| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243724
Identifier: 21243724
GI number: 21243724
Start: 3504431
End: 3505189
Strand: Reverse
Name: 21243724
Synonym: XAC2997
Alternate gene names: NA
Gene position: 3505189-3504431 (Counterclockwise)
Preceding gene: 21243725
Following gene: 21243723
Centisome position: 67.73
GC content: 65.48
Gene sequence:
>759_bases ATGACGCGATACGCAGTGCTCAACAACGTGGCGCATCACGACCTGCGCGTGATCCTGCGCTTTGGTGCGGAATTCGGCGA TGCGGTGGGCGTTGTGCCGGCCTTCGTGACCGAATATGCCGAGCTGCAACGCGAGTACCCGCTGTTCTTCCGCAAGGATC CGGCCGGGAGTGGTTACCGGCCGGTGGCGCTGCTGGGCTTCGCACAGGATGAAAACCTGTTTCTGCAGGACGGGCGCTGG AATGCCAGCTACCTGCCGGGCATCGTTGCCAAGGGACCGTTCCTGATCGGTTTCCAGGAGCAACACGTCGACGGGGCCTT GGTGCAGGAGCCGGTGATCCATGTCGACCTGGAACATCCGCGCATCAGCCGCAGCGAGGGCGAGGCGGTGTTCTTGCCGC AAGGCGGCCACAGCCCGTATCTGGAACACATCATCGGCGTGTTGCGCGGCATCCGCGATGGGCTGGACGCGGGGCAAGCG ATGGCGGCCGCCTTCGAGGCGCTCGGCCTGATCCAGCCGGTGCGGCTGGACGTTGCGCTGGATGCTAGCCATGCGACGCA GTTGCAGGGCTTGTTCGCCATCGACCGCGAGCGGCTTGCCGCCCTGGATGCGCAAGCGCTGCAGCAGTTGCATCAGGCCG GCTATCTGGAAGGCGCCTTCCTGATGCTGGCATCGCTGCACAATGTGCGCCGGCTGATGGCCGAAAAGCAGCGCCGTCTG CAGCAGTCGCACAGCGCCCCCGTTGCCGCGTACGCCTGA
Upstream 100 bases:
>100_bases TTTTGGCAATGCTCAGCATCGATATGCGCGCGGGGAATGCGTGCGACCGAATTCCTCCATGACTGCAGTCCTCCGCGACG GACGGCTGCTGGAGCTTTAG
Downstream 100 bases:
>100_bases GCGTATGGCCGCACGTGCAACCGATCCGTCTGTCGCCGCAGGCGCCGCCATCGCCATTGCCGAGCGCAGCGATTGCGGCC CTGATGGATTGCCGCTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: SapC Related Protein; SapC-Related Protein; SapC-Like Protein; SapC Protein; SapC Superfamily Protein; Sapc Family Protein
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTRYAVLNNVAHHDLRVILRFGAEFGDAVGVVPAFVTEYAELQREYPLFFRKDPAGSGYRPVALLGFAQDENLFLQDGRW NASYLPGIVAKGPFLIGFQEQHVDGALVQEPVIHVDLEHPRISRSEGEAVFLPQGGHSPYLEHIIGVLRGIRDGLDAGQA MAAAFEALGLIQPVRLDVALDASHATQLQGLFAIDRERLAALDAQALQQLHQAGYLEGAFLMLASLHNVRRLMAEKQRRL QQSHSAPVAAYA
Sequences:
>Translated_252_residues MTRYAVLNNVAHHDLRVILRFGAEFGDAVGVVPAFVTEYAELQREYPLFFRKDPAGSGYRPVALLGFAQDENLFLQDGRW NASYLPGIVAKGPFLIGFQEQHVDGALVQEPVIHVDLEHPRISRSEGEAVFLPQGGHSPYLEHIIGVLRGIRDGLDAGQA MAAAFEALGLIQPVRLDVALDASHATQLQGLFAIDRERLAALDAQALQQLHQAGYLEGAFLMLASLHNVRRLMAEKQRRL QQSHSAPVAAYA >Mature_251_residues TRYAVLNNVAHHDLRVILRFGAEFGDAVGVVPAFVTEYAELQREYPLFFRKDPAGSGYRPVALLGFAQDENLFLQDGRWN ASYLPGIVAKGPFLIGFQEQHVDGALVQEPVIHVDLEHPRISRSEGEAVFLPQGGHSPYLEHIIGVLRGIRDGLDAGQAM AAAFEALGLIQPVRLDVALDASHATQLQGLFAIDRERLAALDAQALQQLHQAGYLEGAFLMLASLHNVRRLMAEKQRRLQ QSHSAPVAAYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27707; Mature: 27576
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYAVLNNVAHHDLRVILRFGAEFGDAVGVVPAFVTEYAELQREYPLFFRKDPAGSGYR CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC PVALLGFAQDENLFLQDGRWNASYLPGIVAKGPFLIGFQEQHVDGALVQEPVIHVDLEHP CEEEEEECCCCCEEEECCCCCCHHCCCHHHCCCEEEEEHHHCCCCHHHHCCEEEEECCCC RISRSEGEAVFLPQGGHSPYLEHIIGVLRGIRDGLDAGQAMAAAFEALGLIQPVRLDVAL CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEE DASHATQLQGLFAIDRERLAALDAQALQQLHQAGYLEGAFLMLASLHNVRRLMAEKQRRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QQSHSAPVAAYA HHHCCCCCCCCC >Mature Secondary Structure TRYAVLNNVAHHDLRVILRFGAEFGDAVGVVPAFVTEYAELQREYPLFFRKDPAGSGYR CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC PVALLGFAQDENLFLQDGRWNASYLPGIVAKGPFLIGFQEQHVDGALVQEPVIHVDLEHP CEEEEEECCCCCEEEECCCCCCHHCCCHHHCCCEEEEEHHHCCCCHHHHCCEEEEECCCC RISRSEGEAVFLPQGGHSPYLEHIIGVLRGIRDGLDAGQAMAAAFEALGLIQPVRLDVAL CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEE DASHATQLQGLFAIDRERLAALDAQALQQLHQAGYLEGAFLMLASLHNVRRLMAEKQRRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QQSHSAPVAAYA HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA