| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243823
Identifier: 21243823
GI number: 21243823
Start: 3633409
End: 3633885
Strand: Reverse
Name: 21243823
Synonym: XAC3096
Alternate gene names: NA
Gene position: 3633885-3633409 (Counterclockwise)
Preceding gene: 21243824
Following gene: 21243822
Centisome position: 70.21
GC content: 67.3
Gene sequence:
>477_bases ATGAGCTACGCCAATAACGACGAAATCCGCGGCGTCCTGATCCAGGCCGGTAGCGAGCGCGTGCTGCTGCCGAACGCGAC GGTGGCCGAGGTGATGTCGCGTGTGGCGGTCGAGCCGCTGCCCGACATGCCGCGCTGGGTGGTCGGACGCATCGACTGGT ACGGCTGGAAGGTGCCGCTGCTGTCGTTCGCGCGCCTCAGCGGCATGGGCGAAGAGCCCACCGCAGTCAACAACAAGGTC ATCGTGTTGAAGGCGTTGGGCGGCAACCCGGCGTTGCCGTATTTCGCGCTGCTGACGGCCTCGTTCCCGCAGCTGATTTC GGTGCCGCGCGATGGCCTGCTGGCCGATGCCTCGGAAGATGCGCTGCCCGACGGTGTGCACATGCGCGTGTTGCTGGGCG AGCAAAGCGCCCTGTTGCCGAACCTGGACGCCATCGAAGCGCAGGTCGGCCAGGCGCTTGCGGTCGCTGCCGCCTGA
Upstream 100 bases:
>100_bases GCAAGGCATTCTGACCGGCGACCCTGCGCAGTTGGCGCAGGCGCTGGCACAGCGTTGGCCGGCATAAGCCGGGCGCTCCC TTTCGAATCGGAATCATGCG
Downstream 100 bases:
>100_bases GAGCGGGCGGCACACCTGCTGTGCTCGCTGCCAGGCGGGTGCAGTCGCCTCGCGCAGTGGATGGCGCCGTGCTCTGAATG ATGCGCAGTGAGGGTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Chemotaxis-Related Protein; CheW-Like Domain-Containing Protein; Chemotaxis Protein; Chemotaxis CheW Protein
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSYANNDEIRGVLIQAGSERVLLPNATVAEVMSRVAVEPLPDMPRWVVGRIDWYGWKVPLLSFARLSGMGEEPTAVNNKV IVLKALGGNPALPYFALLTASFPQLISVPRDGLLADASEDALPDGVHMRVLLGEQSALLPNLDAIEAQVGQALAVAAA
Sequences:
>Translated_158_residues MSYANNDEIRGVLIQAGSERVLLPNATVAEVMSRVAVEPLPDMPRWVVGRIDWYGWKVPLLSFARLSGMGEEPTAVNNKV IVLKALGGNPALPYFALLTASFPQLISVPRDGLLADASEDALPDGVHMRVLLGEQSALLPNLDAIEAQVGQALAVAAA >Mature_157_residues SYANNDEIRGVLIQAGSERVLLPNATVAEVMSRVAVEPLPDMPRWVVGRIDWYGWKVPLLSFARLSGMGEEPTAVNNKVI VLKALGGNPALPYFALLTASFPQLISVPRDGLLADASEDALPDGVHMRVLLGEQSALLPNLDAIEAQVGQALAVAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16812; Mature: 16680
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYANNDEIRGVLIQAGSERVLLPNATVAEVMSRVAVEPLPDMPRWVVGRIDWYGWKVPL CCCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHH LSFARLSGMGEEPTAVNNKVIVLKALGGNPALPYFALLTASFPQLISVPRDGLLADASED HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCEECCCCC ALPDGVHMRVLLGEQSALLPNLDAIEAQVGQALAVAAA CCCCCCEEEEEECCCCCCCCCCHHHHHHHCCEEEEECC >Mature Secondary Structure SYANNDEIRGVLIQAGSERVLLPNATVAEVMSRVAVEPLPDMPRWVVGRIDWYGWKVPL CCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHH LSFARLSGMGEEPTAVNNKVIVLKALGGNPALPYFALLTASFPQLISVPRDGLLADASED HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCEECCCCC ALPDGVHMRVLLGEQSALLPNLDAIEAQVGQALAVAAA CCCCCCEEEEEECCCCCCCCCCHHHHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA