| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gtrB [C]
Identifier: 21243773
GI number: 21243773
Start: 3563931
End: 3564953
Strand: Reverse
Name: gtrB [C]
Synonym: XAC3046
Alternate gene names: 21243773
Gene position: 3564953-3563931 (Counterclockwise)
Preceding gene: 21243774
Following gene: 21243772
Centisome position: 68.88
GC content: 62.95
Gene sequence:
>1023_bases GTGCCGGTTGCGTCCGAACGCCTGACGGTGCTCATCGCGGCCTTCAATGAAGAAACCAGCATTCCCCTGCTGCATCCGCG CCTGTGCGCGGTGTTGGCGCAGCTGCCTGCAGTGCAGACGCACGTGCTGTATGTCGACGACGGCAGCACCGATGGCACCT GGGAGGTGTTGCATGCGCTGACCGAGGCGGATGCGCAGGTGAGTGCGGTGCGGCTGTCGCGTAATTTCGGCAAGGAAGTG GCGATTTCTGCCGGACTGGACCATGTGCTGCCGGGGGCTGTGGTGTTGCTCGATGCCGATGGCCAGGATCCACCGGAACT GATCCCGGAATTCGTTGCGTTGTGGCGTGGCGGCTACGACAACATCTTCGGTACGCGGGTCATTCGCGAGGGCGAGAGTT GGCTCAAACGTAGCGCTGCGCATGCGTTTTATCGTGTGATAAGGCGCTTGTCGCGCACCCCGATTCCTGCCGATACCGGT GATTTCCGCTTGCTGTCGCCACGTGTCGTGCAAGCCTTGCAGCAGCTGCGCGAACGCCACCGTTTCATGAAGGGGCTCTT CGGTTGGGTCGGGTTTCGCCAGGTGGCGCTGCCGTATCGGCGTGAGCCGCGTCTGTCCGGGCACAGTAAGTTCACGGTCT GGCGGCTGTGGAATTTCGCACTAGATGGCATTACCAGTTTTTCCACGGTGCCGCTGCGCGCGGCCACGTATCTGGGCCTG CTTACCGCGCTGCTGGCATTCCTGTTCGGTGCCTGGGTCGTCATCAAGGCTGCGCTGGTGGGCGACCCCGTGGCCGGTTG GCCGACGCTGATGTCGGTGATCCTGTTTCTGGGCGGCGTTCAGCTGATTGCTCTGGGCCTGATTGGCGAATACCTGGGCC GCTTGTACGACGAGGCCAAGCAGCGCCCGTTGTATCTGGTCGATACCCACCGCGGCGCGGTAGGAGTAGGCTGCGATCAC CAGAGCAAGCGCGGAGCGGGCCATGCAGACCGTACGACAGCTGTTGGGGACCAAGCAGGTTGA
Upstream 100 bases:
>100_bases TGCAGCGACGTGCGGGGTGGATCCAGCGGCAGGCGCGCCAGTTGGGCGGCCCTGCCTATCTGCAGGCGCCCTGACGGTGA GCGCCATCGCCACTGCCCAG
Downstream 100 bases:
>100_bases GGTATTTGCCGTTGCCGCCGATGCCGCGGTGATCGAGGCGATTCGCCTGATGGCCGAGAAGGCCATCGGCGCGGTCCTGG TGATGGAAGGGCCGCGCTTG
Product: glucosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MPVASERLTVLIAAFNEETSIPLLHPRLCAVLAQLPAVQTHVLYVDDGSTDGTWEVLHALTEADAQVSAVRLSRNFGKEV AISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTRVIREGESWLKRSAAHAFYRVIRRLSRTPIPADTG DFRLLSPRVVQALQQLRERHRFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPLRAATYLGL LTALLAFLFGAWVVIKAALVGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYLVDTHRGAVGVGCDH QSKRGAGHADRTTAVGDQAG
Sequences:
>Translated_340_residues MPVASERLTVLIAAFNEETSIPLLHPRLCAVLAQLPAVQTHVLYVDDGSTDGTWEVLHALTEADAQVSAVRLSRNFGKEV AISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTRVIREGESWLKRSAAHAFYRVIRRLSRTPIPADTG DFRLLSPRVVQALQQLRERHRFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPLRAATYLGL LTALLAFLFGAWVVIKAALVGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYLVDTHRGAVGVGCDH QSKRGAGHADRTTAVGDQAG >Mature_339_residues PVASERLTVLIAAFNEETSIPLLHPRLCAVLAQLPAVQTHVLYVDDGSTDGTWEVLHALTEADAQVSAVRLSRNFGKEVA ISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTRVIREGESWLKRSAAHAFYRVIRRLSRTPIPADTGD FRLLSPRVVQALQQLRERHRFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPLRAATYLGLL TALLAFLFGAWVVIKAALVGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYLVDTHRGAVGVGCDHQ SKRGAGHADRTTAVGDQAG
Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788692, Length=301, Percent_Identity=41.1960132890365, Blast_Score=273, Evalue=1e-74, Organism=Escherichia coli, GI1788588, Length=305, Percent_Identity=32.1311475409836, Blast_Score=160, Evalue=2e-40, Organism=Drosophila melanogaster, GI24585265, Length=178, Percent_Identity=28.0898876404494, Blast_Score=68, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 37305; Mature: 37173
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVASERLTVLIAAFNEETSIPLLHPRLCAVLAQLPAVQTHVLYVDDGSTDGTWEVLHAL CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH TEADAQVSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYD HHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC NIFGTRVIREGESWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVQALQQLRERH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHH RFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPLRAATYLGL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHH LTALLAFLFGAWVVIKAALVGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAK HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRPLYLVDTHRGAVGVGCDHQSKRGAGHADRTTAVGDQAG CCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PVASERLTVLIAAFNEETSIPLLHPRLCAVLAQLPAVQTHVLYVDDGSTDGTWEVLHAL CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH TEADAQVSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYD HHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC NIFGTRVIREGESWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVQALQQLRERH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHH RFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPLRAATYLGL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHH LTALLAFLFGAWVVIKAALVGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAK HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRPLYLVDTHRGAVGVGCDHQSKRGAGHADRTTAVGDQAG CCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]