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The map label for this gene is ygiB [C]

Identifier: 21243730

GI number: 21243730

Start: 3515577

End: 3516149

Strand: Reverse

Name: ygiB [C]

Synonym: XAC3003

Alternate gene names: 21243730

Gene position: 3516149-3515577 (Counterclockwise)

Preceding gene: 21243731

Following gene: 21243729

Centisome position: 67.94

GC content: 66.32

Gene sequence:

>573_bases
ATGAAGCGATCACGCAATCTCAAACTCACCTTGATGGCCGCGCTGCCGGCCGCCTTCGTCACCGGCTGCGGCTCGGAGCC
GGAGACCGGTGTGGTGCTGCAGTCGGCCTCGGACTGTTACCAGATCAAGCAGGAACAGTCCGATATCCAGCAATGCCTCA
AGGCCTACGACGAGGCGGTGGCCAAGCATCAGCAGGCCGCGCCGCGCTTCACCACGCGCTACGAGTGCGATGCGCAATTC
GGCAGCTGCACGGCGATCACCAATCCGCAAGGGCAGCAGAGCTGGATCCCGCCGATGGGCGGGTTCCTGCTGGGCTACGC
CCTGGGCAATATGAGCGGCGGCGGTTATCGCTATGGCGGCTCGATTCCGCTGTACCGCGATTACCGTAGCGGCGGTTACT
ACAAGCCCAATGGCGATCTGGCCAGCAACCGCATTGGCACGGTCCGTGGGCGCAGCGGCGCCATCGACATGCCCACGCGC
GCCATCACCGTGTCGCGTTCGGGCTTCGGTTCCAGCGCGGCCGCGCGCAGTTCGTTCGGCAGCGGCGGCCGCAGCTCGGG
CTTCGGCGGCTGA

Upstream 100 bases:

>100_bases
CACCGACAACATCACCGCCGCCGGTATCTTTTCGGCCGGCGTGTCGATCGCGGTGGGGCTGATCAACGCCGCCGCGATCA
CGCCGTAACGGAGCGCAGGC

Downstream 100 bases:

>100_bases
CATGCAACGCATCCTGATCCCCGAACGCGCGGATTGGCGCACGCAGGCCGAATCGCTGGGCTTCCACTTCCACACCATCG
ACGGCGAGCCGTATTGGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKQEQSDIQQCLKAYDEAVAKHQQAAPRFTTRYECDAQF
GSCTAITNPQGQQSWIPPMGGFLLGYALGNMSGGGYRYGGSIPLYRDYRSGGYYKPNGDLASNRIGTVRGRSGAIDMPTR
AITVSRSGFGSSAAARSSFGSGGRSSGFGG

Sequences:

>Translated_190_residues
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKQEQSDIQQCLKAYDEAVAKHQQAAPRFTTRYECDAQF
GSCTAITNPQGQQSWIPPMGGFLLGYALGNMSGGGYRYGGSIPLYRDYRSGGYYKPNGDLASNRIGTVRGRSGAIDMPTR
AITVSRSGFGSSAAARSSFGSGGRSSGFGG
>Mature_190_residues
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKQEQSDIQQCLKAYDEAVAKHQQAAPRFTTRYECDAQF
GSCTAITNPQGQQSWIPPMGGFLLGYALGNMSGGGYRYGGSIPLYRDYRSGGYYKPNGDLASNRIGTVRGRSGAIDMPTR
AITVSRSGFGSSAAARSSFGSGGRSSGFGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693179, Length=212, Percent_Identity=28.3018867924528, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20097; Mature: 20097

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKQEQSDIQQCLKAYDEAV
CCCCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AKHQQAAPRFTTRYECDAQFGSCTAITNPQGQQSWIPPMGGFLLGYALGNMSGGGYRYGG
HHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECC
SIPLYRDYRSGGYYKPNGDLASNRIGTVRGRSGAIDMPTRAITVSRSGFGSSAAARSSFG
CCCEEEECCCCCEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHCCC
SGGRSSGFGG
CCCCCCCCCC
>Mature Secondary Structure
MKRSRNLKLTLMAALPAAFVTGCGSEPETGVVLQSASDCYQIKQEQSDIQQCLKAYDEAV
CCCCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AKHQQAAPRFTTRYECDAQFGSCTAITNPQGQQSWIPPMGGFLLGYALGNMSGGGYRYGG
HHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECC
SIPLYRDYRSGGYYKPNGDLASNRIGTVRGRSGAIDMPTRAITVSRSGFGSSAAARSSFG
CCCEEEECCCCCEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHCCC
SGGRSSGFGG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA