| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yceI [C]
Identifier: 21243761
GI number: 21243761
Start: 3550358
End: 3550927
Strand: Direct
Name: yceI [C]
Synonym: XAC3034
Alternate gene names: 21243761
Gene position: 3550358-3550927 (Clockwise)
Preceding gene: 21243760
Following gene: 21243763
Centisome position: 68.6
GC content: 65.09
Gene sequence:
>570_bases ATGTCGTCCAAGTTGTTTGTCTCTCCGATGCTGGTCGCCGCCTCGCTGGTTGCCACGTTCGCCGCCGCACCGGTGCTGGC CGCCGATTACGTGCAGGCGCCGGGCTCTAGCCTGGTATTCGCCAGCAAGTACGACGGCGAAGTGTTCACCGGCAAGTTCC CCGGCTTCGACACCACGCTGAGTTTCGATCCGGCCAACCTTGCCGGGGCCAAGCTCGACGTGCGCATCCCGCTGGCCAGC GCGGTCAGCGGCAACAACGACCGCGATTCCACCCTGCAGGGTCCGGATTTCTTCAACGTCGCCAAGTTCGCCACTGCCCG CTACCGCGCCGACAAGTTCCGCGCCCTGGGCGGCAACCAATACGCTGCCGATGGCACCTTGGAACTGCGCGGTGTCAGCA AGCCGGTGACGCTGACCTTTACCTGGACGCCCGGCGCGCAGCCGGTGCTGGCCGGCAAGGCTGTCGTCAAGCGACTGGAC TTTGGCGTGGGCGGCGGCGACTGGGCCGACACCAAGACCATTCCCAACGAAACCGCGATCAGCACCAAGGTCGTGTTGAA GGCGAAGTAA
Upstream 100 bases:
>100_bases ATGCCGGCGCTGCGTTTTACCACCACCTATTCCAGCGCGACGCCACCCTGGCGCGGATGTTGCCGCGTGGCTGGCTGGCT CCCAAACCATAAGGATTTCC
Downstream 100 bases:
>100_bases CGCCACAGGCTGCAACCGGACGCAGCCACTGAGCGGCGGACTACTCGTCGGGTCCGCCGCTTCTTTTATGCCCACATGGC GTGGGATAGCGAGCGTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSSKLFVSPMLVAASLVATFAAAPVLAADYVQAPGSSLVFASKYDGEVFTGKFPGFDTTLSFDPANLAGAKLDVRIPLAS AVSGNNDRDSTLQGPDFFNVAKFATARYRADKFRALGGNQYAADGTLELRGVSKPVTLTFTWTPGAQPVLAGKAVVKRLD FGVGGGDWADTKTIPNETAISTKVVLKAK
Sequences:
>Translated_189_residues MSSKLFVSPMLVAASLVATFAAAPVLAADYVQAPGSSLVFASKYDGEVFTGKFPGFDTTLSFDPANLAGAKLDVRIPLAS AVSGNNDRDSTLQGPDFFNVAKFATARYRADKFRALGGNQYAADGTLELRGVSKPVTLTFTWTPGAQPVLAGKAVVKRLD FGVGGGDWADTKTIPNETAISTKVVLKAK >Mature_188_residues SSKLFVSPMLVAASLVATFAAAPVLAADYVQAPGSSLVFASKYDGEVFTGKFPGFDTTLSFDPANLAGAKLDVRIPLASA VSGNNDRDSTLQGPDFFNVAKFATARYRADKFRALGGNQYAADGTLELRGVSKPVTLTFTWTPGAQPVLAGKAVVKRLDF GVGGGDWADTKTIPNETAISTKVVLKAK
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=132, Percent_Identity=34.8484848484849, Blast_Score=60, Evalue=6e-11,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 19784; Mature: 19652
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKLFVSPMLVAASLVATFAAAPVLAADYVQAPGSSLVFASKYDGEVFTGKFPGFDTTL CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCEE SFDPANLAGAKLDVRIPLASAVSGNNDRDSTLQGPDFFNVAKFATARYRADKFRALGGNQ EECCCCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE YAADGTLELRGVSKPVTLTFTWTPGAQPVLAGKAVVKRLDFGVGGGDWADTKTIPNETAI EECCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE STKVVLKAK EEEEEEEEC >Mature Secondary Structure SSKLFVSPMLVAASLVATFAAAPVLAADYVQAPGSSLVFASKYDGEVFTGKFPGFDTTL CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCEE SFDPANLAGAKLDVRIPLASAVSGNNDRDSTLQGPDFFNVAKFATARYRADKFRALGGNQ EECCCCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE YAADGTLELRGVSKPVTLTFTWTPGAQPVLAGKAVVKRLDFGVGGGDWADTKTIPNETAI EECCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE STKVVLKAK EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA