATMLAGCAGSD AVPAESNPACYPAGSVPVQSYRHSHYDNHRAGAIADVEWRTDLGAIDNTARAGAWLERVERSVTRDWHRLLNVGTNISFD HQPYWVQFKDNYQTDEQMYYLEDVMRYGAFAWRVGVKQFFVDQTRDRRIGDAQHVQSDSHSDPLLSAGLTWTTPVQGLEA FAGYSQNFAAIPSGVLGETDPVALSRVKPETADNIELGLRVSRWPLTGSVTLYDIRFDNRIVYVPANFVTGIDYLGETDG VYENFGGVHARGVEAALGYGWDNGWRINGAYTYNKADYLGSGDAARDTALEITPGAQVIGQPRNTLVVSADWRGQAWRFG MSGRYLGKRYLDASNRAALDGVTTFDANLGVELSQLSSQLKGLQLALNVSNLTDKRYLEGVDGSDSAFIAAPRTVGLTLT LDL
Specific function: This Receptor Binds The Ferrichrome-Iron Ligand. It Interacts With The Tonb Protein, Which Is Responsible For Energy Coupling Of The Ferrichrome-Promoted Iron Transport System. Acts As A Receptor For Bacteriophage T5 As Well As T1, Phi80 And Colicin M. B
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86855; Mature: 86855
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSMSSLRVRHPATLALLLVPLTLPAYAQQVPDGATPDPAATVPASADEQVSTLDQVQVV CCCCCCCEECCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GQAMTYSKTNVSKEMLDRQFVLGSVNDALNELPGVVVTEADAFGSSDWGTQISMRGFVSN HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCC RDTQQIGTTIDGVPNGGSAYGGGSKANRFIDMPDLETVEVSQGTADIASRSNEALGGTLN CCHHHHCCEECCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCHHHHHCCCCCCCCCHH YLTSEPLETQRVRMIGGIGDNQARKYYARYDTGLIGGSTRAWVSGSSARNDDWIDGSGHT HHCCCCCCHHHEEEECCCCCHHHHHHHHHHCCCEECCCCEEEECCCCCCCCCCCCCCCCC SRDHLAGKFVSVLNQWTLSGYASYDDADESEYASVTPEQFARAPEHDLLTGTLTGIPYLD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCC QNYRSGSRALRKNTFGYLRGAFDGGNGFKTTLTGYAHRMQGRGDWIPPYLVDVSNDGAGM CCCCCHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCCCCC AESEARGGNTVYGGSDLGKLYYLTPGGAAATMLAGCAGSDAVPAESNPACYPAGSVPVQS CCCCCCCCCEEECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH YRHSHYDNHRAGAIADVEWRTDLGAIDNTARAGAWLERVERSVTRDWHRLLNVGTNISFD HHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC HQPYWVQFKDNYQTDEQMYYLEDVMRYGAFAWRVGVKQFFVDQTRDRRIGDAQHVQSDSH CCCEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC SDPLLSAGLTWTTPVQGLEAFAGYSQNFAAIPSGVLGETDPVALSRVKPETADNIELGLR CCCHHHCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEE VSRWPLTGSVTLYDIRFDNRIVYVPANFVTGIDYLGETDGVYENFGGVHARGVEAALGYG EEECCCCCCEEEEEEEECCEEEEECCHHHHHHHHCCCCCCHHHHCCCCEECCCHHHEECC WDNGWRINGAYTYNKADYLGSGDAARDTALEITPGAQVIGQPRNTLVVSADWRGQAWRFG CCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHCCCCCEEEEEECCCCCEEEEC MSGRYLGKRYLDASNRAALDGVTTFDANLGVELSQLSSQLKGLQLALNVSNLTDKRYLEG CCCCHHHHHHCCCCCCEEECCEEEECCCCCEEHHHHHHHHCCEEEEEEECCCCCHHHHCC VDGSDSAFIAAPRTVGLTLTLDL CCCCCCEEEECCCEEEEEEEEEC >Mature Secondary Structure MDSMSSLRVRHPATLALLLVPLTLPAYAQQVPDGATPDPAATVPASADEQVSTLDQVQVV CCCCCCCEECCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GQAMTYSKTNVSKEMLDRQFVLGSVNDALNELPGVVVTEADAFGSSDWGTQISMRGFVSN HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCC RDTQQIGTTIDGVPNGGSAYGGGSKANRFIDMPDLETVEVSQGTADIASRSNEALGGTLN CCHHHHCCEECCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCHHHHHCCCCCCCCCHH YLTSEPLETQRVRMIGGIGDNQARKYYARYDTGLIGGSTRAWVSGSSARNDDWIDGSGHT HHCCCCCCHHHEEEECCCCCHHHHHHHHHHCCCEECCCCEEEECCCCCCCCCCCCCCCCC SRDHLAGKFVSVLNQWTLSGYASYDDADESEYASVTPEQFARAPEHDLLTGTLTGIPYLD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCC QNYRSGSRALRKNTFGYLRGAFDGGNGFKTTLTGYAHRMQGRGDWIPPYLVDVSNDGAGM CCCCCHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCCCCC AESEARGGNTVYGGSDLGKLYYLTPGGAAATMLAGCAGSDAVPAESNPACYPAGSVPVQS CCCCCCCCCEEECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH YRHSHYDNHRAGAIADVEWRTDLGAIDNTARAGAWLERVERSVTRDWHRLLNVGTNISFD HHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC HQPYWVQFKDNYQTDEQMYYLEDVMRYGAFAWRVGVKQFFVDQTRDRRIGDAQHVQSDSH CCCEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC SDPLLSAGLTWTTPVQGLEAFAGYSQNFAAIPSGVLGETDPVALSRVKPETADNIELGLR CCCHHHCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEE VSRWPLTGSVTLYDIRFDNRIVYVPANFVTGIDYLGETDGVYENFGGVHARGVEAALGYG EEECCCCCCEEEEEEEECCEEEEECCHHHHHHHHCCCCCCHHHHCCCCEECCCHHHEECC WDNGWRINGAYTYNKADYLGSGDAARDTALEITPGAQVIGQPRNTLVVSADWRGQAWRFG CCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHCCCCCEEEEEECCCCCEEEEC MSGRYLGKRYLDASNRAALDGVTTFDANLGVELSQLSSQLKGLQLALNVSNLTDKRYLEG CCCCHHHHHHCCCCCCEEECCEEEECCCCCEEHHHHHHHHCCEEEEEEECCCCCHHHHCC VDGSDSAFIAAPRTVGLTLTLDL CCCCCCEEEECCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA