| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243782
Identifier: 21243782
GI number: 21243782
Start: 3577107
End: 3577460
Strand: Reverse
Name: 21243782
Synonym: XAC3055
Alternate gene names: NA
Gene position: 3577460-3577107 (Counterclockwise)
Preceding gene: 21243783
Following gene: 21243779
Centisome position: 69.12
GC content: 64.41
Gene sequence:
>354_bases ATGTCCCTGTTCGCCATCGTTGCCGGCGTGTGCATCGCACTGCTGCACGTCTACATCCTGGTATTGGAAATGGTGCTGTG GACGCATCCGCTGGGCTTGAAGACCTTCCGCAATAGCCTTGAGAGGGCGCAGGCCACCCGCGTGCTGGCGGCCAACCAGG GGCTCTACAACGGCTTCCTTGCCGCGGGCCTGCTCTGGGGCGCACTGGCCGCTCGCCCCGACGTGCTGAGCTTCTTCCTG GTCTGCGTGGTTGTGGCAGGTTGCTACGGCGCCTACAGCGTCAATCGCCGCATCTTCTTCGTGCAGGCGCTGCCGGCGCT GATCGCCTTGGCGCTGGTGTGGTTGCCGTTCTGA
Upstream 100 bases:
>100_bases CGCCAGAAGCGCACTCACCAGCTCGGTAGTGCAGGTGTGCCGAACAGAGCGACCGCAATCGCGGCTATGCTGGCGGCACC ATTTGTCGAGGCGGTCTGCC
Downstream 100 bases:
>100_bases TCCAGCTGCGGCAGCTGTTCGCTGCACGCAGGTTCGCCGCACGCAGGAGTGGGGCATGGCTGCGATGCGCTCTTGTTCTG TAGCCTCAGCGCCTGGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSLFAIVAGVCIALLHVYILVLEMVLWTHPLGLKTFRNSLERAQATRVLAANQGLYNGFLAAGLLWGALAARPDVLSFFL VCVVVAGCYGAYSVNRRIFFVQALPALIALALVWLPF
Sequences:
>Translated_117_residues MSLFAIVAGVCIALLHVYILVLEMVLWTHPLGLKTFRNSLERAQATRVLAANQGLYNGFLAAGLLWGALAARPDVLSFFL VCVVVAGCYGAYSVNRRIFFVQALPALIALALVWLPF >Mature_116_residues SLFAIVAGVCIALLHVYILVLEMVLWTHPLGLKTFRNSLERAQATRVLAANQGLYNGFLAAGLLWGALAARPDVLSFFLV CVVVAGCYGAYSVNRRIFFVQALPALIALALVWLPF
Specific function: Unknown
COG id: COG3759
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12752; Mature: 12620
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFAIVAGVCIALLHVYILVLEMVLWTHPLGLKTFRNSLERAQATRVLAANQGLYNGFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH AAGLLWGALAARPDVLSFFLVCVVVAGCYGAYSVNRRIFFVQALPALIALALVWLPF HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLFAIVAGVCIALLHVYILVLEMVLWTHPLGLKTFRNSLERAQATRVLAANQGLYNGFL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH AAGLLWGALAARPDVLSFFLVCVVVAGCYGAYSVNRRIFFVQALPALIALALVWLPF HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA