| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243786
Identifier: 21243786
GI number: 21243786
Start: 3581837
End: 3582436
Strand: Reverse
Name: 21243786
Synonym: XAC3059
Alternate gene names: NA
Gene position: 3582436-3581837 (Counterclockwise)
Preceding gene: 21243787
Following gene: 21243785
Centisome position: 69.22
GC content: 57.5
Gene sequence:
>600_bases TTGCGCATTTCTGCTCATGCGACGTCGGAAGTGCAGCCGTTGGATAAAAAATTTTCAGCTGGCGGACAGGCGGCAAGCCA TGCCGTCGCATCGGCTTCGCTGCCGTGCGGACGAAGTGTTCGGGCAGGCGTGCAAGCGCACGACTTAAAAAAAACAGCGG AAAAGAAGTGCTTTTTCGAAAACGCTGTTGGGCGAGCGCGCTTCTCGGTTGGACGGGTACGCCCGCGCGCGGGGCGATTC GCTGGCGCGGACATGGCGCGCAGCGACGGTGGGTGGAAAAAAAATTGCAAAAGAGTGTTGACAGTAAAAAAAAGCGTGAT TAGGTTTCGCCCAGCAGACATTGCTGCGGAAGAGAGTGAGCAGAATCGACATCACGCCGACAAGCTTGTTCCGGATGTCC ACCGAAGCGCTAACCACGGTGGAGTCGGGTCCGCTTCTCTCCAAGAAAGCAGTTGTCGTTCCGACTACGCACCCGTGTCG CCGTTCGATGCGGGTGTTTCTGTATCCGTTCCGTCGCGCATCATCTGCGGACGGTCCCGACGACGGCATGCCGTCGCGGG GTTTGGTTCAACTGGGCGTTTCACCTCCATAGTTCACTGA
Upstream 100 bases:
>100_bases TTGTGCATGTCGCCTTGCTCGATCATCCGTCAGTGCACGCGATGGATGCCGCAGTCGGTGCGCGCGGCTGCATGCATGAC GCTCCAGGCGCTCGATAAGT
Downstream 100 bases:
>100_bases CGAGGAGCCAATTACATGGCCACTGCAAAAGCTGCGAAAAAGAAACCCACTGCCAAAAAGGCAGTGAAGAAGACTGCCGC CAAGAAGGCAGTCAAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MRISAHATSEVQPLDKKFSAGGQAASHAVASASLPCGRSVRAGVQAHDLKKTAEKKCFFENAVGRARFSVGRVRPRAGRF AGADMARSDGGWKKNCKRVLTVKKSVIRFRPADIAAEESEQNRHHADKLVPDVHRSANHGGVGSASLQESSCRSDYAPVS PFDAGVSVSVPSRIICGRSRRRHAVAGFGSTGRFTSIVH
Sequences:
>Translated_199_residues MRISAHATSEVQPLDKKFSAGGQAASHAVASASLPCGRSVRAGVQAHDLKKTAEKKCFFENAVGRARFSVGRVRPRAGRF AGADMARSDGGWKKNCKRVLTVKKSVIRFRPADIAAEESEQNRHHADKLVPDVHRSANHGGVGSASLQESSCRSDYAPVS PFDAGVSVSVPSRIICGRSRRRHAVAGFGSTGRFTSIVH >Mature_199_residues MRISAHATSEVQPLDKKFSAGGQAASHAVASASLPCGRSVRAGVQAHDLKKTAEKKCFFENAVGRARFSVGRVRPRAGRF AGADMARSDGGWKKNCKRVLTVKKSVIRFRPADIAAEESEQNRHHADKLVPDVHRSANHGGVGSASLQESSCRSDYAPVS PFDAGVSVSVPSRIICGRSRRRHAVAGFGSTGRFTSIVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21275; Mature: 21275
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISAHATSEVQPLDKKFSAGGQAASHAVASASLPCGRSVRAGVQAHDLKKTAEKKCFFE CCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHH NAVGRARFSVGRVRPRAGRFAGADMARSDGGWKKNCKRVLTVKKSVIRFRPADIAAEESE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH QNRHHADKLVPDVHRSANHGGVGSASLQESSCRSDYAPVSPFDAGVSVSVPSRIICGRSR HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCHHHHCCCC RRHAVAGFGSTGRFTSIVH CCCEEECCCCCCCEEECCC >Mature Secondary Structure MRISAHATSEVQPLDKKFSAGGQAASHAVASASLPCGRSVRAGVQAHDLKKTAEKKCFFE CCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHH NAVGRARFSVGRVRPRAGRFAGADMARSDGGWKKNCKRVLTVKKSVIRFRPADIAAEESE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH QNRHHADKLVPDVHRSANHGGVGSASLQESSCRSDYAPVSPFDAGVSVSVPSRIICGRSR HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCHHHHCCCC RRHAVAGFGSTGRFTSIVH CCCEEECCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA