| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243733
Identifier: 21243733
GI number: 21243733
Start: 3517278
End: 3518432
Strand: Reverse
Name: 21243733
Synonym: XAC3006
Alternate gene names: NA
Gene position: 3518432-3517278 (Counterclockwise)
Preceding gene: 21243734
Following gene: 21243732
Centisome position: 67.98
GC content: 67.71
Gene sequence:
>1155_bases TTGGCCAGGTGCGCGACGTGCAGCAGGTTCCGCGCAGCGACAGCTGATCCATCGCACGGCACAGGATGCGCCATGATCAT CGTTGGACGGCTGTTGCGGGTCCTTCGGCGCCACGTGCGCCGCGTCAGCTGGGGCACGGTGGCGCTCGCACTGCTGGCGC ACATGGGGCTGAGCTGGTTGCTGCTGCTGTGGGCCGGCGAGCAGAAGCTCGTCGGCCTGGACGCGTTTCCGTACTACTAC ATGACCACTGCCACCACCATCGGCTACGGCGACCTGTCGCCGGGCTCGGCGGCCGGGCACTATATCGCCGCGTTCGTGTT GATGCCGGGCGCGGTGGCGTTGTTCGCCACGGTGCTGGCCAAGACCAGCGGGGTGCTCATCACTTTCTGGAGGCGCCACC ACATGGGCAAGATGGCCTATGCCGATCTGCGCGGGCACACCATTCTGATCGGCTGGCAGGGCGCTGCCTCCACGCGCCTG CTGGAATTGCTGCTGTCCGATACCGCCACCGATGACGAAGGCGTGGTGCTGATTGCCGAGGGCGTGGCGGAAAATCCGAT GCCCGACCACATGCGCTTCATCGTCGCCGAGTCGTACACGCATACCGAGGTGTACCTGCGGGCCGGCATTGCCGGCGCGG CGCGGGTGATCGTCAACCCGCCCTCCGACGACCAGACCCTGGCGGCGGTGTTCGCGTTGATGGCGCATGCGCCGGCCGCG CATATCGTGGCGCACTTCGATTCGGCCAGCGCGGCGCGATTGGTCAACTGCCATTACCCAGCCATCGAGTGCACGCGTCC GATGACCGCCGAGATCCTGGCACGTGCGGCGCAGGATCCGGGCAGTGCGGCGATCACCGCCGAGCTGCTGTCGGTAGACG ATGGCCCCACCCAGTTCAGTCTTGCAGTGCCTGCGAGTGTGCAACCACTGGATTACAGCCGGCTTGCGGCCGATTTCGGC CAGCGTGGCGCATTGCTGCTGGGCCTGCGCGCGCCCGACGGCGCGTTGCGCTTGAACCCGCCAGCACGTACCGCCGTCGC CGCCGGTGCCATGCTGTATTACCTGGCCGAGCAGCGCGTGCCGGCGCACGCCATCGCCTGGCAGGCCCTGCGCAGCGAGG CCGCTTCCCTTCCCCCATCGCCACAAGGTGTCTGA
Upstream 100 bases:
>100_bases CTGATGGAAGGCGAATCCAACGCCGCTGCGGTGCTGGCGCGCTTCAAGAAGCCGGCTGCGCAGCTCGGCCATGAGAACAC CGGCGGCACCGCGCCACTGA
Downstream 100 bases:
>100_bases CGATGAGTTTTTTCAGCAAGTTGTTCGGTCAACCGCAACCGCCGCCGCTGCCCACGTCCGGGAGTGGCGCGATCGGTCAC ACGCTGCCGCTGGGGCTGCG
Product: potassium channel-like protein
Products: NA
Alternate protein names: Potassium Channel Related Protein; Ion Transport 2 Domain-Containing Protein; Ion Transport 2 Domain Protein; Potassium Channel-Like Protein; Transport Protein Of Voltage-Gated Ion Channel Superfamily; Voltage-Gated Ion Channel Superfamily Protein; Cation Transporter Protein; Ion Channel Protein; Resembles Potassium Channels; Transmembrane Cation Transporter
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MARCATCSRFRAATADPSHGTGCAMIIVGRLLRVLRRHVRRVSWGTVALALLAHMGLSWLLLLWAGEQKLVGLDAFPYYY MTTATTIGYGDLSPGSAAGHYIAAFVLMPGAVALFATVLAKTSGVLITFWRRHHMGKMAYADLRGHTILIGWQGAASTRL LELLLSDTATDDEGVVLIAEGVAENPMPDHMRFIVAESYTHTEVYLRAGIAGAARVIVNPPSDDQTLAAVFALMAHAPAA HIVAHFDSASAARLVNCHYPAIECTRPMTAEILARAAQDPGSAAITAELLSVDDGPTQFSLAVPASVQPLDYSRLAADFG QRGALLLGLRAPDGALRLNPPARTAVAAGAMLYYLAEQRVPAHAIAWQALRSEAASLPPSPQGV
Sequences:
>Translated_384_residues MARCATCSRFRAATADPSHGTGCAMIIVGRLLRVLRRHVRRVSWGTVALALLAHMGLSWLLLLWAGEQKLVGLDAFPYYY MTTATTIGYGDLSPGSAAGHYIAAFVLMPGAVALFATVLAKTSGVLITFWRRHHMGKMAYADLRGHTILIGWQGAASTRL LELLLSDTATDDEGVVLIAEGVAENPMPDHMRFIVAESYTHTEVYLRAGIAGAARVIVNPPSDDQTLAAVFALMAHAPAA HIVAHFDSASAARLVNCHYPAIECTRPMTAEILARAAQDPGSAAITAELLSVDDGPTQFSLAVPASVQPLDYSRLAADFG QRGALLLGLRAPDGALRLNPPARTAVAAGAMLYYLAEQRVPAHAIAWQALRSEAASLPPSPQGV >Mature_383_residues ARCATCSRFRAATADPSHGTGCAMIIVGRLLRVLRRHVRRVSWGTVALALLAHMGLSWLLLLWAGEQKLVGLDAFPYYYM TTATTIGYGDLSPGSAAGHYIAAFVLMPGAVALFATVLAKTSGVLITFWRRHHMGKMAYADLRGHTILIGWQGAASTRLL ELLLSDTATDDEGVVLIAEGVAENPMPDHMRFIVAESYTHTEVYLRAGIAGAARVIVNPPSDDQTLAAVFALMAHAPAAH IVAHFDSASAARLVNCHYPAIECTRPMTAEILARAAQDPGSAAITAELLSVDDGPTQFSLAVPASVQPLDYSRLAADFGQ RGALLLGLRAPDGALRLNPPARTAVAAGAMLYYLAEQRVPAHAIAWQALRSEAASLPPSPQGV
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40779; Mature: 40647
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARCATCSRFRAATADPSHGTGCAMIIVGRLLRVLRRHVRRVSWGTVALALLAHMGLSWL CCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLLWAGEQKLVGLDAFPYYYMTTATTIGYGDLSPGSAAGHYIAAFVLMPGAVALFATVLA HHHCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH KTSGVLITFWRRHHMGKMAYADLRGHTILIGWQGAASTRLLELLLSDTATDDEGVVLIAE HCCCEEEEEHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEC GVAENPMPDHMRFIVAESYTHTEVYLRAGIAGAARVIVNPPSDDQTLAAVFALMAHAPAA CCCCCCCCHHHEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCHH HIVAHFDSASAARLVNCHYPAIECTRPMTAEILARAAQDPGSAAITAELLSVDDGPTQFS HHEEECCCCCCEEEEECCCCCEECCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEE LAVPASVQPLDYSRLAADFGQRGALLLGLRAPDGALRLNPPARTAVAAGAMLYYLAEQRV EECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCC PAHAIAWQALRSEAASLPPSPQGV CHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ARCATCSRFRAATADPSHGTGCAMIIVGRLLRVLRRHVRRVSWGTVALALLAHMGLSWL CCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLLWAGEQKLVGLDAFPYYYMTTATTIGYGDLSPGSAAGHYIAAFVLMPGAVALFATVLA HHHCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH KTSGVLITFWRRHHMGKMAYADLRGHTILIGWQGAASTRLLELLLSDTATDDEGVVLIAE HCCCEEEEEHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEC GVAENPMPDHMRFIVAESYTHTEVYLRAGIAGAARVIVNPPSDDQTLAAVFALMAHAPAA CCCCCCCCHHHEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCHH HIVAHFDSASAARLVNCHYPAIECTRPMTAEILARAAQDPGSAAITAELLSVDDGPTQFS HHEEECCCCCCEEEEECCCCCEECCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEE LAVPASVQPLDYSRLAADFGQRGALLLGLRAPDGALRLNPPARTAVAAGAMLYYLAEQRV EECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCC PAHAIAWQALRSEAASLPPSPQGV CHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA