| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243717
Identifier: 21243717
GI number: 21243717
Start: 3496502
End: 3497884
Strand: Reverse
Name: 21243717
Synonym: XAC2990
Alternate gene names: NA
Gene position: 3497884-3496502 (Counterclockwise)
Preceding gene: 21243722
Following gene: 21243715
Centisome position: 67.58
GC content: 61.24
Gene sequence:
>1383_bases GTGAACCCTTCGTTCGTTTTCACGGCGGTGGACGACATCTCTGGCTGCTTGCCAGGCGGGGATATCACCAGAATCTCTGC GCACTCACGTGGAACATGTCGCATGCGACCCACTTCAACTTCTTTTCCAAGTCTGCCGCACGCGCAATCGCGCGAGAGCG ATAGCTGCGTGCCTGTCTCCGCTACCGCTTTCCCCTGGCACGTGCGCGAGAGCGCCAGTGCGTTTCCCGGTCTCAGCGCT GCGCCGGTCAAACGCGTACGCAAAGTGACACAATCAATCGTGGCTGATGCGTCGCGGTCATCTGGCATGCGTCTGCCGCA GGTAGATACCCAGGTATGCGATCTCGTCAGCGCGATTGCCCAAGTGGATCATGCATCGGCGCAGCCACACGGACAGGATC CGCAATGGGAAATGCGCTGCCGCACCGTACTCGAAAGCATGCGCGCATGCGCAGGCGAATCCTACAAGGGCGATCCGGCG ACGGTGGCTGACATCGATGGGTTGCATCTCAATGTGCCGATGTCCACGCGGCGGTTGAAACTATGGGAGCGAGAGACCGA CGACGTGATTGTCGCGGTGCTGGGTTTTTCCGGTACATGCCTGGATGCGACCGACGACCTGTTATGCGACATGAAAAGCC TGATCGCGCAGGTACACGTCAACGTCTTCGACGAGCGCCTTCCGACCTTGGGCAAGGTTGGAGCGGGCTGGCAGGAATGG TGGCAGTCCGAAGCTCAGTTGCCGCGCGCCGACGGAACCGTCATGAAGGACGTGCTGAAACGCTACACGAATCGCGCGCG GGAGAGCGGCAAGGCGTTGTCGATGTCATTGACGGGACACAGTCTGGGCGCAGCAGCGGCCACGGTCGCCGGTTTCGACA TCACGCACTTTTTGCGCGCGGCCGGAGCCCCGGGCAAGATCAGCATTTATTCATTCAATCCGCCGCGGCTAGGGCCAGCC GGCGCCGACAAACACTATATGCAAAGCTTGAGATCGAAGTACAGCGAGCTGCGATTCACGCTGCGCCAGTTTACGCGCGC TCTGGATCCGATCCAGTCGGTGCCCTTTTTCATGCATCACCCGCACTGGGATCACCCCGGGGCTGCTGACGAGCGCGCCG GCAGCACCAGCGGTGATCGCTTCGCTCAGTTCATCACCGTGACGGACGGCCCGGCCAGCACTGTCAACCCGGCGGACAAT CACGAATTGACGTTGTGGCGACCTTATTTCCTGTCCAAGATCGAGCCGGCCGATCTGCAGCGCATCTTTTCTCCCATGGA AGTGCCACAAGGGACATCCGGAGACCGGCGTCTTCCCCGCAGGCGACTGTTCGCCTCGTTGCTGCCGTACCGCGAGCCGC CGGCCAATAGCCGGCCGGATTAA
Upstream 100 bases:
>100_bases GCAGCTTGGTGTCTTCAATCCACGTGATCCTCGTGGTGGCGATCAGCGCTCCTAGGGCCCTGGGAGACCTCACCCCGGCC TGGAGGGATGCACAGCGATA
Downstream 100 bases:
>100_bases ATAGCCGGCAATCAATTGCGAATAAATTTTCTAGGCCAAGAGGGATTTTCTAAAGCGTTATCAATCCTGACCCCTGGCCA TGAAGATCGCTCGCTGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MNPSFVFTAVDDISGCLPGGDITRISAHSRGTCRMRPTSTSFPSLPHAQSRESDSCVPVSATAFPWHVRESASAFPGLSA APVKRVRKVTQSIVADASRSSGMRLPQVDTQVCDLVSAIAQVDHASAQPHGQDPQWEMRCRTVLESMRACAGESYKGDPA TVADIDGLHLNVPMSTRRLKLWERETDDVIVAVLGFSGTCLDATDDLLCDMKSLIAQVHVNVFDERLPTLGKVGAGWQEW WQSEAQLPRADGTVMKDVLKRYTNRARESGKALSMSLTGHSLGAAAATVAGFDITHFLRAAGAPGKISIYSFNPPRLGPA GADKHYMQSLRSKYSELRFTLRQFTRALDPIQSVPFFMHHPHWDHPGAADERAGSTSGDRFAQFITVTDGPASTVNPADN HELTLWRPYFLSKIEPADLQRIFSPMEVPQGTSGDRRLPRRRLFASLLPYREPPANSRPD
Sequences:
>Translated_460_residues MNPSFVFTAVDDISGCLPGGDITRISAHSRGTCRMRPTSTSFPSLPHAQSRESDSCVPVSATAFPWHVRESASAFPGLSA APVKRVRKVTQSIVADASRSSGMRLPQVDTQVCDLVSAIAQVDHASAQPHGQDPQWEMRCRTVLESMRACAGESYKGDPA TVADIDGLHLNVPMSTRRLKLWERETDDVIVAVLGFSGTCLDATDDLLCDMKSLIAQVHVNVFDERLPTLGKVGAGWQEW WQSEAQLPRADGTVMKDVLKRYTNRARESGKALSMSLTGHSLGAAAATVAGFDITHFLRAAGAPGKISIYSFNPPRLGPA GADKHYMQSLRSKYSELRFTLRQFTRALDPIQSVPFFMHHPHWDHPGAADERAGSTSGDRFAQFITVTDGPASTVNPADN HELTLWRPYFLSKIEPADLQRIFSPMEVPQGTSGDRRLPRRRLFASLLPYREPPANSRPD >Mature_460_residues MNPSFVFTAVDDISGCLPGGDITRISAHSRGTCRMRPTSTSFPSLPHAQSRESDSCVPVSATAFPWHVRESASAFPGLSA APVKRVRKVTQSIVADASRSSGMRLPQVDTQVCDLVSAIAQVDHASAQPHGQDPQWEMRCRTVLESMRACAGESYKGDPA TVADIDGLHLNVPMSTRRLKLWERETDDVIVAVLGFSGTCLDATDDLLCDMKSLIAQVHVNVFDERLPTLGKVGAGWQEW WQSEAQLPRADGTVMKDVLKRYTNRARESGKALSMSLTGHSLGAAAATVAGFDITHFLRAAGAPGKISIYSFNPPRLGPA GADKHYMQSLRSKYSELRFTLRQFTRALDPIQSVPFFMHHPHWDHPGAADERAGSTSGDRFAQFITVTDGPASTVNPADN HELTLWRPYFLSKIEPADLQRIFSPMEVPQGTSGDRRLPRRRLFASLLPYREPPANSRPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50460; Mature: 50460
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSFVFTAVDDISGCLPGGDITRISAHSRGTCRMRPTSTSFPSLPHAQSRESDSCVPVS CCCCEEEEEHHHHCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEE ATAFPWHVRESASAFPGLSAAPVKRVRKVTQSIVADASRSSGMRLPQVDTQVCDLVSAIA CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH QVDHASAQPHGQDPQWEMRCRTVLESMRACAGESYKGDPATVADIDGLHLNVPMSTRRLK HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCHHHHH LWERETDDVIVAVLGFSGTCLDATDDLLCDMKSLIAQVHVNVFDERLPTLGKVGAGWQEW HHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHH WQSEAQLPRADGTVMKDVLKRYTNRARESGKALSMSLTGHSLGAAAATVAGFDITHFLRA HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH AGAPGKISIYSFNPPRLGPAGADKHYMQSLRSKYSELRFTLRQFTRALDPIQSVPFFMHH CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC PHWDHPGAADERAGSTSGDRFAQFITVTDGPASTVNPADNHELTLWRPYFLSKIEPADLQ CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECHHHHCCCCHHHHH RIFSPMEVPQGTSGDRRLPRRRLFASLLPYREPPANSRPD HHHCHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNPSFVFTAVDDISGCLPGGDITRISAHSRGTCRMRPTSTSFPSLPHAQSRESDSCVPVS CCCCEEEEEHHHHCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEE ATAFPWHVRESASAFPGLSAAPVKRVRKVTQSIVADASRSSGMRLPQVDTQVCDLVSAIA CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH QVDHASAQPHGQDPQWEMRCRTVLESMRACAGESYKGDPATVADIDGLHLNVPMSTRRLK HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCHHHHH LWERETDDVIVAVLGFSGTCLDATDDLLCDMKSLIAQVHVNVFDERLPTLGKVGAGWQEW HHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHH WQSEAQLPRADGTVMKDVLKRYTNRARESGKALSMSLTGHSLGAAAATVAGFDITHFLRA HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH AGAPGKISIYSFNPPRLGPAGADKHYMQSLRSKYSELRFTLRQFTRALDPIQSVPFFMHH CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC PHWDHPGAADERAGSTSGDRFAQFITVTDGPASTVNPADNHELTLWRPYFLSKIEPADLQ CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECHHHHCCCCHHHHH RIFSPMEVPQGTSGDRRLPRRRLFASLLPYREPPANSRPD HHHCHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA