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The map label for this gene is yaaH [H]

Identifier: 21243800

GI number: 21243800

Start: 3597245

End: 3598300

Strand: Direct

Name: yaaH [H]

Synonym: XAC3073

Alternate gene names: 21243800

Gene position: 3597245-3598300 (Clockwise)

Preceding gene: 21243799

Following gene: 21243801

Centisome position: 69.5

GC content: 60.23

Gene sequence:

>1056_bases
ATGAGTAAGCGATTGACCTGGATGTTGCTCGCGCTGGCACTGACCTGCGCCCCGGCCTTGGCCAAAAACCCCACGGCGTT
GTTCTATCTGATGAACACGCAGAAATCGACCAACTCCTTCATCGCCAACGTCGACAAGATCGATGTGGTGGTGCCTACCT
GGTATGGCGTGGACCAGAACGGCCTGGTCAACGGCACCCCCAACATGTATCTGTACGACATCGCCAAGCAGCACAAGCTG
CGGGTCATGCCGATCCTGTCGATGACCACCGGTCGCGAAGGCTTCCACAAGCTGATGCATGACGAAACCGCCAAGAAGCG
CATGATCGAATCGCTGCTCATCCACGGCAAGCAGCACAAGTACTACGGCTTCCAGTTCGATTTCGAAAACATCGCCTGGA
CCGACCGCGACGCCTACACGCTGATGGTCAAGCAGACCGCAGACGCGCTGCACAAGGCCGGTTTCAAGATGTCGGTCGCC
GTGGTGCCGAACGCACCGGGCTATGCCGAAGGCGGCCAGTTCTCCAAGTGGATGTGGGAATACTGGCGCGGTGCGTACGA
CCTCAAAGCCCTGGGCCAGGCGGTGGATCTGGTCAGCCTGATGACCTACGACCAGCACACGCGCTGGACCACGCCGGGCC
CGGTCGATGGCATGGTGTGGATGAAGAAGCACCTGGATTACGCCATCACCCAGGTGCCGAAGGACAAGCTGTCGCTGGGC
ATCGCCACCTACGGCTATCGCTGGTACACCGGCAACCCGGTGAAGGACGACGGCACCGAGGCGTCGAATATTTCCGCAAC
GTATATCGATGCAGACGAGTCGTTCCCGCTGGCGCAGGAACAGAACGCCACCGTGCAGTGGGATCCGGTCGAGCAGGAAT
CATGGTTCTACTTCTATCGCGACGACATGCGCGAGTGGGTGTTCCGCCCTGACGCACGCAGCTTCAAGGCACGTTACGAG
CTGACCAGACAATACGGCCTGGAAGGATTCAGCTGCTGGGTGCTGGGCGCCGAAGACCCGAAGGTGTGGGACGAGCTACC
GACCGCGCAGCGCTAA

Upstream 100 bases:

>100_bases
CGGCCTGCATCTGCACCTGCCGGTCAAGCCGGTTGGCGAGAGTGCCTACGTCTTCCGCATCGACCTTTCCTCCCCCACTC
CCTGACGGATGTTGTCTTTC

Downstream 100 bases:

>100_bases
GCGCAGCTGACGCAACGACGGCACCGTGATCGGGCGGGCGCGGCTGGTGCAGGGAATCGGACTGCCTGGCTGCATTCCGG
TTCCAGCGTCGCCCGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSKRLTWMLLALALTCAPALAKNPTALFYLMNTQKSTNSFIANVDKIDVVVPTWYGVDQNGLVNGTPNMYLYDIAKQHKL
RVMPILSMTTGREGFHKLMHDETAKKRMIESLLIHGKQHKYYGFQFDFENIAWTDRDAYTLMVKQTADALHKAGFKMSVA
VVPNAPGYAEGGQFSKWMWEYWRGAYDLKALGQAVDLVSLMTYDQHTRWTTPGPVDGMVWMKKHLDYAITQVPKDKLSLG
IATYGYRWYTGNPVKDDGTEASNISATYIDADESFPLAQEQNATVQWDPVEQESWFYFYRDDMREWVFRPDARSFKARYE
LTRQYGLEGFSCWVLGAEDPKVWDELPTAQR

Sequences:

>Translated_351_residues
MSKRLTWMLLALALTCAPALAKNPTALFYLMNTQKSTNSFIANVDKIDVVVPTWYGVDQNGLVNGTPNMYLYDIAKQHKL
RVMPILSMTTGREGFHKLMHDETAKKRMIESLLIHGKQHKYYGFQFDFENIAWTDRDAYTLMVKQTADALHKAGFKMSVA
VVPNAPGYAEGGQFSKWMWEYWRGAYDLKALGQAVDLVSLMTYDQHTRWTTPGPVDGMVWMKKHLDYAITQVPKDKLSLG
IATYGYRWYTGNPVKDDGTEASNISATYIDADESFPLAQEQNATVQWDPVEQESWFYFYRDDMREWVFRPDARSFKARYE
LTRQYGLEGFSCWVLGAEDPKVWDELPTAQR
>Mature_350_residues
SKRLTWMLLALALTCAPALAKNPTALFYLMNTQKSTNSFIANVDKIDVVVPTWYGVDQNGLVNGTPNMYLYDIAKQHKLR
VMPILSMTTGREGFHKLMHDETAKKRMIESLLIHGKQHKYYGFQFDFENIAWTDRDAYTLMVKQTADALHKAGFKMSVAV
VPNAPGYAEGGQFSKWMWEYWRGAYDLKALGQAVDLVSLMTYDQHTRWTTPGPVDGMVWMKKHLDYAITQVPKDKLSLGI
ATYGYRWYTGNPVKDDGTEASNISATYIDADESFPLAQEQNATVQWDPVEQESWFYFYRDDMREWVFRPDARSFKARYEL
TRQYGLEGFSCWVLGAEDPKVWDELPTAQR

Specific function: May be required for the L-alanine-stimulated germination pathway [H]

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Spore wall (Probable). Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF00704 Glyco_hydro_18; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 40427; Mature: 40296

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRLTWMLLALALTCAPALAKNPTALFYLMNTQKSTNSFIANVDKIDVVVPTWYGVDQN
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHCCCCEEEEEEEEEECCCCC
GLVNGTPNMYLYDIAKQHKLRVMPILSMTTGREGFHKLMHDETAKKRMIESLLIHGKQHK
CEECCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YYGFQFDFENIAWTDRDAYTLMVKQTADALHKAGFKMSVAVVPNAPGYAEGGQFSKWMWE
EEEEEEECCCCEECCCCEEEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHH
YWRGAYDLKALGQAVDLVSLMTYDQHTRWTTPGPVDGMVWMKKHLDYAITQVPKDKLSLG
HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHEE
IATYGYRWYTGNPVKDDGTEASNISATYIDADESFPLAQEQNATVQWDPVEQESWFYFYR
EEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEH
DDMREWVFRPDARSFKARYELTRQYGLEGFSCWVLGAEDPKVWDELPTAQR
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCCC
>Mature Secondary Structure 
SKRLTWMLLALALTCAPALAKNPTALFYLMNTQKSTNSFIANVDKIDVVVPTWYGVDQN
CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHCCCCEEEEEEEEEECCCCC
GLVNGTPNMYLYDIAKQHKLRVMPILSMTTGREGFHKLMHDETAKKRMIESLLIHGKQHK
CEECCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YYGFQFDFENIAWTDRDAYTLMVKQTADALHKAGFKMSVAVVPNAPGYAEGGQFSKWMWE
EEEEEEECCCCEECCCCEEEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHH
YWRGAYDLKALGQAVDLVSLMTYDQHTRWTTPGPVDGMVWMKKHLDYAITQVPKDKLSLG
HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHEE
IATYGYRWYTGNPVKDDGTEASNISATYIDADESFPLAQEQNATVQWDPVEQESWFYFYR
EEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEH
DDMREWVFRPDARSFKARYELTRQYGLEGFSCWVLGAEDPKVWDELPTAQR
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 10419957 [H]