| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21243704
Identifier: 21243704
GI number: 21243704
Start: 3478881
End: 3479273
Strand: Direct
Name: 21243704
Synonym: XAC2977
Alternate gene names: NA
Gene position: 3478881-3479273 (Clockwise)
Preceding gene: 21243703
Following gene: 21243705
Centisome position: 67.22
GC content: 65.39
Gene sequence:
>393_bases ATGGCCTGTGGCATTCTCCTCATTACTCATCCCGGCATCGGCGCAGCGTTGTTGAACGTGGCGACGGGGCTATTGCGGCA GTTGCCGTTGAAGACCGAAGCATTCGATGTGCCGTTCGATGCAGACCTGGACGCGTTGCTGCCCCAGGCATCGTCGGCGA TGCGCCGGGTCGACAGCGGCGACGGCGTGCTGGTCATGACCGACCTGTACGGCGCCAGCCCCAGCAATCTGGCCAACCGT CTGGCCAAGCTGGGCACCCCGGTTCGCCGGGTGTCCGCGCTGAGCCTGCCGATGCTGCTGCGCGTGATGAACTACCCCGA ACAAGGACTGCAGGAGCTGCCCGCCACTGCGGCGGCCGGTACCCGCAACGGAGCGATCATCGACGATGCTTGA
Upstream 100 bases:
>100_bases GCCACGTCGCTGCAGCGGTCCTAAACGTCTATTCAGTCCGCAACGCATCTGTGCGGGCAAACGCTATCGCGCAGTCATGC TGACCTGTTAACGTTTCGGC
Downstream 100 bases:
>100_bases ACGCGAACTCATAGTTTCCAACCGACTCGGACTGCATGCGCGGGCCACCGCCAAGCTGGTGCAGACGCTGTCGTCGTATC GCAGCAACGCCACCCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: IIA Component Of Sugar Transport PTS System; Protein-N P-Phosphohistidine-Sugar Phosphotransferase; PTS System Fructose-Specific IIA Component; PTS System Fructose IIA Component; IIa Component Of Sugar Transport PTS System; PTS System Fructose Subfamily Transporter Subunit IIA; Pts System IIa Component; Phosphotransferase Mannose/Fructose-Specific Component IIA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MACGILLITHPGIGAALLNVATGLLRQLPLKTEAFDVPFDADLDALLPQASSAMRRVDSGDGVLVMTDLYGASPSNLANR LAKLGTPVRRVSALSLPMLLRVMNYPEQGLQELPATAAAGTRNGAIIDDA
Sequences:
>Translated_130_residues MACGILLITHPGIGAALLNVATGLLRQLPLKTEAFDVPFDADLDALLPQASSAMRRVDSGDGVLVMTDLYGASPSNLANR LAKLGTPVRRVSALSLPMLLRVMNYPEQGLQELPATAAAGTRNGAIIDDA >Mature_129_residues ACGILLITHPGIGAALLNVATGLLRQLPLKTEAFDVPFDADLDALLPQASSAMRRVDSGDGVLVMTDLYGASPSNLANRL AKLGTPVRRVSALSLPMLLRVMNYPEQGLQELPATAAAGTRNGAIIDDA
Specific function: Unknown
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13565; Mature: 13434
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACGILLITHPGIGAALLNVATGLLRQLPLKTEAFDVPFDADLDALLPQASSAMRRVDSG CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC DGVLVMTDLYGASPSNLANRLAKLGTPVRRVSALSLPMLLRVMNYPEQGLQELPATAAAG CCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCC TRNGAIIDDA CCCCCEECCC >Mature Secondary Structure ACGILLITHPGIGAALLNVATGLLRQLPLKTEAFDVPFDADLDALLPQASSAMRRVDSG CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC DGVLVMTDLYGASPSNLANRLAKLGTPVRRVSALSLPMLLRVMNYPEQGLQELPATAAAG CCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCC TRNGAIIDDA CCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA